mRNA_Ecto-sp6_S_contig100.746.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.746.1 vs. uniprot
Match: D7FRM6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM6_ECTSI) HSP 1 Score: 355 bits (911), Expect = 8.250e-119 Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 1 Query: 1 MSDQATDKHAVADDGEVGIEEEVRDFAARFARLVVSSAFREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGRNPGGSSSLRPGERSALGSYVAEAELSLRGSQRLGAQLEKDAGMLRSKVFPALLENARKLHALYVAIDRVTEEVMPEVDATVKRMEKAVYDLEEMRKEQVDTRAPQGSFGLGLALGAGLWFPQMKEKGVTVPEVFDTDKLFRVEEGGLAPL 723
MSDQATDK+AVADDGEVGIEEEVRDFAARFARLVVS +FREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGRNPGGSSSLRPGERSALGSYVAEAELSLRGSQRLGAQLEKDAGMLRSKVFPALLENARKLHALYVAIDRVTEEVMPEVDATVKRMEKAVYDLEEMRKEQVDTRAPQGSFGLGLALGAGLWFPQMKEKGVTVPEVFDTDKLFRVEEGGLAPL
Sbjct: 1 MSDQATDKNAVADDGEVGIEEEVRDFAARFARLVVSRSFREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGRNPGGSSSLRPGERSALGSYVAEAELSLRGSQRLGAQLEKDAGMLRSKVFPALLENARKLHALYVAIDRVTEEVMPEVDATVKRMEKAVYDLEEMRKEQVDTRAPQGSFGLGLALGAGLWFPQMKEKGVTVPEVFDTDKLFRVEEGGLAPL 241 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.746.1 >prot_Ecto-sp6_S_contig100.746.1 ID=prot_Ecto-sp6_S_contig100.746.1|Name=mRNA_Ecto-sp6_S_contig100.746.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=242bp MSDQATDKHAVADDGEVGIEEEVRDFAARFARLVVSSAFREGGGAAAADGback to top mRNA from alignment at Ecto-sp6_S_contig100:465182..466798+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.746.1 ID=mRNA_Ecto-sp6_S_contig100.746.1|Name=mRNA_Ecto-sp6_S_contig100.746.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1617bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:465182..466798+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:465182..466798+ >mRNA_Ecto-sp6_S_contig100.746.1 ID=mRNA_Ecto-sp6_S_contig100.746.1|Name=mRNA_Ecto-sp6_S_contig100.746.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:465182..466798+ (Ectocarpus species6 EcLAC_371)back to top |