mRNA_Ecto-sp6_S_contig100.733.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.733.1

>prot_Ecto-sp6_S_contig100.733.1 ID=prot_Ecto-sp6_S_contig100.733.1|Name=mRNA_Ecto-sp6_S_contig100.733.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=903bp
MSGLRGTRRRGDPPPRSAPVFLTAIEAQAVVNSETTALRALLLPDYDGVA
VAFAGLLVKVIQRCKREDQVDGRVLHACEALGLYEGRPVSVEMLARRLRR
FGLAWHGFTTEECQAFICDELDTDEDGQVRVQDIFAFLRSFWVQQARRAL
ARPHQSLTLGGDRSCRGGYIRRGTRRQAAVEAGMFATRKFPRGLQQKLRA
AAGRARLCGVDVLKALQGAASPSPRCCRCAGDVKGSSSLGVEATARFLRS
IGVGFDSHHASVSANRGFGERLSHPRGEADARGEADARGEADLGESRDVR
AYVRPGEPFPSEEERVVHVPSSSTQRDRWSGDDLQNRCQAGEATRAEPWW
AQGDVFLASHDQCEGRVAEAQSRQTRGRDGVRTTRLRPSETTARIERGWS
TPSESPKLPSRLNRVMHGGGASGCCDEGARSGRECAVGAADGVGDEEARE
DIGTCNSQRLRRAAKDLKRMQSEYLVLQRQVRGETTDKPSTPPPPPPPPP
PPPTTAEVANLDDSIEHHCRDDTAAAAAATGRRSSHNTLLRPTSFFPGHP
NPKNNGAHHYYFSTAVQQQHQHQHQHQHQHQHQHQHQQKQKKPWLGYEGG
DGVAQREWGAEDGSDDSGGGDDGNGRRCRDRRKEEGSFFRPPPLVMRPKS
SSSSSNAFDNSGITAVRYQYHTAHADCSEAARQNGWVTNWPRLAPDTRRC
RALLLMAAQGKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPTAR
GRRCDAWAGNRGGDRGRASHRGAMHVVSAAVATAENGSSSEPRCMRGVHA
FLNPGEAATRRAAGSKFLPEEDEKTRDWRDRTPERRPARPPAIKSPMYAR
RSRSEERNVWDKRTGRWARSTSKGRSAARIRGRSVDNPCNVRTMSGRDLR
CF*
back to top

mRNA from alignment at Ecto-sp6_S_contig100:353646..360465+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.733.1 ID=mRNA_Ecto-sp6_S_contig100.733.1|Name=mRNA_Ecto-sp6_S_contig100.733.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6820bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:353646..360465+ (Ectocarpus species6 EcLAC_371)
ATGTCGGGCTTGCGAGGGACTCGGAGGCGAGGCGACCCGCCCCCAAGATC TGCGCCTGTGTTCCTCACGGCAATCGAGGCACAGGCGGTTGTCAACTCAG AAACCACAGCCTTGCGGGCACTCCTCTTACCAGACTACGATGGCGTCGCT GTCGCGTTTGCTGGGCTCCTTGTGAAAGTCATACAGAGATGCAAAAGGGA AGATCAGGTCAGTGTTGTCGTTGGTGTTGTTGTCTGCGGTAAAACATAGA GTTGTTTGAATCACAGCATGAATGACAACATTGTTATCATTATTGTCTTT GTCACCAACCATGGTGAACTTCTACAACATTCATCGGCAGTGTGACGCAA CGGGACTAGCCTAGACTAATGTATGTATGTATAGACAGCAAACAACGGTC AACAACGAGAACAACGACAAACAACACACAGCTCTATACGCCACCTCAAT CAACGTTCTGGTGGTGTTGTTGCTACCGTGGAAATCATTGTAATAACCGC CTCTGCTACCCCTTCAGCATTGTCGAAAATCCTACAAGCAAATCAGCAAG TCGTGCGTAAGCGTCGACACTCGCCGGTCTTCTTTTCTGGAGGCCACGTC GTTCGCGTACTACGTTATCCGTCGGCTCGAGTATGATGCCTTGTCCTCCC TCCTCGTGATGAAATGTTTCCTCCCACGACAAAGAAATCATGATGTTCGA CTGATGCAAAGATGTGGTCGCCTGTGATAGACCCTGTGGACTACAGCACG TGATTCGGGCTATCTGGGCTGCGTGCTCGAAGGACTACGAACTGACTACT CCACCCTCGCGCTACGCACATTGTCATTGCCAAGGTCGACGGCCGGGTAC TACACGCGTGTGAGGCGTTGGGGTTGTACGAGGGGAGGCCCGTGTCGGTA GAGATGCTAGCAAGGCGACTGAGACGGTTCGGGCTGGCTTGGCACGGTTT TACAACTGAGGAGTGCCAGGTACTGTATGCCGCAGAGGCCGTTGGGGAAG CTTGCTGTCGTCGCTGTTTACCTGGCCATACACGTGTACATAAATTGTTT CGACCACATGTGGTCTCTCACGGACGTGTCGATTCAATTGTTGAAGGAAA GGATTACCCTAGGCAAGAGCCAAGGGGAGTCTATCATCTTGCAGTGGGTC TTTACGCATGTTTTCTTGTAGCAAGAGGACCCAGTGGCGCTCACTTTTTA GTGATTTCCAATGAACAAGGTGAGCACAAAAATTGACAAGCACCAAAGTG TTGCCGGCATGAGTATCGTCGTATTTTCTGTAAACAACCCGTTGGGCGGC CAATGAAAAACTCCATGGAAGAACACTCCGCGGTGTAGTCAAACGCAAGG GGGCGAAAACGTAAATGAGGTACCCACAACTCAAACACCACCGTTCGTTG TAGTTTTATGGTTCGCTGCCCAACGAGGTAATGTCAACATTGAGAGGGAC ATTTCAAAGGATAGGTACGGCAAGTTGATCGGGTCCACGTGCACGAAAAT AGCAACGCAGGACGTGACAGCTTCAGGTGCCGTGTCCGACAGGCGTTCAT ATGCGACGAGCTCGACACGGACGAAGATGGGCAAGTGAGAGTGCAGGACA TTTTCGCGTTCCTTCGCAGCTTCTGGGTCCAACAAGCCCGTCGGGCACTC GCCCGACCGCACCAGTCTCTCACTTTGGGGGGCGACAGAAGTTGTCGAGG GGGCTACATACGACGCGGGACACGACGGCAGGCGGCCGTAGAAGCTGGGA TGTTTGCCACTAGGAAATTTCCGAGGGGCTTACAGCAAAAGCTGCGGGCA GCCGCGGGGTGAGTGAAACAGAGAGACTTTTCAAAGATCACCCGTGGGTG CGTCAGCGCTGAGTATCTCGTGTCGAGGAGCGTCCCAAGGGAGCCTCTGT TGGCTACTACTCGACCCGACACGGGTGCTTGGCTGTAGGCAAGAGCCAGA ACATGAATCTGATCCGGTCGTCGGGTGTGCTCAACTGCAAAAATCATTTT AACGTCTACGCGGTATCATTCCCTTGTGGGTTGCGATGTCTGTTCTTCGC ACGTTCACCACGAGAGATACGTCTCTTTGCTCGCTGCTTGCCCCCACCGT CGACGTTTGCGGGGTTGCGACTAACCGCCTCACACCTCTGTCGGCACGCG CTCCAAACCCCAGACGCGCTCGCTTGTGCGGTGTGGACGTCTTGAAGGCG TTGCAGGGCGCCGCTTCCCCTTCGCCTCGCTGCTGTAGATGCGCTGGAGA CGTGAAGGGTTCCTCCTCGCTCGGGGTCGAGGCGACAGCAAGGTTCTTGC GGAGCATCGGCGTGGGCTTCGACTCTCATCACGCGTCTGTGTCAGCGAAC CGAGGGTTCGGCGAGCGCCTCTCCCACCCGCGCGGTGAGGCCGACGCGCG CGGTGAGGCCGACGCGCGCGGTGAGGCAGACCTTGGTGAATCCCGGGATG TACGTGCTTACGTGCGGCCGGGAGAGCCGTTTCCTTCAGAGGAGGAGCGT GTAGTGCATGTCCCGTCGTCGTCTACACAGCGAGACCGTTGGAGTGGTGA TGATCTACAGAACCGGTGCCAGGCGGGGGAAGCAACGCGGGCGGAGCCTT GGTGGGCGCAGGGCGATGTTTTCCTGGCTTCGCACGATCAATGCGAAGGT CGAGTCGCCGAGGCACAGAGTAGACAGACACGCGGTCGGGACGGCGTACG CACGACGCGATTGCGTCCGTCAGAGACGACGGCGAGGATAGAGAGGGGTT GGTCTACCCCGTCAGAATCTCCGAAGCTTCCGTCGAGGTTGAACAGGGTC ATGCACGGAGGCGGGGCTTCGGGCTGCTGCGACGAGGGTGCCCGAAGCGG TAGAGAATGCGCGGTCGGAGCGGCCGATGGTGTTGGTGACGAAGAGTGAG TGGAATGGATTGGTGGGTCGGTGAGAATTCTAGGCTCGCCTTGGTCACAC GCTCTTTGTACGGTTTTGTAGAGGCGAAGTGCAGAGAGGAGGAATATTGG AACGTACACGAAGCTGCAAGGTGTAACGACAAGAATGTTAGAAAAAAGGG CGGCGACAACCACCAGACGTATGTCTTCGAATACGCCCGTGGTGACAGGG CGAGAGAGATCCGTTAGAACTTTAAGCATTTGGTTCATGCCCTTGTCTGC ACCGCTTATTATTTGGGTCTTCTCACAAGCTCGTCGCCAACTACCCAGAG ACCTCCCCTTCGTCAACGCAGAAGGTACGACTTATTCCAATGAAAATCCA TGCGTTGCTCCCTGTTTGGATCCCGTAGGCTCCCTGCTTGGATCCCGTAG GCCGGTAGGCAATTGCTAAGTATTTGCGAACGACATCCTCGCTTTCACCA GGGCACGAGAAGACATCGGAACCTGCAACTCGCAGCGTTTGCGGCGTGCG GCCAAAGACCTGAAACGGATGCAGAGCGAGTACCTTGTTCTTCAGCGTCA AGTCCGTGGCGAAACAACAGACAAGCCAAGCACACCGCCACCGCCGCCAC CACCACCACCACCACCACCAACCACTGCCGAAGTAGCAAACCTCGACGAC TCCATCGAGCACCACTGTCGTGACGACACAGCAGCAGCAGCCGCAGCAAC AGGTAGGCGCTCCTCGCACAACACACTTCTCCGCCCCACTTCCTTCTTCC CTGGTCACCCCAACCCCAAGAACAACGGAGCGCATCACTACTACTTCAGC ACGGCGGTACAGCAGCAGCACCAGCACCAGCACCAGCACCAGCATCAGCA CCAGCACCAGCACCAGCACCAGCAGAAACAAAAGAAACCTTGGTTGGGGT ATGAGGGGGGCGACGGAGTTGCCCAAAGAGAGTGGGGAGCAGAAGACGGT AGCGACGATAGTGGTGGCGGCGACGATGGCAACGGCCGTCGGTGTAGAGA CCGCCGAAAAGAAGAGGGGTCATTTTTTCGACCGCCGCCTCTGGTGATGC GGCCTAAATCCTCGTCTTCTTCGTCGAATGCCTTCGACAACTCGGGGATT ACCGCAGTCAGGTGCGTGCGAGAATGGTTTATTTGATCGACAAGTTTTGG TGCCTGGTCGGAATTAGGTAGTCTTTCTCGACTCGGTCACTACTGCATCG GTCGGCGCTTGCGTGTCGACCTGCACGGGTCGTGTCTTGTGGTAACTTTT TTCGTGTATTCCCCACGGGCACACACAATCGGAGGTTCGTCACTCATTAG CGCATCGTCCATGCAAGTGGCTCTCGTGGCTCGAGCGAAAGTAGACATGT TGTTCTCAGCTCGGCGATCACATTTCGATGGTTGGGGGTCGGTCGAACGT CGCCAGAGAACAGAAGAACGGCGCCTGATCCCCACGGTATCTTCGATGCG CTCGCAGTCATGATTCAAGGATGGCACTGATTCACGGTTCCATTGTCTTC TTCTGCCATATGCGTGCAGATATCAATACCACACCGCTCACGCGGACTGC TCAGAGGCCGCGAGGCAGAACGGTTGGGTCACTAACTGGCCTCGGCTCGC TCCCGATACCCGGAGATGGTGAGCCTCAAGGAACTGTCAAGGAGGACCCG ATTTGCAGGGTATCCGTCGATTGACTTTTACCGGATATACAAAGCTCGGC GTAGGTGGGATATGTACTTCCTCCAAGAGCCCGGTATGCGCCGTGTCTTT GCGCCCTGTGTTAGACTGAAAATCATTTGTCTATGGAATGCTTCACATGA CAGTCATGTTGCTCCGAGGCCAAGCACAACTTGCCGCTCCAACCAGCGTG TTCGTGCCTCTTGAAAACACAGTCGGGCACTACTGTTGATGGCGGCGCAG GGCAAGGCCTGTACAGAGGATACCTTCGATGTCGCTACGGCCCGTAACGG CTTCTCGGGGATCCGAAGCCTACAGGCTCTAGGACTCAGCGAGGAAAAGG TGGGAGAAGGCCAGGGGTGTTTGATACCAAGACCCGCTGAAAAACGGGCT GACCTCAGGAAACGCGGCAAATGGCGCCGTACTACCTTATGCCTTGCCCC GTGGATCTCCTTGAGACGTTTACGTACTATGTTTGAAAATGGCGGGCGGT TTGATGGTCCCGGACGTGCCGTCTACTTGCGCTTTGCCCAAGCAATACTT GCTCACACGGCAACCCAGGAAAGTACGTGGAAGTTATCTCCGAAGCCAAG ATGACGTGTAGTACAAAGGGCTCTTCAATGAAGAGAGCGCCCCGAGTCGT GCAGGGGTACCGCATAGATTTTCTGCAGGCGGAAAGTTCGCCCGTTCGTG TTCGCTCGCGCCGTACCAATGAGTGGCCAACACGCAGGTGCAGCGCTGAG GCTACTGCTGTAAATCGCCCAAAACAATAAAAATCTCTTTTCCAACCCAA CCCGCTCCTCTGCCCCTCCTCGCTGGAAACTCAGCAGGGGTGTAGCACAC CAACCGCCAGAGGTAGACGTTGCGATGCCTGGGCCGGAAACAGGGGTGGC GATAGGGGACGGGCGAGCCACCGGGGCGCTATGCACGTAGTAAGCGCTGC GGTGGCGACAGCCGAGAACGGCAGCAGCAGCGAGCCTCGCTGTATGCGGG GTGTGCATGCCTTCTTGAACCCGGGGGAGGCGGCGACAAGGTGGGCCGCG TTAGTCTTTTCAAGGTGTCCGGAACGATGAACCGGATACCCCTAAAAGCC TTGCCTATTTAGCAACCAGGGGTGGGGTAATGTGGAGATCCCCTGCATGA AGGATACAGTCTTCTCAACGCCTGTCAAGGACGATTCCCTCGTTTTTCAC GCCTCTATGTTAGCTCAAGATGAATTGACATCAACGGTTCTACATAGACT GTGTCCAATCTGAAAGTAAACGTCTCAGTGGTGGAGGCGGAGTACCGCGT TCCTTCCGGGTGGATGATCTATCTCTTCTGTCAAGTTTTTTTGAGTAAAT AGATGAAAAGCAAAGCGGTTGCCGAACTACTCCGAGACCCAGAGACTGTT GAAACCTTGTAGCGCCCGCGGTCGGCGGGGGGGATAGATCGACAAGCTCC CCCCCCGACACGGGCGTGTTTTCGTCGGCCAGGGCGGGTAACTCTACCTA AACCTACTTTTCACGGTGTTTGCTGCGGGCAGGCGGGCAGCAGGGTCGAA ATTCTTGCCGGAAGAGGACGAAAAGACCAGGGATTGGAGAGACCGTACGC CGGAGAGGAGGCCTGCTCGGCCGCCGGCGATCAAGAGCCCCATGTACGCC AGAAGGAGTCGTTCCGGTACGAAACGCCTCCGTACGCCGTGCTCGGGCCT TATCTTGCACCAGGCATTAGATACGCCCGATCGGTTTCATGTGGTATACC ATGTCGTCACACACTCCTCCCCGTTGGAACGTTTGTGTCTCGTCGAACGT TTGCAACATACGTCGCCGATGGTTTTGGTGCAGCACCCTGTTGGTTGCGA ACCAGCTGAGTTGAACCGCCCAGACATAGCCTGCTGCTGCGGGTGGGTGA GGCGTGGATAACAGTGTCATGATTTTCGTACATCCACGGGGGGCGCGAGA GAAAAAGCTATGGTGTTGTAGGTTGCACTAAGGTCTGACAATGTCGTTCA CTCTCTTAGGGATGCAAGTGCATCATCTTTTGCCCTCGACCTCTGTCTAC ATCCTCATCCCCGAAGTTTGTGCAATCCCGCTCGTGTTTATCGTCTCTCG TCACCATACTGCCGCCGCTGTCAGAGGAGAGAAACGTGTGGGACAAAAGG ACCGGACGATGGGCCAGATCCACATCCAAGGGGCGGTCGGCTGCTCGCAT TCGTGGGCGGTCTGTCGACAACCCCTGCAACGTCCGGACAATGTCTGGCC GCGACTTGCGCTGCTTTTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:353646..360465+

>mRNA_Ecto-sp6_S_contig100.733.1 ID=mRNA_Ecto-sp6_S_contig100.733.1|Name=mRNA_Ecto-sp6_S_contig100.733.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2709bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:353646..360465+ (Ectocarpus species6 EcLAC_371)
ATGTCGGGCTTGCGAGGGACTCGGAGGCGAGGCGACCCGCCCCCAAGATC
TGCGCCTGTGTTCCTCACGGCAATCGAGGCACAGGCGGTTGTCAACTCAG
AAACCACAGCCTTGCGGGCACTCCTCTTACCAGACTACGATGGCGTCGCT
GTCGCGTTTGCTGGGCTCCTTGTGAAAGTCATACAGAGATGCAAAAGGGA
AGATCAGGTCGACGGCCGGGTACTACACGCGTGTGAGGCGTTGGGGTTGT
ACGAGGGGAGGCCCGTGTCGGTAGAGATGCTAGCAAGGCGACTGAGACGG
TTCGGGCTGGCTTGGCACGGTTTTACAACTGAGGAGTGCCAGGCGTTCAT
ATGCGACGAGCTCGACACGGACGAAGATGGGCAAGTGAGAGTGCAGGACA
TTTTCGCGTTCCTTCGCAGCTTCTGGGTCCAACAAGCCCGTCGGGCACTC
GCCCGACCGCACCAGTCTCTCACTTTGGGGGGCGACAGAAGTTGTCGAGG
GGGCTACATACGACGCGGGACACGACGGCAGGCGGCCGTAGAAGCTGGGA
TGTTTGCCACTAGGAAATTTCCGAGGGGCTTACAGCAAAAGCTGCGGGCA
GCCGCGGGACGCGCTCGCTTGTGCGGTGTGGACGTCTTGAAGGCGTTGCA
GGGCGCCGCTTCCCCTTCGCCTCGCTGCTGTAGATGCGCTGGAGACGTGA
AGGGTTCCTCCTCGCTCGGGGTCGAGGCGACAGCAAGGTTCTTGCGGAGC
ATCGGCGTGGGCTTCGACTCTCATCACGCGTCTGTGTCAGCGAACCGAGG
GTTCGGCGAGCGCCTCTCCCACCCGCGCGGTGAGGCCGACGCGCGCGGTG
AGGCCGACGCGCGCGGTGAGGCAGACCTTGGTGAATCCCGGGATGTACGT
GCTTACGTGCGGCCGGGAGAGCCGTTTCCTTCAGAGGAGGAGCGTGTAGT
GCATGTCCCGTCGTCGTCTACACAGCGAGACCGTTGGAGTGGTGATGATC
TACAGAACCGGTGCCAGGCGGGGGAAGCAACGCGGGCGGAGCCTTGGTGG
GCGCAGGGCGATGTTTTCCTGGCTTCGCACGATCAATGCGAAGGTCGAGT
CGCCGAGGCACAGAGTAGACAGACACGCGGTCGGGACGGCGTACGCACGA
CGCGATTGCGTCCGTCAGAGACGACGGCGAGGATAGAGAGGGGTTGGTCT
ACCCCGTCAGAATCTCCGAAGCTTCCGTCGAGGTTGAACAGGGTCATGCA
CGGAGGCGGGGCTTCGGGCTGCTGCGACGAGGGTGCCCGAAGCGGTAGAG
AATGCGCGGTCGGAGCGGCCGATGGTGTTGGTGACGAAGAGGCACGAGAA
GACATCGGAACCTGCAACTCGCAGCGTTTGCGGCGTGCGGCCAAAGACCT
GAAACGGATGCAGAGCGAGTACCTTGTTCTTCAGCGTCAAGTCCGTGGCG
AAACAACAGACAAGCCAAGCACACCGCCACCGCCGCCACCACCACCACCA
CCACCACCAACCACTGCCGAAGTAGCAAACCTCGACGACTCCATCGAGCA
CCACTGTCGTGACGACACAGCAGCAGCAGCCGCAGCAACAGGTAGGCGCT
CCTCGCACAACACACTTCTCCGCCCCACTTCCTTCTTCCCTGGTCACCCC
AACCCCAAGAACAACGGAGCGCATCACTACTACTTCAGCACGGCGGTACA
GCAGCAGCACCAGCACCAGCACCAGCACCAGCATCAGCACCAGCACCAGC
ACCAGCACCAGCAGAAACAAAAGAAACCTTGGTTGGGGTATGAGGGGGGC
GACGGAGTTGCCCAAAGAGAGTGGGGAGCAGAAGACGGTAGCGACGATAG
TGGTGGCGGCGACGATGGCAACGGCCGTCGGTGTAGAGACCGCCGAAAAG
AAGAGGGGTCATTTTTTCGACCGCCGCCTCTGGTGATGCGGCCTAAATCC
TCGTCTTCTTCGTCGAATGCCTTCGACAACTCGGGGATTACCGCAGTCAG
ATATCAATACCACACCGCTCACGCGGACTGCTCAGAGGCCGCGAGGCAGA
ACGGTTGGGTCACTAACTGGCCTCGGCTCGCTCCCGATACCCGGAGATGT
CGGGCACTACTGTTGATGGCGGCGCAGGGCAAGGCCTGTACAGAGGATAC
CTTCGATGTCGCTACGGCCCGTAACGGCTTCTCGGGGATCCGAAGCCTAC
AGGCTCTAGGACTCAGCGAGGAAAAGGGGTGTAGCACACCAACCGCCAGA
GGTAGACGTTGCGATGCCTGGGCCGGAAACAGGGGTGGCGATAGGGGACG
GGCGAGCCACCGGGGCGCTATGCACGTAGTAAGCGCTGCGGTGGCGACAG
CCGAGAACGGCAGCAGCAGCGAGCCTCGCTGTATGCGGGGTGTGCATGCC
TTCTTGAACCCGGGGGAGGCGGCGACAAGGCGGGCAGCAGGGTCGAAATT
CTTGCCGGAAGAGGACGAAAAGACCAGGGATTGGAGAGACCGTACGCCGG
AGAGGAGGCCTGCTCGGCCGCCGGCGATCAAGAGCCCCATGTACGCCAGA
AGGAGTCGTTCCGAGGAGAGAAACGTGTGGGACAAAAGGACCGGACGATG
GGCCAGATCCACATCCAAGGGGCGGTCGGCTGCTCGCATTCGTGGGCGGT
CTGTCGACAACCCCTGCAACGTCCGGACAATGTCTGGCCGCGACTTGCGC
TGCTTTTGA
back to top