Homology
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
D7FKE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE9_ECTSI)
HSP 1 Score: 1297 bits (3357), Expect = 0.000e+0
Identity = 816/855 (95.44%), Postives = 820/855 (95.91%), Query Frame = 1
Query: 34 MPKEATCDVECAMKVEEIRIMSKKRKQSQRVGG-NGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGFGGGSSSLAEADGRGEAARSKSTTGFAQAASGDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSGGSGGGRMPRAFPSSAAGTTTAT-AASAVGFCPPSDLQYAGSIVGAEGNNRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADHIRGDGTGEHLGDGQQQQQFDPAAMREAFSVQAGAGRVVAPSHSQGLSGRQGAGLAAPRGYMAGDYTLTPKAPEDGGAGRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXXVATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME 2577
MPKEATCDVECAMKVEEIRIMSKKRKQSQRVGG NGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSG GGGS+SLAE DGRGEAARSKSTTGFAQAASGDEGA+GSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSG AASAVGFCPPSDLQYAGSIVGAEGN RVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADH+RGDGTGE LGDGQQQQQFDPAAMREAFSVQA AGRVVAPSHSQGLSGRQGAGLA PRGYMAGDYTLTPKAPEDGG+GRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXXVATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME
Sbjct: 1 MPKEATCDVECAMKVEEIRIMSKKRKQSQRVGGGNGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGIGGGSNSLAETDGRGEAARSKSTTGFAQAASGDEGAKGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSGXXXXXXXXXXXXXXXXXXXXXXXAASAVGFCPPSDLQYAGSIVGAEGNIRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADHMRGDGTGERLGDGQQQQQFDPAAMREAFSVQAVAGRVVAPSHSQGLSGRQGAGLAPPRGYMAGDYTLTPKAPEDGGSGRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXXVATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME 855
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
A0A6H5KUD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD1_9PHAE)
HSP 1 Score: 1012 bits (2617), Expect = 0.000e+0
Identity = 673/875 (76.91%), Postives = 692/875 (79.09%), Query Frame = 1
Query: 1 MKMARGESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVGGNGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGFGGGSSSLAEADGRGEAARSKSTTGFAQAASGDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSGGSGGGRMP----RAFPSSAAGTTTATAASAVGFCPPSDLQYAGSIVGAEGNNRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADHIRGDGTGEHLGDGQQQQQFDPAAMREAFSVQAGAGRVVAPSHSQGLSGRQGAGLAAPRGYMAGDYTLTPKAPEDGGAGRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXX------------VATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME 2577
MK A+GESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVG XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+RRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQK R XXXXXXXXX D+KDFSPGRGRDAETP CGSSCDCVDTS LSGGSG G GEAARSKSTTGFAQ A+ DEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAA GEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQG EH+P+HPAEFSG RAFP T ASAVG CPPSDLQYAGS VGAE NNR PKEVHLVGGGCGSGVSTAG SS LSDSSSLVWS GGED+ AGSPKEAEQGG+ AA AERPRRRERP LN+ GASQLE AAAADVSMD+ARA ASKAR SVADHIRGDGTGEHLGD QQQQQFDPAAMREAFSVQAGAGR V PSHSQGLSGRQGAGLAAP+ Y+ GDYTLTPKAP++GGAGR+AP RGQPAVLGAELL GEGALGAHK+IFAARSPAEAR ALA+A LAPVTST NASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNF +RGWCGG XXXXXXXX VATPAFGEAGGGALRGGSG GKEG NG GAGADLGN+KEQQRLDSLSLQPSDAGDPSAMMGLL QDDMFDFGMLDREGELKSA GDSTPPG VARPNGDEHSTLFSFLME
Sbjct: 1 MKKAKGESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVGXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXPSPADQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKPRX------------------------------------AAXXXXXXXXXXDLKDFSPGRGRDAETPGCGSSCDCVDTSNLSGGSGVXXXXXXXXXXXGSGEAARSKSTTGFAQTANRDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAA-GEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGTEHLPKHPAEFSGXXXXXXXXXXXXRAFPXXXXXXXXXTTASAVGVCPPSDLQYAGSNVGAEANNRAPKEVHLVGGGCGSGVSTAGCSSTLSDSSSLVWSRGGEDRPAGSPKEAEQGGKDAAPAERPRRRERPCALNYEGASQLEAAAAADVSMDAARATASKARQSVADHIRGDGTGEHLGDAQQQQQFDPAAMREAFSVQAGAGR-VGPSHSQGLSGRQGAGLAAPQRYVPGDYTLTPKAPKNGGAGRVAPQPRGQPAVLGAELLGGEGALGAHKAIFAARSPAEARAALAAAALAPVTSTDNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFDRRGWCGGGGXXXXXXXXXXGGXXXXXXXXVATPAFGEAGGGALRGGSGVGKEGSGNGHGAGADLGNNKEQQRLDSLSLQPSDAGDPSAMMGLLHQDDMFDFGMLDREGELKSAPGDSTPPGSAVARPNGDEHSTLFSFLME 826
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
A0A835YR85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR85_9STRA)
HSP 1 Score: 94.7 bits (234), Expect = 6.380e-20
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 412 RFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 609
RFVW LH FV A+FDVGLK ASP++LL+MMP GLT+EH+KSHLQK+RLHR +SREEFL +
Sbjct: 1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKH 66
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
A0A6S6I5N2_9STRA (Phosphorus starvation response 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I5N2_9STRA)
HSP 1 Score: 104 bits (259), Expect = 1.360e-19
Identity = 48/74 (64.86%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 388 SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 609
+ ++ +R+RFVW LH+DFVAA+FDVGLKCASPK +LEMM LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct: 70 NNNSKARKRFVWPDDLHRDFVAAIFDVGLKCASPKTILEMMNNTKDLTPDHIKSHLQKYRLHRERAREEFLQHF 143
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA)
HSP 1 Score: 103 bits (256), Expect = 2.070e-19
Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 388 SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 609
S+ + +++RFVW LH+DFVAA+FDVGLKCASPK ++EMM LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct: 49 SESSKAKKRFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSNTKELTPDHIKSHLQKYRLHRERAREEFLQHF 122
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
A0A7S3QDX4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDX4_9STRA)
HSP 1 Score: 95.5 bits (236), Expect = 1.030e-16
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 409 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
RRF W LH+DFV+AVFDVGLK +SP LLE MP + +TSE IKSHLQKYRLHRQ+S++EF+ SY+
Sbjct: 158 RRFAWPDELHRDFVSAVFDVGLKHSSPSALLEQMPKHEDITSERIKSHLQKYRLHRQKSKKEFMSSYD 225
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA)
HSP 1 Score: 89.0 bits (219), Expect = 3.120e-16
Identity = 40/68 (58.82%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 409 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
+RF W LH+DFVAA+FDVGLK +SP +LE MP + +TSE +KSHLQKYR+HR +S++EF+ SY+
Sbjct: 84 KRFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQITSERVKSHLQKYRIHRIKSKKEFMSSYD 151
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
A0A4D9DAJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAJ4_9STRA)
HSP 1 Score: 89.4 bits (220), Expect = 6.120e-15
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 430 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct: 287 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 348
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
K3X7I1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7I1_GLOUD)
HSP 1 Score: 88.2 bits (217), Expect = 6.690e-15
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 391 KHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVV---DGLTSEHIKSHLQKYRLHRQRSREEFLKSYNY 615
K+ +RF+W LH+ FVAA+FDVGLK ASPK LL +M V GLT+EH+KSHLQKYRL+ +RSR EFL+ Y++
Sbjct: 87 KYERKTKRFIWPDELHRLFVAAIFDVGLKNASPKALLGLMGVAGPDSGLTTEHLKSHLQKYRLNYERSRAEFLEFYDH 164
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match:
W7TSM2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSM2_9STRA)
HSP 1 Score: 89.4 bits (220), Expect = 1.250e-14
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 430 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct: 316 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 377
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 0.00e+0 / Id = 95.44 Expect = 0.00e+0 / Id = 76.91 Expect = 6.38e-20 / Id = 66.67 Expect = 1.36e-19 / Id = 64.86 Expect = 2.07e-19 / Id = 63.51 Expect = 1.03e-16 / Id = 66.18 Expect = 3.12e-16 / Id = 58.82 Expect = 6.12e-15 / Id = 66.13 Expect = 6.69e-15 / Id = 57.69 Expect = 1.25e-14 / Id = 66.13 Sequence D7FKE9_ECTSI A0A6H5KUD1_9PHAE A0A835YR85_9STRA A0A6S6I5N2_9STRA W7U4E9_9STRA A0A7S3QDX4_9STRA A0A7S3LD31_9STRA A0A4D9DAJ4_9STRA K3X7I1_GLOUD W7TSM2_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 90.1 Seed ortholog evalue 5.4e-15 Seed eggNOG ortholog 65071.PYU1_T013180 Preferred name PCL1 Model size 2580 Hectar predicted targeting category other localisation GOs GO:0000156,GO:0000160,GO:0001101,GO:0001763,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0007568,GO:0007623,GO:0008150,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009628,GO:0009653,GO:0009719,GO:0009723,GO:0009725,GO:0009735,GO:0009736,GO:0009755,GO:0009873,GO:0009888,GO:0009889,GO:0009909,GO:0009933,GO:0009966,GO:0009987,GO:0010014,GO:0010015,GO:0010016,GO:0010033,GO:0010035,GO:0010073,GO:0010074,GO:0010075,GO:0010082,GO:0010119,GO:0010150,GO:0010223,GO:0010346,GO:0010380,GO:0010468,GO:0010492,GO:0010556,GO:0010646,GO:0019219,GO:0019222,GO:0019827,GO:0022622,GO:0023051,GO:0023052,GO:0031323,GO:0031326,GO:0031537,GO:0032501,GO:0032502,GO:0032870,GO:0035556,GO:0040008,GO:0042221,GO:0042752,GO:0042753,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048364,GO:0048366,GO:0048367,GO:0048507,GO:0048509,GO:0048511,GO:0048518,GO:0048532,GO:0048580,GO:0048583,GO:0048638,GO:0048646,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051193,GO:0051239,GO:0051252,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071368,GO:0071369,GO:0071495,GO:0080022,GO:0080036,GO:0080050,GO:0080090,GO:0080113,GO:0090056,GO:0090506,GO:0090693,GO:0098727,GO:0099402,GO:0140110,GO:1901401,GO:1901463,GO:1901700,GO:1903506,GO:1905392,GO:1905393,GO:2000026,GO:2000112,GO:2000241,GO:2000280,GO:2001141 Exons 3 EggNOG free text desc. DNA-binding transcription factor activity EggNOG OGs 1MGPT@121069,2C4RN@1,2RIEW@2759 Ec32 ortholog description G2-like domain Myb transcription factor Ec32 ortholog Ec-12_002320.1 Cds size 2580 COG Functional cat. K Best tax level Pythiales Best eggNOG OG NA|NA|NA
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348723.8776975-CDS-Ecto-sp6_S_contig100:318807..321345 1682348723.8776975-CDS-Ecto-sp6_S_contig100:318807..321345 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 318808..321345 - 1682348723.8915892-CDS-Ecto-sp6_S_contig100:321960..321981 1682348723.8915892-CDS-Ecto-sp6_S_contig100:321960..321981 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 321961..321981 - 1682348723.9005613-CDS-Ecto-sp6_S_contig100:322446..322467 1682348723.9005613-CDS-Ecto-sp6_S_contig100:322446..322467 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 322447..322467 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.727.1
>prot_Ecto-sp6_S_contig100.727.1 ID=prot_Ecto-sp6_S_contig100.727.1|Name=mRNA_Ecto-sp6_S_contig100.727.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=860bp
MKMARGESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVGGNGALAS back to top mRNA from alignment at Ecto-sp6_S_contig100:318808..322467-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.727.1 ID=mRNA_Ecto-sp6_S_contig100.727.1|Name=mRNA_Ecto-sp6_S_contig100.727.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3660bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:318808..322467- (Ectocarpus species6 EcLAC_371)ATGAAGATGGCCAGAGGCGAG GTGAGGCTGGCGATGGGTGCACGGTTGAT
GTTGGCTCAATTTTGAGCCTTTCGGCCCCGGTGAACCTGGTGAGCAGGTC
ACACCCTTCTAGCAGAGTAAAGGTGTTCAACAACACATCAGCAGACACCG
CTCAGAATGCTCTGCTGTGAAGTTGCACGAAATGCGATGTTCTAGCCTCT
GGGACTACGCGCTTCTTCCATGCGTGCTCGCGCGTCACAGGTAGCCTTCG
CCATTCTCGACAGGTATGAGAGAGGCAGCAGTATCAAGAGGCCATCGAAG
TCGATAGTTGAGGTCTAGTGCGAACCAAAATGTTTTTTCGTCGTCGGTTT
TTAGTTGTGTGCTGGCGTGACGATTCAGCCGCCCATCTCCACTGCAGCAA
GTCTCACTCCTGTGCCGCTGCTCCTCCCTCCCTGCTACGCTCCTCTTGGC
CTTGCGCGTCATCTGGCCCCATCTCATGTACTCAAGTCCTCCCTCCGAAT
GCCGAAG GTGAGTCTTCCTTGCTTGCATCTGTCACGCACATGTGTGATCC
AATTTATTCCTTTCCTTTCGCTCCCCGTTAATACTGCTGTACCATCTGCT
AGCTTAGTACTCCTTGAGCCACTGGCAAGTTCAGTGATTTTTCGAAGACA
TCCCGGCACGTCGATAGAAGTTACACCTCTCAGCGGGACAAGGCGGGGGG
GGTGGCGGGGTACACTGACGTGCGCGTTTTATTCTGAAAGTCGACCACGT
GTGGATGGTTGGTTGTTTTATGCTTCTTCAGTCCCTTGGAGGAGGGCTCC
CGAATGCTCTCTTGCTTACAACTTACAACACATGGCAGTAGGAAAAGGCA
GACCATGTATATATACATGCCCCGTACTCGAAGGGAGATTAATTGATTAT
CAAAGGTTGATCGATAAGCCGCTGCCGTACAGTCTGTCGCAAGCTTTTGT
GGGACGCACGTCGCCCATGCTTTCCTAGAACAATAAAAAGTACTTGTTTA
TACTCCTTTGTATGCGTGCAAAGAGGAGACAACCCGTTCGTTACCCTGCC
GGCATGCCGACCGACCAACGCCCCGCTTGCAAACGCCCCGCTCGCAAACG
CCCCGCTCCCACCCGGCCACAGGAGGCGACCTGCGACGTCGAGTGTGCCA
TGAAGGTAGAGGAGATTCGCATCATGAGCAAGAAGCGCAAGCAGTCTCAG
CGGGTCGGCGGCAACGGGGCCTTGGCCTCCGAAGAGGGCGCAAATATCAG
CGCAAAGGCGGCCAAGCGGCCCTTGTCGAACAGTAACGGCTGCGGGGCGG
GCACGCAGTCCGCCAAGAGCGGCGGCGGCGGCGGCGGCGGTGGCTCCGTG
CCTCCTCCTGCGGACCAAATTTCGGCGGCCTCCGCGGGAGTGGCGGCGCC
GAACCTATCGAAGGCGTCTTCGGCTTCGGCGGCCGGCGGCGGCGGCAGCG
GCGGCGGCGGCAAGGACTCCAAACACGCCGCCTCTCGCCGGCGGTTCGTC
TGGTCCGTGCCCCTGCACCAGGACTTCGTGGCGGCGGTCTTTGACGTTGG
GCTCAAGTGCGCGTCGCCCAAGCTCCTCCTGGAGATGATGCCCGTTGTGG
ACGGGCTCACCTCCGAGCACATCAAGAGCCACCTACAGAAGTACCGCCTG
CACAGGCAGCGCTCCCGGGAGGAGTTCCTAAAGAGCTACAACTACCTCAC
CGACCTGGACGGCGGCAAGAGCCTGGGCGGGGGCTCGGCGGCCGCCACCG
TTGCCAAGGCCGCGGCAGCGGCCGCGGGCGGCGGCGGCGGCGACGACGTT
AAAGACTTTTCGCCCGGGCGCGGGCGGGACGCGGAGACTCCGGAGTGTGG
GTCGAGTTGCGACTGCGTTGACACGTCCAAACTCAGCGGGGGCAGCGGGT
TCGGGGGCGGCAGCAGCAGTCTCGCCGAAGCGGACGGGAGAGGGGAGGCG
GCGCGCTCGAAATCGACGACGGGGTTTGCGCAGGCTGCGAGCGGGGACGA
AGGTGCCGAGGGGAGCGGGGGCGGCGCCAAGGCGAGCGCGCAGCTGGCCG
GAGGCGGGACGGAGGCGGTCGGCGGGGCGCAGCGGCTGCAGCTGCCCGGG
GAGGCGGCGGCGGGGGAGGTAGTCAACGGCGCGCTGCTCCTGTCGCACCT
GGAGCTCCTCGCCAAAGGGATCGACATGCAGGTCAAGTTCCACAACCACC
TGCGGGAGGTGGTCGAGAGCCAGCAGCAGCTGCAGGCCCAGCTCGTGAGA
CAACAGGGCAGGGAGCACGTCCCCCAGCACCCGGCCGAGTTTTCCGGCGG
CAGCGGCGGCGGCAGGATGCCGAGGGCCTTCCCGTCGAGCGCCGCGGGGA
CCACCACCGCGACTGCGGCTTCAGCCGTCGGCTTTTGTCCGCCGTCGGAC
TTGCAGTACGCGGGCAGCATCGTCGGCGCAGAGGGCAACAACCGGGTGCC
GAAAGAAGTGCACCTGGTTGGCGGCGGCTGCGGCAGCGGGGTGTCCACGG
CTGGATACAGCAGCAATCTCTCGGATTCGAGCAGCCTGGTGTGGTCGGGT
GGAGGGGAAGACAAGCTTGCCGGCTCGCCCAAGGAAGCGGAACAGGGGGG
CAGAGGTGCCGCCGCAGCGGAACGACCGAGACGAAGAGAACGGCCGGGCG
TACTGAACCACGCTGGGGCGTCGCAGCTAGAAGGGGCTGCGGCGGCCGAT
GTTTCGATGGACTCCGCTCGCGCCGCCGCTTCCAAGGCCCGCCCGAGCGT
CGCCGACCACATTCGCGGGGACGGGACGGGTGAGCATCTCGGCGATGGTC
AACAGCAACAGCAGTTCGACCCGGCAGCAATGCGAGAGGCGTTTTCTGTG
CAGGCGGGCGCGGGGAGGGTGGTGGCTCCTTCCCATTCTCAGGGCCTGTC
GGGCCGCCAGGGAGCGGGCTTAGCAGCGCCCCGGGGATACATGGCCGGAG
ACTACACGCTCACGCCCAAAGCCCCGGAGGACGGCGGTGCAGGTAGGCTA
GCCCCGCACGCTCGCGGGCAGCCGGCGGTGTTAGGGGCGGAGTTGTTGGC
CGGAGAGGGGGCGTTAGGGGCCCACAAGTCGATCTTTGCGGCGCGTAGCC
CGGCGGAAGCCCGGGTTGCCTTGGCCTCCGCCACCCTTGCTCCGGTGACC
TCGACTGGCAACGCGAGCAACGGGCAGGAGACGCTGACGCTGCAGCGACA
CATGCAGGCGCAGATGTCGATGCAGCAGAGCATGCTCTCGGCGTGCAACG
ACCAGGCGACTAACTTCGGCCAGCGCGGGTGGTGCGGGGGAGGGGGGCCG
CCGGCAGCGGCGGCGGCGGCGGTGGCTACTCCTGCGTTCGGCGAGGCGGG
CGGCGGCGCGCTCCGCGGCGGTAGTGGAGCGGGGAAGGAGGGCGGTGGGA
ACGGTGATGGGGCGGGGGCAGACCTGGGGAACAGCAAGGAGCAGCAGCGC
CTCGATTCGCTGTCCCTGCAACCCTCCGATGCGGGGGACCCCTCGGCGAT
GATGGGCCTCCTCCCCCAAGACGACATGTTTGACTTCGGCATGCTCGACC
GCGAGGGTGAGTTGAAGTCGGCGCTTGGAGACAGTACCCCTCCCGGCCCC
CCAGTGGCTCGGCCTAACGGGGACGAGCACTCGACCCTGTTTTCGTTCTT
GATGGAATAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:318808..322467-
>mRNA_Ecto-sp6_S_contig100.727.1 ID=mRNA_Ecto-sp6_S_contig100.727.1|Name=mRNA_Ecto-sp6_S_contig100.727.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2580bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:318808..322467- (Ectocarpus species6 EcLAC_371) back to top