mRNA_Ecto-sp6_S_contig100.726.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.726.1
Unique NamemRNA_Ecto-sp6_S_contig100.726.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: D7FKF0_ECTSI (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF0_ECTSI)

HSP 1 Score: 941 bits (2432), Expect = 0.000e+0
Identity = 485/535 (90.65%), Postives = 487/535 (91.03%), Query Frame = 1
Query:   25 MRPEAGLESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVAD--------------------------------------VPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQFVKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            MRPEAGLESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREA+VQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGV +                                      VPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIK         DTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQFVKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH
Sbjct:    1 MRPEAGLESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAMVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVGESPPRRRSYDTWDNRFARPKKRVSFSKDDSFRETDPLSNVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIK---------DTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQFVKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 526          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: A0A6H5KVD1_9PHAE (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD1_9PHAE)

HSP 1 Score: 794 bits (2051), Expect = 4.560e-277
Identity = 422/482 (87.55%), Postives = 427/482 (88.59%), Query Frame = 1
Query:    1 MAHS---RRRSMRPEAGLESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQ---------GKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQFVKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLK 1410
            MAH+   RRRSMR EAGLESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREA+VQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGV DVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKA               +  FG    + W  P  G V        LL   +           GKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQF KKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLK
Sbjct:    1 MAHNTGIRRRSMRAEAGLESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAMVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGV-DVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKARHSA-----------ADAFG----AVWGIPPIGVVSSRARGRVLLAVRLGPPGKPHQPETGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQFAKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLK 466          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: A0A836CA96_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA96_9STRA)

HSP 1 Score: 706 bits (1822), Expect = 6.110e-242
Identity = 357/497 (71.83%), Postives = 415/497 (83.50%), Query Frame = 1
Query:   43 LESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGG--KPKVVELSTVPTERRDQFVKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCF----DKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            L+SLLH++PTH+SVEDNM+EA+HMLD+LPPDQRKGF++LF    Q R  PA+  A+++ PP E ++   DIP CP DQALRHELLDK+VILKLNGGLGTSMGC +PKSAIEVR+DLSFLDLTVRQVEYLNSMYGV DVPLVL++SFKTHETTAKIIRKYRMHNLTIHTFMQSC+PR+IK         DTLQPMP+G F +    EWYPPGHGDVY +LY+SGLLENLINQGKEY+FISNVDNLGAT+DL +LYH+ D EA+FA+E ++ TRAD  GGL+VGYG   KPK++ELS +  +  D F K+FNLFNTNNIWANLRA+QRLVAK+E+ L+V V ER VSG +TIQLET    A+ CF     KV+A  V R+RYLPVKSTSDLFLVQSNLY ++HG+LVMS ERP   TPLIKLG+EF+ VED+L RIPHGVP I +LDHLTVAGDV FG N+TLKGTVIIVANEGS+IMIPDGTVL+D VVTGNLRILDH
Sbjct:   35 LDSLLHFRPTHTSVEDNMREALHMLDILPPDQRKGFMQLFSAHCQTRSCPAIVPAKVQHPPPEMLINLEDIPECPGDQALRHELLDKVVILKLNGGLGTSMGCKFPKSAIEVRSDLSFLDLTVRQVEYLNSMYGV-DVPLVLMNSFKTHETTAKIIRKYRMHNLTIHTFMQSCYPRVIK---------DTLQPMPAGSFSQESQEEWYPPGHGDVYQTLYSSGLLENLINQGKEYVFISNVDNLGATIDLRLLYHVVDSEADFALEVVQSTRADNEGGLLVGYGDVVKPKLLELSQLSKDVLDDFKKRFNLFNTNNIWANLRAIQRLVAKDELHLDVAVHERVVSGTRTIQLETFAGGAMWCFAAHGHKVLACTVPRSRYLPVKSTSDLFLVQSNLYSIKHGNLVMSPERPFRMTPLIKLGQEFSHVEDFLVRIPHGVPNIIELDHLTVAGDVTFGTNITLKGTVIIVANEGSIIMIPDGTVLKDKVVTGNLRILDH 521          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: W7UC11_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC11_9STRA)

HSP 1 Score: 569 bits (1466), Expect = 4.900e-189
Identity = 289/481 (60.08%), Postives = 361/481 (75.05%), Query Frame = 1
Query:   79 SVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQFVKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERP--DGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            S E+ M+EA+   ++LPP QRK F++LFG+F++ R +P+L+W ++E  P E ++          DQA+RHELLDK+VILKLNGGLGT MGCT PKSAIEVR D++FLD+TVRQVEYLNS+YGV DVPL+L++SFKT   T++++ KYR HNLTIHTFMQSC PRI+K         DTLQP+P GPF E   ++WYPPGHGD++ SL+ SGLL+NLI QGKEY+FISNVDNLGATVDL++LY I D + EF    ++ TRAD  GG++  Y GK  VVELS VP +  +   KKF LF+TNNIW NLRAL  L+ +E++S+++   ER V  LK +QLET   S I+ F  V+ + V R+RYLPVKSTSDLFLVQS+LY V  G L+ +  RP      P+IKLG +F  ++DYL RIP+GVP +  L+HLTVAGDV+FG NVTLKGTVIIVANEGSVIMIPD TVL D VVTGNLRILDH
Sbjct:   21 SAEEAMREAIVTDNILPPPQRKNFMKLFGKFLESRTRPSLDWTQVEQVPSEQLMDXXXXXXXXXDQAVRHELLDKLVILKLNGGLGTRMGCTLPKSAIEVRQDMTFLDMTVRQVEYLNSLYGV-DVPLLLMNSFKTDAVTSRLLNKYRQHNLTIHTFMQSCFPRIVK---------DTLQPLPQGPFAEENEADWYPPGHGDLFQSLFQSGLLDNLIEQGKEYMFISNVDNLGATVDLNLLYFIADNDIEFCTGVVDLTRADQDGGVLTTYKGKRVVVELSQVPKQHLETVAKKFTLFHTNNIWINLRALHALLVEEKLSIDLVTHERVVDRLKILQLETTIGSVIKDFSNVLTMKVPRSRYLPVKSTSDLFLVQSSLYSVSRGMLIPNPGRPYAKDKIPIIKLGEQFVHIQDYLERIPNGVPDLLALEHLTVAGDVVFGANVTLKGTVIIVANEGSVIMIPDKTVLEDKVVTGNLRILDH 491          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: K3X633_GLOUD (UTP--glucose-1-phosphate uridylyltransferase n=9 Tax=Oomycota TaxID=4762 RepID=K3X633_GLOUD)

HSP 1 Score: 567 bits (1461), Expect = 1.990e-188
Identity = 282/493 (57.20%), Postives = 370/493 (75.05%), Query Frame = 1
Query:   52 LLHYQ---PTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQF--VKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            ++HY+   P   SVED M EA+   +L+ P QRK FL+LF ++V+ + K  ++W  ++PP  + ++ ++ +  CP D  L+HELLDK+VILKLNGGLGT++GC  PKSAIEVR DLSFLDLTVRQVEYLNS+YGV DVPLVL++SF THE T +IIRKYRMHNL+IHTF QSC+P I+K         +T+ P+P+  +  S   +WYPPGHGDVY +L+ SGLLENLINQGKEYIFISNVDNLGATV+LD+LYH+ ++++EF +E  ++TRAD+ GG +V Y  KP ++E+S VP +  D+F  + KF  FNTNN+W NLRA+QRLVA++ + +E  V  R V  +K +QLET     IQ F   + + V R+R+LPVKS+SDLFLVQSNLY ++HGSL+M+  RP  + P++KLG EF S ++Y  R   G+P I +LDHLTVAGDV FG ++TLKGTVI+VANEG+ I +PDGT+L D VVTGNLRILDH
Sbjct:    1 MMHYKTHVPARFSVEDQMAEALSSQELMGPRQRKNFLKLFRKYVKHK-KDVIDWNAVKPPTPDILLPSSSLESCPNDMNLKHELLDKLVILKLNGGLGTTLGCEGPKSAIEVRQDLSFLDLTVRQVEYLNSLYGV-DVPLVLMNSFNTHEETVRIIRKYRMHNLSIHTFNQSCYPFIVK---------ETMLPVPNTKYDRSTREKWYPPGHGDVYNALFESGLLENLINQGKEYIFISNVDNLGATVNLDVLYHMINEDSEFVMEVTDKTRADIQGGTLVSYREKPHLLEISQVPPQHMDEFRSINKFQTFNTNNLWVNLRAIQRLVAQDIIDIEPIVSSRTVKSVKVVQLETAAGEGIQFFKNFIGVKVPRSRFLPVKSSSDLFLVQSNLYQIKHGSLIMNPARPIPTIPIVKLGLEFQSAKEYAARFERGIPNIMELDHLTVAGDVKFGSDITLKGTVILVANEGAHIDLPDGTILEDKVVTGNLRILDH 482          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: D0NU40_PHYIT (UTP--glucose-1-phosphate uridylyltransferase n=25 Tax=Peronosporaceae TaxID=4777 RepID=D0NU40_PHYIT)

HSP 1 Score: 549 bits (1415), Expect = 1.390e-181
Identity = 281/492 (57.11%), Postives = 362/492 (73.58%), Query Frame = 1
Query:   55 LHYQ---PTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQF--VKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            +HY+   P   S++D M EA+   +L+   QRK FL+LF ++ + + K +++W  ++PP    +   T +  CP D  LRHELLDK+VILKLNGGLGT++GC  PKSAIEVR DLSFLDLTVRQVEYLNS+YGV DVPLVL++SF THE T +IIRKYRMHNL+IHTF QSC+P IIK         +T+ P+P+  +  S   +W+PPGHGDVY +L+ SGLLE+LINQGKEYIFISNVDNLGATV+LDMLYH+ ++++EF +E  E+TRAD+ GG +V Y  KP ++E S VP    D F  + KF  FNTNN+W NLRA+QRLVA++ + +E  V  R V   K +QLET    AI  F   + + V R+R+LPVKS+SDLFLVQSNLY ++HGSL+M+  R   + P++KLG +F S ++YL R   G+P IT+LDHLTVAGDV FG N+TLKGTVI+VANEG+ I +P+GTVL + VVTGNLRILDH
Sbjct:    1 MHYKTHMPARFSIDDQMAEALASQELMGNRQRKNFLKLFRKYSKVK-KTSIDWNSVKPPTSGMLTSNTSVESCPNDMNLRHELLDKLVILKLNGGLGTTLGCEGPKSAIEVRQDLSFLDLTVRQVEYLNSVYGV-DVPLVLMNSFNTHEETVRIIRKYRMHNLSIHTFNQSCYPFIIK---------ETMLPLPNTKYDRSTREKWFPPGHGDVYNALFESGLLESLINQGKEYIFISNVDNLGATVNLDMLYHMINEDSEFVMEVTEKTRADVQGGTLVSYKDKPHLLEASQVPPGHLDDFRAINKFETFNTNNLWVNLRAIQRLVAQDLIDMEPLVTFRTVRNHKVVQLETAAGEAIHLFKNFIGLKVPRSRFLPVKSSSDLFLVQSNLYQIKHGSLIMNPARTTPTIPIVKLGLKFQSAKEYLARFELGIPNITELDHLTVAGDVKFGSNITLKGTVILVANEGAHIDLPEGTVLENKVVTGNLRILDH 481          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: A0A024UP01_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UP01_9STRA)

HSP 1 Score: 548 bits (1412), Expect = 4.040e-181
Identity = 275/487 (56.47%), Postives = 358/487 (73.51%), Query Frame = 1
Query:   61 YQPTHSSVEDNMKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQF--VKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            + P   SVED M EA+   +LL   QRKGF++LF ++   ++ P ++W  + PPP + ++ ++ +  CP D +L+HELLDK+VILKLNGGLGT+MGC  PKSAIEVR DLSFLDLTVRQVEYLNS+YGV DVPLVL++SF THE T +IIRKYRMHNL+IHTF QS +P ++K S           P+P+  + +    +WYPPGHGDVY +L+ SGLLENLINQGKEYIFISNVDNLGATV+LD+LYH+ + ++EF +E  ++TRAD+ GG +V Y  KP ++E++ VP E  + F  + KF +FNTNN+W NLRA+QRLVA++ + +   V    V   K +QLET    AIQ F   + I V R R+LPVKS+SDLFLVQSNLY ++HGSL+M+ +R   + P++KLGREF + + Y  R   G+P I +LDHLTVAGDV FG  +TLKGTVI+VANEG+ I +PDGT+L D VVTG+LRILDH
Sbjct:    7 HAPGRLSVEDQMSEALSASELLGMRQRKGFMKLFRKYCSSKKSP-IDWKVVNPPPVDMVINSSSVEACPNDASLKHELLDKLVILKLNGGLGTTMGCQGPKSAIEVRQDLSFLDLTVRQVEYLNSLYGV-DVPLVLMNSFNTHEETVRIIRKYRMHNLSIHTFNQSSYPYVVKESA---------VPLPTAKYDKLTRDKWYPPGHGDVYNALFESGLLENLINQGKEYIFISNVDNLGATVNLDILYHMINVDSEFMMEVTDKTRADVQGGTLVTYKDKPHLLEVNQVPQEHLEDFRALNKFTMFNTNNLWVNLRAIQRLVAQDLIDINPIVSYGTVKNTKVVQLETAAGGAIQFFKNFVGIKVTRLRFLPVKSSSDLFLVQSNLYQIKHGSLLMNPDRGLATIPIVKLGREFQTAQQYSERFEKGIPNILELDHLTVAGDVKFGSGITLKGTVILVANEGAKIELPDGTILEDKVVTGDLRILDH 482          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: M4BAY1_HYAAE (UTP--glucose-1-phosphate uridylyltransferase n=3 Tax=Peronosporaceae TaxID=4777 RepID=M4BAY1_HYAAE)

HSP 1 Score: 549 bits (1414), Expect = 4.240e-181
Identity = 278/473 (58.77%), Postives = 356/473 (75.26%), Query Frame = 1
Query:  103 AVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQF--VKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            A+   +L+   QRK FL+LF ++ + + K A++W+ ++PPP   +     +  CP D+ LRHELLDK+VILKLNGGLGT++GC  PKSAIEVR DLSFLDLTVRQVEYLNS+YGV DVPLVL++SF THE T +IIRKYRMHNL+IHTF QSC+P I+K         +T+ P+P+  +  S   +W+PPGHGDVY +L+ SGLLENLINQGKEYIFISNVDNLGATV+LDMLY++ ++++EF +E  E+TRAD+ GG +V Y  KP ++E S VP E  D F  + KF  FNTNN+W NLRA+QRLVA++ + +E  V  R V   K +QLET    AI  F   + + V+R+R+LPVKS+SDLFLVQSNLY ++HGSL+M+  R   S P++KLG EF SV++YL R  HG+P IT+LDHLTVAGDV FG N+ LKGTVI+VANEG+ I +P+GTVL + VVTGNLRILDH
Sbjct:   42 ALASQELMGNRQRKHFLKLFRKYSKVK-KTAIDWSAVKPPPTGMLTNTASVESCPNDRNLRHELLDKLVILKLNGGLGTTLGCEGPKSAIEVRQDLSFLDLTVRQVEYLNSVYGV-DVPLVLMNSFNTHEETVRIIRKYRMHNLSIHTFNQSCYPLIVK---------ETMLPLPNTKYDRSTRDKWFPPGHGDVYNALFESGLLENLINQGKEYIFISNVDNLGATVNLDMLYYMINEDSEFVMEVTEKTRADVQGGTLVSYKDKPHLLEASQVPPEHMDDFRAINKFETFNTNNLWVNLRAIQRLVAQDLIDIEPLVTFRTVKCHKVVQLETAAGEAIHLFKNFIGLKVSRSRFLPVKSSSDLFLVQSNLYQIKHGSLIMNPARITPSIPIVKLGLEFQSVKEYLARFDHGIPDITELDHLTVAGDVKFGSNIKLKGTVILVANEGAHIDLPEGTVLENKVVTGNLRILDH 503          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: A0A485LCW4_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCW4_9STRA)

HSP 1 Score: 545 bits (1403), Expect = 4.870e-180
Identity = 272/476 (57.14%), Postives = 354/476 (74.37%), Query Frame = 1
Query:   94 MKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQF--VKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            M EA+   +LL   QRKGF++LF ++   ++ P ++W  + PP  + ++ +  +  CP D +L+HELLDK+VILKLNGGLGT+MGC  PKSAIEVR DLSFLDLTVRQVEYLNS+YGV DVPLVL++SF THE T +IIRKYRMHNL+IHTF QSC+P ++K S           P+P+  + +    +WYPPGHGDVY +L+ SGLLENLINQGKEYIFISNVDNLGATV+LD+LYH+ + ++EF +E  ++TRAD+ GG +V Y  KP ++E++ VP E  ++F  + KF +FNTNN+W NLRA+QRLVA++ + +   V  R V   K +QLET    AIQ F   + I V R R+LPVKS+SDLFLVQSNLY ++HGSL+M+ +R   + P++KLGREF + + Y  R  HG+P I +LDHLTVAGDV FG  +TLKGTVI+VANEG+ I +PDGT+L D VVTG+LRILDH
Sbjct:    1 MSEALAASELLGVRQRKGFMKLFRKYSASKKSP-IDWKLVTPPSADMVINSASVEACPNDASLKHELLDKLVILKLNGGLGTTMGCQGPKSAIEVRQDLSFLDLTVRQVEYLNSLYGV-DVPLVLMNSFNTHEETVRIIRKYRMHNLSIHTFNQSCYPFVVKESA---------VPLPTSKYDKLTRDKWYPPGHGDVYNALFESGLLENLINQGKEYIFISNVDNLGATVNLDILYHMINVDSEFMMEVTDKTRADVQGGTLVTYREKPHLLEVNQVPQEHLEEFRSLNKFTMFNTNNLWVNLRAIQRLVAQDLIDINPIVSYRAVKNNKVVQLETAAGGAIQFFKNFVGIKVTRLRFLPVKSSSDLFLVQSNLYQIKHGSLLMNPDRGLSTIPIVKLGREFQTAQQYSERFEHGIPNILELDHLTVAGDVKFGHGITLKGTVILVANEGAKIELPDGTILEDKVVTGDLRILDH 465          
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Match: A0A067CJP7_SAPPC (UTP--glucose-1-phosphate uridylyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJP7_SAPPC)

HSP 1 Score: 540 bits (1390), Expect = 4.210e-178
Identity = 270/476 (56.72%), Postives = 352/476 (73.95%), Query Frame = 1
Query:   94 MKEAVHMLDLLPPDQRKGFLRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLDKMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVADVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRLQLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYIFISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGKPKVVELSTVPTERRDQF--VKKFNLFNTNNIWANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 1515
            M EA+   +++ P  RKGF++LF ++   ++ P ++W  + PP    +  +  +  CP D +L+HELLDK+VILKLNGGLGT+MGC  PKSAIEVR DLSFLDLTVRQVEYLNS+YGV DVPLVL++SF TH+ T +IIRKYRMHNL+IHTF QS +P ++K S           P+PS  + ++   +WYPPGHGDVY +L+ SGLLENLINQGKEYIFISNVDNLGATV+LD+LYH+ + ++EF +E  ++TRAD+ GG +V Y GKP ++E++ VPTE  ++F  + KF  FNTNN+W NLRA+QR+VA++ + +   V  R V   K +QLET    AIQ F   + I V R R+LPVKS+SDLFLVQSNLY ++HGSL+M+  R   + P++KLGREF + + Y  R+  G+P I +LDHLTVAGDV FG ++TLKGTVI+VANEG  I +PDGT+L D VVTGNLRILDH
Sbjct:    1 MSEALAAGEIMAPRSRKGFMKLFRKYCSNKKSP-IDWKSVSPPTDTMVTNSATVEVCPNDASLKHELLDKLVILKLNGGLGTTMGCQGPKSAIEVRQDLSFLDLTVRQVEYLNSLYGV-DVPLVLMNSFNTHDETVRIIRKYRMHNLSIHTFNQSSYPFVVKESA---------VPLPSAKYDKATQEKWYPPGHGDVYNALFESGLLENLINQGKEYIFISNVDNLGATVNLDILYHMINVDSEFMMEVTDKTRADVQGGTLVTYKGKPHLLEVNQVPTEHLEEFRSLHKFTKFNTNNLWVNLRAIQRMVAQDVIDINPIVSYRTVRNHKVVQLETAAGGAIQFFKNFIGIQVPRLRFLPVKSSSDLFLVQSNLYQIKHGSLLMNPSRGLPTIPIVKLGREFQTAQQYAERLERGIPNILELDHLTVAGDVKFGSDITLKGTVILVANEGCKIDLPDGTILEDKVVTGNLRILDH 465          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKF0_ECTSI0.000e+090.65UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A6H5KVD1_9PHAE4.560e-27787.55UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A836CA96_9STRA6.110e-24271.83UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
W7UC11_9STRA4.900e-18960.08UTP--glucose-1-phosphate uridylyltransferase n=2 T... [more]
K3X633_GLOUD1.990e-18857.20UTP--glucose-1-phosphate uridylyltransferase n=9 T... [more]
D0NU40_PHYIT1.390e-18157.11UTP--glucose-1-phosphate uridylyltransferase n=25 ... [more]
A0A024UP01_9STRA4.040e-18156.47UTP--glucose-1-phosphate uridylyltransferase n=5 T... [more]
M4BAY1_HYAAE4.240e-18158.77UTP--glucose-1-phosphate uridylyltransferase n=3 T... [more]
A0A485LCW4_9STRA4.870e-18057.14UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A067CJP7_SAPPC4.210e-17856.72UTP--glucose-1-phosphate uridylyltransferase n=3 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:306749..316330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score944.1
Seed ortholog evalue2.7e-272
Seed eggNOG ortholog2880.D7FKF0
Preferred nameUGP2
Model size3478
KEGG rclassRC00002
KEGG koko:K00963,ko:K02987,ko:K17260,ko:K17491
KEGG ReactionR00289
KEGG Pathwayko00040,ko00052,ko00500,ko00520,ko01100,ko01130,ko03010,ko04138,ko04212,ko04530,ko04922,map00040,map00052,map00500,map00520,map01100,map01130,map03010,map04138,map04212,map04530,map04922
KEGG ModuleM00129,M00177,M00179,M00361,M00362,M00549
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0005515,GO:0005536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005984,GO:0005985,GO:0005991,GO:0005992,GO:0006011,GO:0006065,GO:0006073,GO:0006077,GO:0006078,GO:0006082,GO:0006091,GO:0006112,GO:0006139,GO:0006464,GO:0006486,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009250,GO:0009267,GO:0009277,GO:0009311,GO:0009312,GO:0009555,GO:0009605,GO:0009628,GO:0009651,GO:0009986,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010494,GO:0010941,GO:0010942,GO:0015980,GO:0016020,GO:0016036,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019103,GO:0019255,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0030246,GO:0030312,GO:0030445,GO:0030587,GO:0031154,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0032553,GO:0032557,GO:0032991,GO:0033036,GO:0033037,GO:0033554,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036094,GO:0036211,GO:0036296,GO:0036464,GO:0042221,GO:0042545,GO:0042594,GO:0042802,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043413,GO:0043436,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046351,GO:0046394,GO:0046398,GO:0046483,GO:0046686,GO:0048029,GO:0048229,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051273,GO:0051274,GO:0051641,GO:0051703,GO:0051704,GO:0051716,GO:0051748,GO:0052386,GO:0052543,GO:0052545,GO:0055086,GO:0055093,GO:0055114,GO:0065007,GO:0070085,GO:0070482,GO:0070569,GO:0070727,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0090406,GO:0090702,GO:0097159,GO:0097367,GO:0099120,GO:0120025,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons8
EggNOG free text desc.Utp--glucose-1-phosphate uridylyltransferase
EggNOG OGsCOG4284@1,KOG2638@2759
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-12_002300.1
EC2.7.7.9
Cds size1518
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01009,ko03011,ko03400,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.726.1prot_Ecto-sp6_S_contig100.726.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 306749..314370 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.7710762-CDS-Ecto-sp6_S_contig100:306748..3070731682348723.7710762-CDS-Ecto-sp6_S_contig100:306748..307073Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 306749..307073 +
1682348723.7837834-CDS-Ecto-sp6_S_contig100:308839..3089621682348723.7837834-CDS-Ecto-sp6_S_contig100:308839..308962Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 308840..308962 +
1682348723.7925642-CDS-Ecto-sp6_S_contig100:309361..3095191682348723.7925642-CDS-Ecto-sp6_S_contig100:309361..309519Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 309362..309519 +
1682348723.8016129-CDS-Ecto-sp6_S_contig100:310330..3104591682348723.8016129-CDS-Ecto-sp6_S_contig100:310330..310459Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 310331..310459 +
1682348723.8110802-CDS-Ecto-sp6_S_contig100:311513..3117641682348723.8110802-CDS-Ecto-sp6_S_contig100:311513..311764Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 311514..311764 +
1682348723.820442-CDS-Ecto-sp6_S_contig100:312438..3125831682348723.820442-CDS-Ecto-sp6_S_contig100:312438..312583Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 312439..312583 +
1682348723.8294134-CDS-Ecto-sp6_S_contig100:313293..3135721682348723.8294134-CDS-Ecto-sp6_S_contig100:313293..313572Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 313294..313572 +
1682348723.838619-CDS-Ecto-sp6_S_contig100:314262..3143701682348723.838619-CDS-Ecto-sp6_S_contig100:314262..314370Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 314263..314370 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.8481638-UTR-Ecto-sp6_S_contig100:314370..3163301682348723.8481638-UTR-Ecto-sp6_S_contig100:314370..316330Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 314371..316330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.726.1

>prot_Ecto-sp6_S_contig100.726.1 ID=prot_Ecto-sp6_S_contig100.726.1|Name=mRNA_Ecto-sp6_S_contig100.726.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=506bp
MAHSRRRSMRPEAGLESLLHYQPTHSSVEDNMKEAVHMLDLLPPDQRKGF
LRLFGQFVQQRQKPALEWARLEPPPREAIVQATDIPPCPKDQALRHELLD
KMVILKLNGGLGTSMGCTWPKSAIEVRNDLSFLDLTVRQVEYLNSMYGVA
DVPLVLLDSFKTHETTAKIIRKYRMHNLTIHTFMQSCHPRIIKASTRMRL
QLDTLQPMPSGPFGESPPSEWYPPGHGDVYYSLYASGLLENLINQGKEYI
FISNVDNLGATVDLDMLYHIFDQEAEFAVEAIERTRADLTGGLVVGYGGK
PKVVELSTVPTERRDQFVKKFNLFNTNNIWANLRALQRLVAKEEMSLEVN
VRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLV
QSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTIT
QLDHLTVAGDVMFGENVTLKGTVIIVANEGSVIMIPDGTVLRDSVVTGNL
RILDH*
back to top

mRNA from alignment at Ecto-sp6_S_contig100:306749..316330+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.726.1 ID=mRNA_Ecto-sp6_S_contig100.726.1|Name=mRNA_Ecto-sp6_S_contig100.726.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9582bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:306749..316330+ (Ectocarpus species6 EcLAC_371)
ATGGCGCACAGTCGACGGCGGTCGATGCGGCCCGAAGCTGGCCTGGAATC TCTGCTCCACTATCAGCCTACACATTCTTCCGTCGAAGATAACATGAAGG AGGCAGTGCACATGCTCGATCTGCTCCCTCCGGACCAGCGCAAGGGATTT CTTCGTCTGTTCGGGCAGTTCGTCCAGCAACGGCAAAAGCCCGCCCTGGA GTGGGCAAGGCTGGAGCCCCCACCCAGGGAGGCAATAGTGCAGGCGACGG ACATACCGCCGTGCCCGAAGGACCAGGCCTTGCGCCACGAGCTGCTGGAC AAGATGGTCATTCTCAAGCTGAACGGTGAGAGACTTGGATGCAAGATGAT GAGGGCCAGCACACACTACTACTGCTGTACACCCAGCGCGAACCTGCTAT ATACACACGCTTGACTGCCAAGCTTGGTGAAACCTAAGATCGGTGTTTTT TTCATTTGCGGGAACGGCTCGTTTGTTTCCTGGAAGCAGTTGCAATGGAG AGCGTACTAGCGTATCCCGCCACCAACTCGAACTCTGGCAGCAGCAGAAG TCAGTTCAGTCAGTCACGTTCCTACCGAACATCCCTCCCTGTGACCGGCA TCGAGAGTCGTTTACAACAAACAGCCCATGAGCGGTGTGCGGCAAGAAAA GATCCCTTTCCAAGCGTAGCAGCAGACGGCGGTGCGTGCAGCAGCAGTGC TCAAAGCGCTGTTGTGGTGCTGCCCTGTTGCTCTGTCGAAACCACAGCCG GCCTGCTTTCGGTCCGCATGTTCTCGATGGTACCTGAGAAGAAGCAGTAC TTGCTTTGCGGTGTTTTTCTCGGTGTTCTTCTCCTCCGGTCCCGGGGAAC TTCAACGCGGTTGTACGCATTAGATATTGCGTGTATCATACATACGCGCC AGTACCCTAGAGACCTAGAGACGTCCAAACGCCGCACCCCAACGCCTCCA CGTCAACCATGTTTGATGTTGTCGGTTAGCAACGTTGTTCCCCCGTGTGC AATGGGCGCCTTCTCGCCCTTGCATCTGCGAGTTTGTTCGTGTTTTTATT TCGTACAAGTAGTGTGTCCCGGGTCCGTTAGACGAGAACAAAGGAGAAAA ACACGATTTGACACTAACTACGCATTTGTACTGCCGTTTGGGACAAAAAC CTTCCCGCCAACGGATTGCTTACATTAACGAGGACCCGCGGCACGTAGTC GAGCGAACCGCGTTCGTTCACATTGTTTGCTGCGGGGTATTCAAAAAAGA AGGCTGGGGCGTGCATTTGTGTTATCCTCTCCATGTCAAGGAGAAAAGAA CGAGTTACAGAAGTGGTGGCCTGGTACTGAATACCGCCGAAGTTTTATCG CTTCAACAGCGAGGCACCGACTCCCACGCATCGTCATTCCAGCAAGCTGT CTACCAAAGCGTACGCAGACGCTGCGGTGGATTGCCCCAGCAGAATTGCG CGAGGGGGGGTGATACGCATGCAGATATATACGCCCTTCTAAAGATGTTT TTGACACCGTCGCTGGCGCCACCGCCGAATCAGCGCGAAGTGCTCAAAAC TTACCTCGGTCCAGAATTGTCCCCGCCAGGCGTCAGCGAACATTCCATTG CTATTCAAGTGCTCAACACGCACGCAGAACTCGTTGTCTGTCTCGGGTGG GCAGTGTTATTTTCACAGCCAATACCATCACATATGTCTATGTAGTATTC TCGAATATAATCGATTTGGCCTCGAATCGCGATGAAGAGTCCAGGGTGAA AAACGAAAAAACGCTACGGAGGTCGTGAGAGTATGACCGCCGAGTGATTG TCTCCGCTAGTGGTCGCGTCAGAGAGGGAAAGGTGGCGAGAGCTAGGTGC CCGTATGTAGGCCTTGCGAAAGACTTGTCTCTGCCTCGCCCTTAGCGACG GCCCCAACGAAGGCTGACGCGACTCAGCGTTCCGTTCGACAACATCCACC CGCGCTGCTGCCGTAGCGTCGTGCACTCGTGCGCACAAGGAATGTTGCTG AACACAGCTAGTAAATGTGACTTGCTGTTACGTGCGCCCTCGTTCCACCA ATCAAATCAATTTGGTCGCGTTTTTTTATTTTTTTCGGCAGGCGGGCTCG GGACGAGCATGGGTTGCACGTGGCCCAAGTCGGCGATAGAGGTGCGGAAC GACCTCTCCTTCTTGGACTTGACGGTGCGACAGGTGGAATACCTCAACAG CATGTACGGAGTGGGTGAGTCACCACCACGACGAAGGAGCTGTGATACTT GGGACCGTCGTTTTGCCGTCCAAAGAAGAGAGTGAGCTTCTCGAAAGACG ATCCGTTCCGGCCGGAAACAGACCCGCTCTCTAGTGAGTCCTATGTCGTG CATTTTGTTTCGGCCGCGCACATCCATCCTCCAATCTTGCTTGCGGCTGC TGTGTTTGCGATTTCGCTGTGTTTGCGATTTCCGCCAATGCGGTCGATGT TCCGTGTATTCAGGTGTTCCTGGGTGAATCGGTCGTAACGCGCGTGTCTT CTTGTCGCCCCTTCTGGCCTTATTTGTGCAATTAACTTGGCGACCTCGAT GGCGGGCGCCGGGCCGACCATCACTGCTGGCGCCGCGGCCGCGTGGTGTG GTGTGCGTCGGAGCAGACGTTCCCTTGGTGCTTCTGGACTCTTTCAAGAC GCACGAGACCACCGCGAAGATCATCCGGAAGTACCGCATGCACAACCTGA CCATCCACACCTTCATGCAGAGCTGCCACCCCAGAATTATCAAGGCGAGT ACGCGTATGCGTCTCCAACTTGTGGCACGCCGCGACGGTGGGACGGATCG CAGCATTATCGTCCCGATGTTGCTAGTTGTGCTTCGTGGACGGGACTGCT GTTCATGATGCATCCGCCCTACCCGTATCACGAGCTTTGGCGTTTAACTT CTCCACGACGGGAGTGATGGATTGGCAACACGGAATGATACACGTGTCGG ACTTGTCTTGTTGATAAATTACCCTGCTGGGGCAGGCCAATCCTCGGCTC ATTTTTCTTGTCATCGCCGCGGTTGGTAAGAAAGCATTTTGTCTTGGTGA CAAAAGCGTCTCGAAGGTCGTCAAGGCAACCGTCGACACCTGTCATACCG ACGACTTGGAACGCTATGCCACGCGGTTTGTGGTACCAAGGGGGCGAGAT GCTTGCGTTGTCCAGTACAAAGAGGGAACAACGAAGTGTTCTGCTGAGAC GTCGCCGGGACTAGCTTCATGTCGGGGGCAGCAGAGCAGAGGGGTGTGGA TACTGCGGCGAATGGACGGGCTTCTTCCGCCGAAGAGCACGGAAGGAAGG AGCACAAGCGATGTGATCTATGCGTAAAGAAAGACGTTCCTGTCGTCTTG ATCGTTCGGGACGATTGTGCCCCGGACGCCGGGCAAGCCCGCCCCTCCCC CCCCATGATTCTTTTTGGGACACTGCGGTGCCCCTCCTTCAATCTCGCGA GCTGGCGGCCTGCTTGCCGTGGCGTCGGCGAGAAAGGTTCTTTTGCAGTG ACGCCGTTTTTCCCTCGCCCGCTGCGCGTGCGGCGTCTCTGCTCTCGTGT CGTGTTGTACCTTCCTTCATCCTCTCCGACAGGACACTCTGCAGCCGATG CCTTCGGGGCCGTTCGGGGAATCCCCCCCATCGGAGTGGTATCCTCCAGG TCACGGGGACGTGTACTACTCGCTGTACGCCTCGGGCCTCCTGGAAAACC TCATCAACCAGGTTAGCTGACCGCCTTCGCGACGGTATCAAGCGTCAATA TGCGACACAGAGAGGCGGAGTTTGTCGTAATACTAATCCCAACCCTTAAC CCCTACTCAACCCAAGCTAGTATCCTCTTGAAGGCTATAGTATTAGTACT GCCGTGGGCGCGGATGGACGTGTGTTGTTTTTGTCGCGTGCTGTCGGAGT TGTGTGTGGGTAAGTCTGGCATCAATCAATGTGGCGAGCGTCGAGAACGC ATACGCGCGCCCGAGCCGCGTAGGCAGTCCTGTGTGCGTCCTGGATGTAC AAGCGGCAGACGTGTTGTGGGATGTGCGATTCTAACAGCGGTGCAAGCGG GCCACGGCCAGCCTGTTTTGGGGCTTTTACCCTCTGTAGTACCGCTACGT GCGTACGGCGTGGCTTGCACCCAGATTTCGTTGCTCCGCCTTACCCCCAT CGCAACTACCCCCCCCCTTTGTATGCCTCCGCTACCTGAAAAGCACCCTT GATTCTCCTTGATTCCTTGTGCGTTCATCGTTCATGCTGTGAACACGCGA GAGTTCCTGGTGTGTGGTTTGGCTTTCCTTTCCTTTGCGACCACCGTTGC GGCTGCCCATTACGTGTATGTTTGTGCATCTTTCTTGTGTGATGGAAAGG ATGCTGCCGGTTTGTGTCGCTTGGTTCTCCCGTTCCTGCTCCAAAACACA GCCGGCCTCTGGTACGAGTTTTAGGTTGTACCATTTCTCAACAACGTATT TCTGACAATACCGAAAACACGATGAACAGCTGGCCAATGACAAGGTGTCA GGATAAGCGGGACGAAAAACCCTCGACGTCTGTGTGGGTGTAGGTGTGTT TTTCATTACTATCGACCGCGCCAAACGACCGACCAAGAAAAGACGTCAGT CTTCGTGCAGCCAAGAACGGAGAAACGCTTCTAAGGTCATGATCTAGGTT TTCCTCCGGACTGAAGACAGAAACGGGTGTGTGTGTGTCCCTTTTTTCAG CAACGACCCCGCCAACCGGCAGACGCACGAGACGCTAACCGGCTGACCAA CGAATAAATCTTTAGGGCAAGGAGTACATCTTCATCAGCAACGTGGACAA CCTCGGGGCCACGGTGGACCTGGACATGCTGTACCACATCTTCGACCAGG AGGCCGAGTTCGCTGTGGAGGCCATCGAGCGCACGAGAGCCGACCTGACG GGCGGGCTGGTGGTAGGGTACGGGGGCAAGCCCAAGGTGGTGGAGCTGAG CACGGTGCCGACGGAGCGAAGAGACCAGTTCGTCAAGAAGTTCAACCTCT TCAACACCAACAACATGTGAGCTGCTGCAGGGCGAACGCAAAGTGCCCTA TGGAACCCTCCCCCCCTCACACCTTTGGCAAAGCAAGAAGGAACGATTGG CCATCGGCGATCGGTCCTGTGAGAACAACGCTCCGTCCTCTCGAGAGAAC GTGTGGTCAATGGTATATGAGCACGAAGGCATGCGAAATACGCCCCCCCG TGTTTGTTGTTTGTTTGGAGGTCCGTAGCGAGGGCGTGAGTATGTGAACG AGAGCGCCGTCTTCAGTATGTAGATGGAAATGAAAGTGGCCGGTTTACCC CGCCCCACCCCCCGCCTCGTGTGTCGCTCTTCCGGGAGAGAGCGTTGTCG CAGGACGTCGTCGCAAGACGTCGTGTTTTTGAGTATTTTTGGCTACAAAT ACGCGCCCGGTCGTGCCTGCTCATTCTCCCCTTGGTGCCGATCACTACCG TCTCATTGTTTTTCTGTCGGGAGGTGGGGGGAGGGGCGGGGCGATCGGTC GTAGCTGCTGCTGCTCCACGTAGTTCACACCTTTCTCTGTGGAGGGGTTG GGCGATCAGTCGCAACTGCTGCTGCTCGACGTAGTTTACACCTTTGTCTG CTCGTGCTGTGCACCCGATGCAAATACCGTTTCCGTTCCCGTGTACCTCT CCGTTGCGGCTGTTGCCTCAAACGGCCGTGGTGTTCGTAGATGGGCAAAC CTGCGCGCGCTGCAACGACTAGTCGCGAAGGAGGAGATGTCGTTGGAGGT GAACGTGAGGGAGAGGCAGGTCAGCGGGTTGAAGACCATACAGCTGGAGA CGTGCGGGGCTAGCGCGATCCAGTGTTTCGACAAGGTACAGTACTACAGT GTACACCAGGTTTCACTATTGCAGGAATACTGCTGAATTCAATGTGGTAT GCCGTTTGCCACTTGATGGTGGGTGGGGATGTGCTTCAGTGTTTTTATGT TTCCATTTATCATGATGCCTATGACGCCACCAATTCAGCACTGGTGCTGG ATGTGTTGCTTGCTTCAGTGCGAAAGCTGTTGATTTTTACTTCCTACACA ACGTTTTGCTCTCGCACCTGCTAAGTCGAACATCAATTCCTTGAAACAAA AATGTGTGGTCTGTGTGCCATTACACGCGTTTTGCATGGGAGGCTAAGGT AGGCCATTGGAATGTACCGTACATTGTGTAACAACGGGTGTGTGGACTAG GCGTGAACAGGCGTTTTTCTGCACAACGTTGTACGAAACCGTTTGTTCCG TAACGGCTATCGTTTTCTTTCGGACACAAAAATAGTACGGTACTCCAGAA GGAGACCGTCTTGAGGGCGTCCAACGAGAAATACATGAGCCCCCTTTCCA TCCCGTCCCGCTCCCGTTGCGTTCCGTTCCGTCCCACCCCCTTTCCGTCC CTTTCCGCCCCATTCCGTCCTGTCCCGCTCCCTTTCCGTCCCGTCTCGCT CCATTTCCGTCCCGTCCCCATCCCGTCCCGTCCCATTTCGTCCCGTCCCG TTCCCTTTCCCTCCCTATCCGCCCCGTTGCGTCTCTTGGCGCCAGGTTAT GGCCATCGTCGTAAATCGAGCCCGATATTTACCCGTTAAGTCGACGTCGG ACCTCTTCCTGGTCCAGTCCAACCTGTACGGGGTGAGGCACGGGAGCCTC GTCATGTCGGCGGAGCGGCCGGACGGCAGCACCCCGCTGATAAAGCTCGG GAGGGAGTTCACCTCCGTGGAGGACTACTTGCGGAGGATACCACACGGCG TGCCCACCATCACGCAGCTTGACCACCTGACGGTGGCGGGGGACGTCATG TTCGGGGAGAACGTGACACTAAAGGCGAGTGATGCATTTTTTTTCCCACG GATGTTTTGTCTCATGCTCGTTGGCTGTGTTCCGCTCTTTTTTGTTCAAG CGCTTTCCTCCTGATTTTTCTGCGGAACGTATGTATACACAAGGTTCTTG TGCGCGCATTAGTGCGTTGCGTGTTGGGGAGGGGCTTGCGCCGCGTGGGG CTGCCACCGCTCTAGCGATCGCCGGTGGGCACTTTGCGTGGGAAAGTTAA CCTAACCTGGAGCCAACAGCTGTGGTTTTTGCAGCATAATTGTGCAACAT GGCACATACACACACTCCGCCTCAGGCGATCGAGTAGCTCGAGCTCGAGC TTGAAAGAACGTTGCCGGGAGAGACCACGCGGCGGCCAACTCTCTAGCTC TCACGTGATTCACGTGCGCCGCCTTTTATTACCCTTGGTTGCTTCATATC CCGTCGTCACCATCATGGCCGAGTCATTCGCCGACCTCCAATTTGTTCTT TTAAACTAAAATATTACAAATCTGCAAACCACTGCAATAAAAGAACAAAG TTTTGTTTTCTGTATATATTTATTGTCTTTTTTGAACCACAAGTCATCTC TTCCATACATGAGAAAGAGTCCGGGATAGATTGGCAACGCATTCATGGCG TGTCTGTTTTTCATATCCAATTGTTTTTGTTGTCCCGCGTGCTGCCTCCG CCCGGTCGGTGCAGGGGACGGTCATCATCGTCGCCAACGAGGGGTCCGTG ATCATGATCCCTGACGGGACGGTACTCAGAGACTCAGTCGTCACCGGGAA CTTGCGCATCCTCGATCACTAACCCGGCGGAGCGGCGGAACGGGGGGGCT GGTTATCTTTGCCTGGCCGGAGCCAACAAAACAGGGAGTTGCCCGGCAAC GGTTCACCTGGAACGGATCAGCCGTTCGGCGTGCCTGCGACCGATATACT GGGGTCGGTTCCTTTGGACGGATGCCGATCGGTTGGTCGTCGCTTGGGTG GGTTTTCAAAGCCGATCACTCGAGCAGCTAGGTAGCTCCGGGGCTTCGTT CCTCTTGGCCAGAAAGTCAATCAGATCGCTTGAGATTTGGGTCCTGCCTC TCTTATCCTTCGTGAGTTTTGTGCACAGGAAATACCACGAGGACCGCTAC TGTATTAGCGCCCCTGCGTTGTCTGTCTGCGAATCACTAGGTGATGGATT GGTTTTCTTTCTTTTTGTTCTAGAACAGGAAACCACGGGATGGATTTTTA GGAAACATCTACCTCTCGCTGTAGTCGTTTTGTGTGTTGGTTGCACCCCT CGTCCGGATGTTGATGCCCGCGCGTTGTTCAAGGAAGAGTCGATATGGCA CCCAAAAGTTAGAAACAACCCCTAACAACGTTTTTTCCGCCGCATCTTGT AGAAACTGTCTTCTTTTTTTTTTCTCTGTGGTACCACGTGCACGGCTGTC CCTCGACTCACGGTCGGCAGTGGTGTGTGTATGGAGCCAGGACTCGCCTG GTTAGCTACCACACGTGTGTGTGTGTGTGTCGTTGGTGTTTTTTCGCCCT CGTTTTGCGGACAAGGCGTTGTAGTCCTTTGCTTAGAACGTATACATAAT AAACAAACACAGAACGGCTACCCGTTCAAGATACAACCACAGCAGTCGAA AGGGATGTGTTCAAGCAAGACTTTTCAGCGAGTGGAGGGAAACCTTGTTT CGTCGTTGGCCGTATGCGTAGTTGGTGTCGTTTTTGTTTCGGTTTAGCGT TAACCCGACGCGCTCAGTCTGACCAGGCCCGCCCTCAAGGCGTAGTCTAG TCTGACATTGCAACCCGGTTTTTATTTAGAAACAAAGTATCATAGGCGCG CAAGGGGGGGCGGGGCAGGGCCATCATATCAGAGGTATGTACTGGCGCTG TACCAGTTCGAATGTTTTGTACAAACGTTGGTTTCCGGTTTATAATTCCA AGAAGAAAATCGGGACAAGGGGATGCGCGAGAGGGGTCGGTACAACGTAT AACGAACGACTTTTCTCGCATTCTTTGCATGGGACGGGTGTTGCAGCGTG TTGGCGGTATCTTAGTCGTCGGCGCTGCACCAGCGGGCAGGACTTTTGGC ATCTAAACGGGAAGACATGGTTGTCGAGGCGTTCTTTGCCAAGGGGCCTC GAGAGCGCAAGAGCGTGGCGTTAGCCGCGTGCATTGTTGCTCGAGTCGTG GCGAATTGCAAAACCGCAGGCTTGCGTGTACAGTATGGAAGAAGACCCGA TCGCAAGCATCGCTACAGGGTGTGTGGCAGCGCCCGCCGCCCGTTTTGGA CGCCTTGCAGATCTAGACCCGCCCCGTGTCGTGCACTCTGAAACCCGAAC GCCCCCCTCTTCTTTCTCCCCCCTTCGCGCATGGGAGTCAAGCTCAGTAA AGTTCGTGAGAGAGAGAGAGAGCAGGCATGCGTGGGAAATAACGGCATAA ATATTGATTTCAATGCATCTAGAACGAGCACGTACCGCTGCCATCTGTCA CATGACACGGGAACGGATACAAGATAGAGCCATCAGATATGAATGCATAA GTGCGTCAAGAGACCGCGAAGAAAACAACGATGACAGTCTTCTTTCCATC TTGCAAGAGATTTTTGACTTGGAAAAGAAAGTGTTGCGACATGGCGCGTG TCGTCTGGAGTGGATATGACGCCCAATTTCTACGTATGGGTGTGTGTGTG TGCATATGTATCGGGGTGAGGCCCTGTAGCAGGGTACCAAGTATCTGGGA GGAACGACAACCAAACAACAAACTAAACGGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:306749..316330+

>mRNA_Ecto-sp6_S_contig100.726.1 ID=mRNA_Ecto-sp6_S_contig100.726.1|Name=mRNA_Ecto-sp6_S_contig100.726.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1518bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:306749..316330+ (Ectocarpus species6 EcLAC_371)
ATGGCGCACAGTCGACGGCGGTCGATGCGGCCCGAAGCTGGCCTGGAATC
TCTGCTCCACTATCAGCCTACACATTCTTCCGTCGAAGATAACATGAAGG
AGGCAGTGCACATGCTCGATCTGCTCCCTCCGGACCAGCGCAAGGGATTT
CTTCGTCTGTTCGGGCAGTTCGTCCAGCAACGGCAAAAGCCCGCCCTGGA
GTGGGCAAGGCTGGAGCCCCCACCCAGGGAGGCAATAGTGCAGGCGACGG
ACATACCGCCGTGCCCGAAGGACCAGGCCTTGCGCCACGAGCTGCTGGAC
AAGATGGTCATTCTCAAGCTGAACGGCGGGCTCGGGACGAGCATGGGTTG
CACGTGGCCCAAGTCGGCGATAGAGGTGCGGAACGACCTCTCCTTCTTGG
ACTTGACGGTGCGACAGGTGGAATACCTCAACAGCATGTACGGAGTGGCA
GACGTTCCCTTGGTGCTTCTGGACTCTTTCAAGACGCACGAGACCACCGC
GAAGATCATCCGGAAGTACCGCATGCACAACCTGACCATCCACACCTTCA
TGCAGAGCTGCCACCCCAGAATTATCAAGGCGAGTACGCGTATGCGTCTC
CAACTTGACACTCTGCAGCCGATGCCTTCGGGGCCGTTCGGGGAATCCCC
CCCATCGGAGTGGTATCCTCCAGGTCACGGGGACGTGTACTACTCGCTGT
ACGCCTCGGGCCTCCTGGAAAACCTCATCAACCAGGGCAAGGAGTACATC
TTCATCAGCAACGTGGACAACCTCGGGGCCACGGTGGACCTGGACATGCT
GTACCACATCTTCGACCAGGAGGCCGAGTTCGCTGTGGAGGCCATCGAGC
GCACGAGAGCCGACCTGACGGGCGGGCTGGTGGTAGGGTACGGGGGCAAG
CCCAAGGTGGTGGAGCTGAGCACGGTGCCGACGGAGCGAAGAGACCAGTT
CGTCAAGAAGTTCAACCTCTTCAACACCAACAACATATGGGCAAACCTGC
GCGCGCTGCAACGACTAGTCGCGAAGGAGGAGATGTCGTTGGAGGTGAAC
GTGAGGGAGAGGCAGGTCAGCGGGTTGAAGACCATACAGCTGGAGACGTG
CGGGGCTAGCGCGATCCAGTGTTTCGACAAGGTTATGGCCATCGTCGTAA
ATCGAGCCCGATATTTACCCGTTAAGTCGACGTCGGACCTCTTCCTGGTC
CAGTCCAACCTGTACGGGGTGAGGCACGGGAGCCTCGTCATGTCGGCGGA
GCGGCCGGACGGCAGCACCCCGCTGATAAAGCTCGGGAGGGAGTTCACCT
CCGTGGAGGACTACTTGCGGAGGATACCACACGGCGTGCCCACCATCACG
CAGCTTGACCACCTGACGGTGGCGGGGGACGTCATGTTCGGGGAGAACGT
GACACTAAAGGGGACGGTCATCATCGTCGCCAACGAGGGGTCCGTGATCA
TGATCCCTGACGGGACGGTACTCAGAGACTCAGTCGTCACCGGGAACTTG
CGCATCCTCGATCACTAA
back to top