mRNA_Ecto-sp6_S_contig100.720.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE) HSP 1 Score: 1187 bits (3071), Expect = 0.000e+0 Identity = 726/849 (85.51%), Postives = 744/849 (87.63%), Query Frame = 1 Query: 1 MASAPASPRAAADGEQRDLSPRGSPAGSDWSSGRLTPSIMERVQAKVVRSDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDASSTLTQQQXXXXXXXESSLMLERXXXXXXXXXXXXXXXXXXXXXXXXXXGRHTSSSSRVGDEDDDQGKD--PGQGARRKLTWSENGERGRSSSSLTVEXXXXXXXXXXXX-----------GEDHCLSVSGPSSNDASNSSFSLPAAAAVDTPHAVAVALEPLEASPNGGVGEQQQSAAEGVGGKEEADGGAFAVEGNGRGGKGEGEDGGDAGLTVSDEYESEVDVLGVEGSPVTAVSLGATTGGGKVPSKGEDFKVALAALGEGWLVGDSGNAAGEGNQAERPKGKGAAVRVSTEIPCQLQDFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDAIRKRKPAMPVRTVTSGGDESDDEDRIRATREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDEVESRPRAKSATAAA---PTMAAVPPRAPAQDAAPLRKRGYSGVGFDRKRGSSSGXXXXXXXXXXXAGGRGG----------GRKLVAAMDTTGYVVVPPVESLSSWLFSFQAVPWLLLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDGG 2469
MA+APAS AA +GEQRDLSPRGSPA SD SSG+LTPSIMERVQAKVVRSDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDAS+TLTQ Q ESSL+LER XXXXXXXX R TSSSSRVGDE+DD KD PGQGARRKLT ENGE+GRSSSSLTVEXXXXXXXXXXXX GED+CLSVSGPSSNDASNSSF LPAAAAVDTPHAVAVALEPL+ SPNGGVGEQQQSAAEGVGGKEEA G AFA EGNGR GKGEGED GDAGLTVSDEYESEVDVLGVEGSPVTAVSLGATTGGGK PSKGEDFKVAL ALGEGWL+GDSGNAAGEGNQ ERPKGKGAAVRVSTEIPCQLQ+FFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDI+MSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDA+RKRKPAMPVRT TSGGDESDDEDRIRATRE XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX EV SRPR+KS P+ AAVPPRA AQDAAPLRKRGYSGVGFDRKRGSS G RGG GRKLV AMDT GYVVVPPV+SLS+WLFSF AVPW+LLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDGG
Sbjct: 1 MATAPASTGAAVNGEQRDLSPRGSPADSDCSSGKLTPSIMERVQAKVVRSDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDASNTLTQPQQHAA---ESSLILERELDLSSSRENEDPXXXXXXXXRHHA--RRTSSSSRVGDEEDDHSKDLEPGQGARRKLTRPENGEQGRSSSSLTVEXXXXXXXXXXXXXXXXXXXXXXXGEDNCLSVSGPSSNDASNSSFDLPAAAAVDTPHAVAVALEPLKTSPNGGVGEQQQSAAEGVGGKEEAGGEAFAAEGNGRAGKGEGEDEGDAGLTVSDEYESEVDVLGVEGSPVTAVSLGATTGGGKTPSKGEDFKVALTALGEGWLLGDSGNAAGEGNQGERPKGKGAAVRVSTEIPCQLQEFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDILMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDALRKRKPAMPVRTTTSGGDESDDEDRIRATRERLXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXEVGSRPRSKSXXXXXXXXPSTAAVPPRAQAQDAAPLRKRGYSGVGFDRKRGSSGGALPERK--------RGGSXXXXXXXXEGRKLVGAMDTAGYVVVPPVDSLSNWLFSFAAVPWVLLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDGG 836
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI) HSP 1 Score: 1117 bits (2888), Expect = 0.000e+0 Identity = 713/835 (85.39%), Postives = 716/835 (85.75%), Query Frame = 1 Query: 118 MERVQAKVVRSDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDASSTLTQQQXXXXXXXESSLMLERXXXXXXXXXXXXXXXXXXXXXXXXXXGRHTSSSSRVGDEDDDQGKD--PGQGARRKLTWSENGERGRSSSSLTVEXXXXXXXXXXXXGEDHCLSVSGPSSNDASNSSFSLPAAAAVDTPHAVAVALEPLEASPNGGVGEQQQSAAEGVGGKEEADGGAFAVEGNGRGGKGEGEDGGDAGLTVSDEYESEVDVLGVEGSPVTAVSLGATTGGGKVPSKGEDFKVALAALGEGWLVGDSGNAAGEGNQAERPKGKGAAVRVSTEIPCQLQDFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDAIRKRKPAMPVRTVTSGGDESDDEDRIRATREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDEVESRPRAKSATAAAPTMAAVPPRAPAQDAAPLRKRGYSGVGFDRKRGSSSGXXXXXXXXXXXAGGRGGGRK---------LVAAMDTTGYVVVPPVESLSSWLFSFQAVPWLLLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDGGGGVVGNRTAASRTALTGELARGLMRIYCRHRFLWPFSRFC 2589
MERVQAKVVRSDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDASSTLTQQ XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX RVGDEDDDQGKD PGQGARRKLTWSENGERGRSSSSLTV GEQQQSAAEGVGGKEEADGGAFAVEGN GDAGLTVSDEYESEVDVLGVEGSPVTAVSLGATTGGGK+PSKGEDFKVAL ALGEGWL+GDSGNAAGEGNQAERPKGKGAAVRVSTEIPCQLQDFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDAIRKRKPAMPVRTVTSGGDESDDEDRIRATREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPD VESRPRAKSATAAAPTMAAVPPRAPAQDAAPLRKRGYSGVGFDRKRGSS XXXXXXXXXXX LVAAMDT YVVVPPVESLS+WLFSF AVPWLLLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDGGGGVVGNRTAASRTALT ELARGLMRIYCRHRFLWPFSRFC
Sbjct: 1 MERVQAKVVRSDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDASSTLTQQXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXRVGDEDDDQGKDLEPGQGARRKLTWSENGERGRSSSSLTV---------------------------------------------------------------GEQQQSAAEGVGGKEEADGGAFAVEGNXXXXXXXXXXXGDAGLTVSDEYESEVDVLGVEGSPVTAVSLGATTGGGKMPSKGEDFKVALTALGEGWLLGDSGNAAGEGNQAERPKGKGAAVRVSTEIPCQLQDFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDAIRKRKPAMPVRTVTSGGDESDDEDRIRATREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVESRPRAKSATAAAPTMAAVPPRAPAQDAAPLRKRGYSGVGFDRKRGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAAMDTAEYVVVPPVESLSNWLFSFAAVPWLLLALVLVAEVIAYSRFSSETAGFLEAAEAALVVLGGSRAEDGDGGGGVVGNRTAASRTALTAELARGLMRIYCRHRFLWPFSRFC 771
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: A0A8J2ST97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST97_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.260e-46 Identity = 159/544 (29.23%), Postives = 221/544 (40.62%), Query Frame = 1 Query: 163 ADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDASSTLTQQQXXXXXXXESSLMLERXXXXXXXXXXXXXXXXXXXXXXXXXXGRHTSSSSRVGDEDDDQGKDPGQGARRKLTWSENGERGRSSSSLTVEXXXXXXXXXXXXGEDHCLSVSGPSSNDASNSSFSLPAAAAVDTPHAVAVALEPLEASPNGGVGEQQQSAAEGVGGKEEADGGAFAVEGNGRGGKGEGEDGGDAGLTVSDEYESEVDVLGV-EGSPVTAVSLGATTGGGKVPSKGEDFKVALAALGEGWLVGDSGNAAGEGNQAERPKGKGAAVRVSTEIPCQLQDFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISAPIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQPGQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESF 1791
A +R++IVR+IFG+VG DFSCA+E +ILLHGR+YVT F+CFYSNLFGFEK IKIP+ H+ C+TKE TA+FIPNAIA+IT++KEY+FRSFWDR+D F L+ + + L +SS V +E+ Q S E E H V+TP A +L QQ + + G AG V E S DV E + TA + GA K+ A + ++P + +FF F+++ + FH GD +V TPW + G RE+RF ++ P+GP S R K+QRCR + HGL+L +EDI D F I DR VV P DG V V E E+K+ KST+F++ IE+ S S+ + ++++
Sbjct: 43 AAWRDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHVTCVTKENTAVFIPNAIAVITARKEYVFRSFWDRDDCFNLLRAYHEMYRTVLE------------------------------------------------PASSHVEEEETQQ----------------------QESKEEAEKF-----------ETH------------------------VETPVARQESLP-------------QQDLLKRIEGI--------------------------AGPDVQ-ERPSTPDVADTPEHARSTAKAFGAEVHATKL----------------------------------------AETLHTCQLPVSVDEFFAHFLADGCGFPLTKFHVDQGDLEVACTPWASSDGEHD--RELRFRRLLNNPMGPKSARTTKIQRCRAFGRHGLVLHGVLSMEDIPYRDCFAIHDRWVVTPRDDG-VDVAFEFEVKWSKSTIFKRKIESSSRSDLQAYYDAY 398
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: A0A7S2STC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STC3_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.120e-39 Identity = 73/108 (67.59%), Postives = 93/108 (86.11%), Query Frame = 1 Query: 169 YREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDA 492
+R +IVR+IFG+VG +DFSCAVE +ILLHGRMYVT+ F+CFYSNLFGFEK IKIP+ H+ C+TKE TA+FIPNAIA+IT+K+EY FRSFWDR++AF LK+C + +
Sbjct: 26 WRNEIVRTIFGDVGTIKKDFSCAVERKILLHGRMYVTDKFICFYSNLFGFEKKIKIPYSHIACVTKEYTAVFIPNAIAVITAKREYFFRSFWDRDEAFHLLKECHEQS 133
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: A0A7S3NLX8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLX8_9STRA) HSP 1 Score: 159 bits (401), Expect = 9.390e-37 Identity = 76/125 (60.80%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 106 TPSIMERVQAKVVRSDSATAD-YREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQ 477
T S +E+ A + A+ YR++IVR+IFG+VG DFSCA+E +ILLHGR+YVT F+CFYSNLFGFEK IKIP+ ++ CITKE TA+FIPNAIA+IT++KEYIFRSFWDR++ + LKQ
Sbjct: 127 TNSSLEKATADFLWGTEEEANPYRDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSYITCITKEYTAVFIPNAIAVITARKEYIFRSFWDRDECYDVLKQ 251
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: F0Y4G3_AURAN (GRAM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4G3_AURAN) HSP 1 Score: 139 bits (349), Expect = 2.400e-35 Identity = 61/83 (73.49%), Postives = 73/83 (87.95%), Query Frame = 1 Query: 223 DFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTL 471
DFSCA+E +ILLHGR+YVT F+CFYSNLFGFEK IKIP+ H+ CITKE TA+FIPNAIA+IT++KEY+FRSFWDR+D F L
Sbjct: 2 DFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHITCITKEYTAVFIPNAIAVITARKEYVFRSFWDRDDCFDLL 84
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: A0A7S1U683_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U683_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.570e-29 Identity = 53/118 (44.92%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 127 VQAKVVRSDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQC 480
+ A + ++ YR ++V+ IFG G + DFSC+VES++ LHG MYVT F+CFYSN FG+EK I +P+ + CI+K ++F+ + I T+K+ Y+FR+FWDRE+A+K L+ C
Sbjct: 11 LDAAAITKEAQEEAYRREVVKLIFGNAGLILSDFSCSVESKMTLHGHMYVTTRFICFYSNFFGYEKKILLPYKTINCISKTSDSVFLSPGVEISTAKQGYVFRNFWDREEAYKILRDC 128
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: W7TDU9_9STRA (Gram domain-containing protein 1a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDU9_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.830e-29 Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 169 YREDIVRSIFGE-VGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQC 480
+R++IVR IFGE +G +D SCAVES+ILLHGR+Y+T+ FVCFYSN FGFEK IKIPF +R ++K TAL IPN I I T KEY FRSFWDR++ F + +C
Sbjct: 100 FRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARC 204
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: A0A836CDE2_9STRA (GRAM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE2_9STRA) HSP 1 Score: 117 bits (293), Expect = 7.220e-28 Identity = 51/77 (66.23%), Postives = 66/77 (85.71%), Query Frame = 1 Query: 220 EDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDR 450
+DFSCAV+SR+L+HGR+Y+T + FYSN+FGFEKII+IPF H+R + + TALFIPNAIAI TS++ Y+FRSFWDR
Sbjct: 1 QDFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPFTHVRGVARASTALFIPNAIAITTSRRAYVFRSFWDR 77
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Match: A0A4D9D7Z9_9STRA (VASt domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Z9_9STRA) HSP 1 Score: 126 bits (317), Expect = 5.830e-26 Identity = 156/548 (28.47%), Postives = 229/548 (41.79%), Query Frame = 1 Query: 295 FYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQCQQDASSTLTQQQXXXXXXXESSLMLERXXXXXXXXXXXXXXXXXXXXXXXXXXGRHTSSSSRVGDEDDDQGKDPGQGARRKLTWSENGERGRSSSSLTVEXXXXXXXXXXXXGEDHCLSVSGPSSNDASNSSFSLPAAAAVDTPHAVAVALEPLEASPNGGVGEQQQSAAEGVGG--------KEEADGGAFAVEGNGRGGKGEGEDGGDAGLTVSDEYESEVDVLGVEGSPVTAVSLGATT------GGGKVPSKGEDFKV-ALAALGEGWL----VGDSGNAAGEGNQAERPKGKGA--AVRVSTEIPCQLQDFFQLFISNDAEKGIPAFH--------QSMGDSDVKATPWKVAGGALGMTREIRFVHPISA-PIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQP--------GQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDAIRKR 1824
FYSN FGFEK IKIPF +R ++K TAL IPN I I T KEY FRSFWDR++ F + +C + L+R GR +S++ V ++ G P G R T S XX E+H + + D S LP P A E GG G Q + E VGG +E G + G G D L + + G + V GAT+ GGG GED + L L E D G A G QA K +G A+R +T +Q+FF+ FIS+ A GI +H Q GD +V+ +PW+ +G TR +RFV + P+GP + ++LQR R++ +HG++LETS+ +E++ D F ++DR VV+P + A+ ++ E++F KST+F+K IE++S ++T + + M + + +R
Sbjct: 515 FYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARC----FRAYHRMPSVPREAVMECRSLDRT-------------------------GRMENSTTTVVED----GGGPMAGTGRPQTASSVSASYSQXXXXXXXXXQFGHRKEPQKQEEHREA----GAEDRRGSHPPLPPEPRSQGPSQQVSAATHGE----GGTGPQYGISGEPVGGDFLPAREPSDETGGVPQHPDTPGPGPTLAAPSSPDLALPPPLDVHTVDAYEGADEGERRDVFRGATSPSPLAPGGGISLGSGEDDGMWDLDELNESTQNVTSERDLGAAFGRAMQAHPLKERGLEFALRKTT-----VQEFFRDFISDKAVLGIDKYHGKGVLIWSQWQGDKEVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR 1016 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.720.1 >prot_Ecto-sp6_S_contig100.720.1 ID=prot_Ecto-sp6_S_contig100.720.1|Name=mRNA_Ecto-sp6_S_contig100.720.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=864bp MASAPASPRAAADGEQRDLSPRGSPAGSDWSSGRLTPSIMERVQAKVVRSback to top mRNA from alignment at Ecto-sp6_S_contig100:273642..283423+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.720.1 ID=mRNA_Ecto-sp6_S_contig100.720.1|Name=mRNA_Ecto-sp6_S_contig100.720.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9782bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:273642..283423+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:273642..283423+ >mRNA_Ecto-sp6_S_contig100.720.1 ID=mRNA_Ecto-sp6_S_contig100.720.1|Name=mRNA_Ecto-sp6_S_contig100.720.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2592bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:273642..283423+ (Ectocarpus species6 EcLAC_371)back to top |