Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 273 |
| Hectar predicted targeting category | signal anchor |
| Exons | 2 |
| Cds size | 273 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348722.087675-CDS-Ecto-sp6_S_contig100:180537..180713 | 1682348722.087675-CDS-Ecto-sp6_S_contig100:180537..180713 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig100 180538..180713 - |
| 1682348722.0969462-CDS-Ecto-sp6_S_contig100:182301..182398 | 1682348722.0969462-CDS-Ecto-sp6_S_contig100:182301..182398 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig100 182302..182398 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.706.1 >prot_Ecto-sp6_S_contig100.706.1 ID=prot_Ecto-sp6_S_contig100.706.1|Name=mRNA_Ecto-sp6_S_contig100.706.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=91bp
YSKTVARGLTERWKAELGDRERLARTPRLRGAAERWSPRRDPGRAFLTGC
SRVWLFYWYKLPRIVSALYACTFTQTMCGVCGVCVSLLLG* back to topmRNA from alignment at Ecto-sp6_S_contig100:180538..182398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig100.706.1 ID=mRNA_Ecto-sp6_S_contig100.706.1|Name=mRNA_Ecto-sp6_S_contig100.706.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1861bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:180538..182398- (Ectocarpus species6 EcLAC_371)
TACAGTAAGACCGTGGCCAGAGGGTTGACGGAGAGGTGGAAAGCTGAGCT
AGGGGACCGAGAACGACTGGCAAGAACGCCAAGGCTGCGTGGAGCAGGTA
TGTGGCTACTGATATTTCCCATTGTCTTTGCGTGCAAGGGTGTTGGGCAC
TAACTCTGGGGCATCGCCGAAGTGGCCTTGGATGCTTGGATGGCCTTGGA
AATCACGCCGCAGCGCGAGTCTCGCCGCGCACCATGCGGTGTTCATGGAC
AGCGCTCCTTGTCTCTGCCTCTCTACGAGAAGGAGAGTTCCGCAGGATAC
GCATACGTTCACGCTTGATTGTGATAGTTGGCACTGATAATTGTGGGTGG
GTTCGCATATTCGGGAGCACACCACCTGCTTGTTCGTGTGTTGTGCGCTG
CTGCCGTGTATCATGTGTCGTGGTACGCGCGACAAGTTGGCCCAGAGAGC
ACACCACTCAAAGTTTACGCACATCAGCAACACTTACAGCTTAGGGAAAG
GCCTCCCGGTCAAGTGTTTTGTGTGCACGTAGAAAAGAAGGATCCCTCTC
GCCGGTTTCGCAGAGTTGTCTGCGTTCTACGTAGGCCTTGTTGCACATGT
ACGCCATGTCATGTGATGTTGCAGGTTGGAAACACTCCGCAAGCCGCTGC
TGTCTTGCCGGTTACCGTAGGTGACACAGATACCACACCCCTGAATCTGT
TTTCAGAGCTCGATTTCTCCACGATAAAACGACGGCAAGGCCGAAAACGG
CGGCGTTGAAGCCGCCTGGCCAAGAGATTTTTGAGAACGTGTGTTTGATT
TCTGCGTCCTCTTCGTCGTGGAGTGATTGAGCTTTGACAATCGGTCCAGG
GGGTGTGGTATCTTGTGTCACCTACGGTAGGATTAGGCCCGAAGAGTGCC
GCCGTGCGCCCGTACCCTGTAGTGTACGGTACATATTACTTTCGCCTGTT
GGGCGTGCTGTGTGTGCGTAACTGCTTCGTGCTCTGAATATGGCCGCAGG
CTCAAATATGTAACATGTGCGGGAGGATCCCGTTAACCGCTGTGGTAAAA
GTAGAAAATAGCACGCGTTGCAGCTGTAGCGCAAGACACCACACCCCCTT
GAACGAATAATTGTAGCAGCCAACCGAACATCTTGCACGTGCGATGCCGA
TGGTAGCAGTAAAGGGTGAATCGAAACCCTTCGCAAAGAAACGTCCTTGC
TTTCTACTTGTAGGTTCAAGTTGTACTCCTTCCCCTACGGCCTAGACACA
AACAACGTGCGTTGGGTAGAGGACGATGACCATGGTAGTTAAGTAAACAC
CAACAGTACTTGGATCGGAATAGTCATGAGGGGATCCATGAGTCTCTTAT
CCCAGCGCAAAGCTCGTTCCGTGATATCGCCCCTCCCGAACCCAACAGAC
AAATTGGTTCATTGCATAAACACGTTGAGGACGCAGTTTATCTTTGATGC
CCTTGTACCTTTTGTCCGTCCCGGAGCTTCATTTTCCCCTGCAAAGTTCG
TTCACCCCCCGGGGCATTCGCAAAGGCAAACTGAGGTTTTCATTGGGTCT
CTCTCTGGTGACATTCAACCGGCGAACTTCAACTTTGTTTTATCTGTTGT
TTTTTCCCCCATAAAAACAGCTAACTCGAAGACTTCGTTCTCTCCCCGAC
GCAATATGTATCTCGTTCCAATGTCCTTGTCACAGCTGAACGGTGGAGTC
CACGTCGTGACCCAGGGAGGGCTTTCTTAACGGGGTGCAGCCGCGTTTGG
CTGTTCTACTGGTACAAGTTACCACGAATTGTTTCGGCCTTGTACGCCTG
CACCTTCACACAAACCATGTGCGGCGTGTGTGGTGTGTGTGTTTCATTGT
TGTTGGGTTGA back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig100:180538..182398- >mRNA_Ecto-sp6_S_contig100.706.1 ID=mRNA_Ecto-sp6_S_contig100.706.1|Name=mRNA_Ecto-sp6_S_contig100.706.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=273bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:180538..182398- (Ectocarpus species6 EcLAC_371)
TACAGTAAGACCGTGGCCAGAGGGTTGACGGAGAGGTGGAAAGCTGAGCT
AGGGGACCGAGAACGACTGGCAAGAACGCCAAGGCTGCGTGGAGCAGCTG
AACGGTGGAGTCCACGTCGTGACCCAGGGAGGGCTTTCTTAACGGGGTGC
AGCCGCGTTTGGCTGTTCTACTGGTACAAGTTACCACGAATTGTTTCGGC
CTTGTACGCCTGCACCTTCACACAAACCATGTGCGGCGTGTGTGGTGTGT
GTGTTTCATTGTTGTTGGGTTGA back to top
|