Homology
BLAST of mRNA_Ecto-sp6_S_contig100.689.1 vs. uniprot
Match:
D7FKI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI3_ECTSI)
HSP 1 Score: 333 bits (855), Expect = 1.460e-114
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 1
Query: 40 MTPPTPPVQLTGHAARAVISTERRVQIWDQFYISFKETIPPNQWCTRQELVTAACSGTTGVKFTVDELTEVIRGRKHKREAGIDSQKVDGEWLYSPAAKTPPGPGXXXXXXXXXXXXXXXXXXXXXKRASPSGGVDPMTTRLRSGAKKARPSPRARSGNSDRNGQKGGGAGLGGGLFRFGGGGVGAADEEGG-WSCAVM 633
MTPPTPPVQLTGHAARAVISTERRVQIWDQFYISFKETIPPNQWCTRQELVTAACSGTTGVKFTVDELTEVIRGRKHKREAGIDSQKVDGEWLYSPAAKTPPGPGXXXXXXXXXXXXXXXXXXX KRASPSGGVDPMTTRLRSGAKKARPSPRARSGNSDRNGQKGGGAGLGGGLFRFGGGGVGAADEEGG WSCAVM
Sbjct: 1 MTPPTPPVQLTGHAARAVISTERRVQIWDQFYISFKETIPPNQWCTRQELVTAACSGTTGVKFTVDELTEVIRGRKHKREAGIDSQKVDGEWLYSPAAKTPPGPGXXXXXXXXXXXXXXXXXXX--KRASPSGGVDPMTTRLRSGAKKARPSPRARSGNSDRNGQKGGGAGLGGGLFRFGGGGVGAADEEGGGWSCAVM 197
BLAST of mRNA_Ecto-sp6_S_contig100.689.1 vs. uniprot
Match:
A0A6H5KU79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU79_9PHAE)
HSP 1 Score: 104 bits (259), Expect = 6.280e-26
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 1
Query: 451 MTTRLRSGAKKARPSPRARSGNSDRNGQKGGGAGLGGGLFRFGGGGVGAADEEGG-WSCAVM 633
MTTRLRSGAKKARPS RARSGNSDRNGQKGGG+GLGGGLFRFGGGGVGAADEEGG WSCAVM
Sbjct: 1 MTTRLRSGAKKARPSSRARSGNSDRNGQKGGGSGLGGGLFRFGGGGVGAADEEGGGWSCAVM 62
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.689.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.46e-114 / Id = 98.49 Expect = 6.28e-26 / Id = 95.16 Sequence D7FKI3_ECTSI A0A6H5KU79_9PHAE
Match Name E-value Identity Description
D7FKI3_ECTSI 1.460e-114 98.49 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5KU79_9PHAE 6.280e-26 95.16 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Model size 637 Hectar predicted targeting category other localisation Exons 3 Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-12_001960.2 Cds size 636
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348720.5365195-CDS-Ecto-sp6_S_contig100:71102..71415 1682348720.5365195-CDS-Ecto-sp6_S_contig100:71102..71415 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 71103..71415 - 1682348720.5468752-CDS-Ecto-sp6_S_contig100:72601..72858 1682348720.5468752-CDS-Ecto-sp6_S_contig100:72601..72858 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 72602..72858 - 1682348720.5556622-CDS-Ecto-sp6_S_contig100:73486..73552 1682348720.5556622-CDS-Ecto-sp6_S_contig100:73486..73552 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 73487..73552 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.689.1
>prot_Ecto-sp6_S_contig100.689.1 ID=prot_Ecto-sp6_S_contig100.689.1|Name=mRNA_Ecto-sp6_S_contig100.689.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=212bp
CADVFHVTSRCWRMTPPTPPVQLTGHAARAVISTERRVQIWDQFYISFKE back to top mRNA from alignment at Ecto-sp6_S_contig100:71103..73552-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.689.1 ID=mRNA_Ecto-sp6_S_contig100.689.1|Name=mRNA_Ecto-sp6_S_contig100.689.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2450bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:71103..73552- (Ectocarpus species6 EcLAC_371)TGCGCAGACGTGTTCCACGTGACTTCGAGGTGCTGGAGAATGACGCCGCC
AACTCCTCCAGTCCAG GTGATGAGGAGAAGGGCCGGAAGCCTCCATGCTT
GGCGACCTGACTCTCTGTCTGCCCAGAATATTGTGTGGGGTTGGTGTTTG
GGGACAAGGCAGGATCGCACTGAAGATCCACTGCTCCCTGGCTTTTGGCG
CCATCCCGCCCGACAGCTTGGTTGAGCGAGGCGCGCGTCGTTCGCCCTAT
GCGCTCACCAGCAGATCCAGGGATAGTTGGCGCCTTGGGGTGTTGTCGTC
AAACTTCGGCAGTTTTTTCAAAATCCCCCCGCCTTTTTTTTTTCAGACAC
GACGTTGCAGGGAGGTCACGCACGAAACGCGGGGTGGTTGGCCGCCGACT
GCCGGTGCGCCTCTATTTGCCGATGCCACCGAACGCCGACCGTCACACAC
AAAGACCGGGGGGTGTTGGGATCGACTCTTTTGGCCGATCGGATACCCCA
TGTTTGTTTCTGTAAAACGGTCGTCAAATACGACAACTACCACCCTGTCC
CACGGGACCCCGACCTTTTTCCGGCGGGCGAATCGCATCGTTTGGAGCCG
TCGACAGTCCGCTTAAGCAGGCGGGGCGACATGATTAGACTAACGATCAT
CTTACTTTTCCCCTCTCCCCTCTTTTGCGCCGCCGTTTGCGAAGCTAACC
GGGCATGCCGCGCGAGCCGTTATCTCGACGGAGCGAAGGGTCCAGATATG
GGACCAGTTCTACATCAGCTTCAAGGAGACCATTCCGCCCAACCAGTGGT
GCACGAGACAGGAGCTGGTCACGGCGGCGTGCAGCGGCACAACCGGGGTC
AAGTTTACGGTCGACGAGCTGACCGAGGTCATCAGAGGGCGGAAACACAA
GAGGGAAGCCGGCATCGACAGCCAAAAGGTCGACGGGGAATGGCTCTACA
G GTGTGTGGGGGGAGTGGGGAGGGTTCTGCTGATGTTTTTGCTTACACCC
AGGGATCTTGGAAGATCTGGAATTATTACTCTCGCACAGCTGCTCTACGA
CTCTGCTCCTCACAATGCCATCTACGATAACTTCACCACTGTTGGTGCGG
TTTCCAGCGCTCCCCCGTAAGCGAGCGTGGTCATAATCTGCTGTGTTGTT
GCCGAATACATTATTTGGTTACATGTTCCAGTTCGCCGCGAAGAAAAGGT
AACGATTGTGACTGCCGTCCTGCATGCATACATGCGCTGCGTGACACCCG
CAGGATTTTGCCCAGTGCCCGCGACGTACTTCGCACTCAAAGCGCTTATC
CCAGTCCACCGTACCACCTTTGGATCGAACGCCGACTATGGTACCCATCA
CGTTCCATCCGGCTCTGTGCTGTCGGTGCTCTTACACCCTGTCGGGGTGG
CTTTCCGGACTAAGAATCAGAATTATTTAGACAAAGTTCCAAATTTACCA
CGGACCACGGACAGCAGTAGTCTCCATGTGCTCACTTGAGTGTCATGCAT
GACTCTACCCGGGTTGGCGAGGAGACGTTCCTCTCTTGCAAACTCGCTCT
TTTTTATCACTCGCGCTTAAAAAACAGATTTGGAGGTCGCCCTGCGGTGT
TCTTAATGACACTGCTGTTGCGTTACACAAACGTTTCGTCGAAACAGCCA
ATCAATTCACAGCAAACGCACAGAATGACAAGAGCGGCGATTTCGAGCCC
ATTTTATCCTCGTTTGAGCTATAATAGCAACCTTTTCAACAACCCGCCAG
ATCAGTTATTTGTCCTTTCGCGCTCTCGTGTTGTGTCTGAAAAGACCACA
TAAATCTCACGCCGGAACTCAAGCACTACTAAACGTTGCATGTCTTATTT
TCGATGAGGAGTTGGGAAGCCACCCTCCCCGTCTCCGGCAGCTGTCGTGG
CCGCCAGCCTTGCCAAGCTTGGCAACAACCGAATCCGCTCTTCCCACGAT
CAGCGTCCCGACGAGTACCCCCCCCACCTCGAAGGTTCGTCCCGTCGGCG
GTCAATCCGTCTTCCACGTCTCCTCCACCTCCGCCGCCGGCGGCCAAGCG
CCCCGCCCCTTCGTCGACCGTCAAGCCCAAGCTCAAGCCCAAGACCACAC
CGAAGCGCAACGGGCCCTTGCGGCCCCGCGCTAAGAGCCCGGCGGCGAAG
ACCCCGCCGGGGCCGGGAGCGGCGGCGGCGGCGGCGGCGGCATCTGCGGC
GGCGGGGGGGTCGGCGGCGTCGGCGTCCCGCAAGCGCGCCTCTCCCTCGG
GAGGAGTGGATCCCATGACCACGCGCCTTCGATCGGGAGCTAAGAAGGCT
CGCCCGTCCCCTAGGGCCCGCAGCGGGAACTCCGACAGGAACGGCCAGAA
GGGCGGCGGCGCGGGGTTGGGGGGCGGTTTGTTCAGATTCGGAGGCGGCG
GAGTCGGGGCGGCGGACGAGGAGGGCGGCTGGAGCTGCGCGGTGATGTAA
back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:71103..73552-
>mRNA_Ecto-sp6_S_contig100.689.1 ID=mRNA_Ecto-sp6_S_contig100.689.1|Name=mRNA_Ecto-sp6_S_contig100.689.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:71103..73552- (Ectocarpus species6 EcLAC_371) back to top