mRNA_Ecto-sp6_S_contig10.574.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: D7FN97_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN97_ECTSI) HSP 1 Score: 376 bits (965), Expect = 2.430e-131 Identity = 195/204 (95.59%), Postives = 199/204 (97.55%), Query Frame = 1 Query: 1 MSFISLLFPYIPWTKHGRRKVAVEASYTLRSQSASSAGGTVLDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVENTTRRSVM 612 MSFIS LFPYIPWTKH R KVAVEASYTLRSQSASSAGGTVLDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKF+TAG DPESAAVAVN+CE NPNFEQFAAIVDKYIREGSPFEVNIESKIRN+ILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVENTTRRSV+ Sbjct: 1 MSFISSLFPYIPWTKHERSKVAVEASYTLRSQSASSAGGTVLDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFSTAGKDPESAAVAVNECEHNPNFEQFAAIVDKYIREGSPFEVNIESKIRNEILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVENTTRRSVV 204
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: A0A6H5JLE7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE7_9PHAE) HSP 1 Score: 308 bits (790), Expect = 3.070e-103 Identity = 165/204 (80.88%), Postives = 178/204 (87.25%), Query Frame = 1 Query: 1 MSFISLLFPYIPWTKHGRRKVAVEASYTLRSQSASSAGGTVLDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVENTTRRSVM 612 + FISLLFPYIPWTKHG RKVAVEASYTLRSQ+ASSAGGTVLDLIIQFPPLFQA + ESLMFLVDADEFN +LHAVSKFT+AG DP AA+ V +CE+N NFEQFAAIVDKYIREGSPFEVNIESKIR++ILREVDRASF RL LD+K HLL+KATKQVSNMLRENLY KFRETEQFKQIQEQLFSVE RRSV+ Sbjct: 98 VGFISLLFPYIPWTKHGSRKVAVEASYTLRSQAASSAGGTVLDLIIQFPPLFQACLSPVSDCAFVESLMFLVDADEFNCSLHAVSKFTSAGADPSPAAMGVVECEENLNFEQFAAIVDKYIREGSPFEVNIESKIRDEILREVDRASFRRLTLDEKVHLLDKATKQVSNMLRENLYLKFRETEQFKQIQEQLFSVEQAARRSVV 301
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI) HSP 1 Score: 142 bits (358), Expect = 8.190e-37 Identity = 84/193 (43.52%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 19 LFPYIPWTKHGRRKVAVEASYTLRSQSASSAGGTV-----LDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFS 582 LFPY+PW KHG A + + S + TV ++ I++ P L +AFEE+CR ALCSES++FL A FN +++A +TA D NF F I DKYI++GSPFE+NIESK ++ I++ D+ +F++L LDD L+ A K+V ML+ENLY KFR+T+QFKQI LFS Sbjct: 258 LFPYVPWRKHGGTVAIDSAECMVLAASTHCSKSTVKLDDAMEEILRCPVLLEAFEEFCRKALCSESILFLKAAWAFNDSVYA----STANEDT--------------NFALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQLRLDDAARGLDAAAKEVGKMLKENLYDKFRQTDQFKQITGVLFS 432
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.250e-34 Identity = 84/199 (42.21%), Postives = 120/199 (60.30%), Query Frame = 1 Query: 10 ISLLFPYIPWT-KHGRRKVAVEASYTLRSQSASSAGGTV-----LDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVE 588 I+ LFPY+PWT + G + V + ++ +SS +V L+ I++FPPL +AF E+CR ALCSESLMFL +F+ +L A + + + F +F IVD+YIR+GS FEVNIESK + IL +SF+ L LDD +L+ A K++ ML+ENLY+KFR TEQFK+I++ L+S E Sbjct: 309 IASLFPYVPWTTRSGAVAIDVMNESKVFTKPSSSKFTSVKLDDKLEEILRFPPLLEAFGEFCRKALCSESLMFLTAGKDFHESLDA------------------SDADYDTIFARFNEIVDQYIRDGSSFEVNIESKTKAQILSRTSMSSFKELPLDDAVCILDLAVKEIGKMLQENLYNKFRSTEQFKEIKDMLYSAE 489
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI) HSP 1 Score: 118 bits (295), Expect = 2.600e-27 Identity = 66/193 (34.20%), Postives = 109/193 (56.48%), Query Frame = 1 Query: 22 FPYIPWTKHGRRKVAVEASYTLRSQSASSAGGTV----LDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVE 588 FPY+PW + KVAV + T+ S T+ L+ II PPL +AF+ +C+ ALC ES++ L + F +++AV + +D+ F++F AIV+K+I+ GS +EVNI+ + R ++R+VD A F+ L+ D + + A Q S ML +NL KF+ TE++++I E L +++ Sbjct: 350 FPYVPWRRSASGKVAVGMNETMHVTCTSRPLSTIQLGRLETIINTPPLLEAFDSFCQKALCGESILLLREVAAFRDSIYAV------------------EADDDALFKEFVAIVNKFIKSGSSYEVNIDCRARTGVMRDVDEARFKELDTDGRADIFTLAETQTSQMLADNLLAKFQATERYQRIAEGLLAID 524
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: A0A6H5K6R2_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R2_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 9.620e-20 Identity = 60/156 (38.46%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 10 ISLLFPYIPWTKHGRRKVAVEA---SYTLRSQSASSAGGTV-----LDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERL 453 I+ L PYIPW + VAV+A +T R S + +V L+ I+ F PL +AFEE+C+ ALC ESLMFL F ++HA + D+ NF IV KY++ GSPFEVNI+SK +++IL ++ R +F RL Sbjct: 31 IASLLPYIPW-REDASIVAVDAVGRRFTSRGVSLGNINRSVKLDDALEQILCFTPLLEAFEEFCQKALCIESLMFLKAVMGFRGSVHA------------------STASDDGNFTLLTDIVQKYVQSGSPFEVNIDSKTKSNILVKITRETFMRL 167
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: D7G3E2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E2_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 1.120e-11 Identity = 45/142 (31.69%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 133 IIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFK 558 I+ + PL +AF E+C+ +LC ES FL DA EF + + G+ SA AA+V++YI++G+P E+NI S I++DI+ +F L+ D + + KA +++ +L +NL +F + Q+K Sbjct: 47 IMNYLPLREAFGEFCQKSLCGESFQFLRDASEFRG---VIVEGPVDGDANGSAEEEQEAPVHTSGLGDVAAMVNEYIKDGAPSEINIGSDIKHDIMELAKVETFASLDQDARLLIFVKAEREIRRILEDNLMARFLASAQYK 185
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: A0A6H5J8W8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8W8_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.190e-11 Identity = 44/142 (30.99%), Postives = 77/142 (54.23%), Query Frame = 1 Query: 133 IIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFK 558 I+ + PL +AF E+C+ +LCSES FL+DA EF + D +A N+ A +V++YI++G+P E+NI S ++DI+ +F L+ D ++ + KA +++ +L +NL +F + Q+K Sbjct: 197 IMNYLPLREAFGEFCQKSLCSESFQFLLDASEFRGVIVE----GPVDGDANGSAEEENEAPTR-RLGDVATMVNEYIKDGAPSEINIGSDTKHDIMELAKAEAFASLDQDARKLIFVKAEREIKRILEDNLMARFLVSAQYK 333
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: A0A6H5JIZ3_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ3_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 3.520e-10 Identity = 43/143 (30.07%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 133 IIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPN-FEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFK 558 I+ + PL +AF E+C+ +LCSES FL+DA EF + D +A N+ + + A +V++YI++G+P E+NI S + DI+ +F L+ D + + +A +++ +L +NL +F + Q+K Sbjct: 298 IMNYLPLREAFGEFCQKSLCSESFQFLLDASEFRGVIVE----GPVDGDANGSAEEENEAPTHTSGLGDVATMVNEYIKDGAPSEINIGSDTKRDIMELAKVEAFASLDQDARLLIFVQAEREIRRILEDNLMARFLASAQYK 436
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Match: D7G0P5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P5_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 4.710e-9 Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 1 Query: 133 IIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFTTAGNDPESAAVAVNKCEDNPNFEQFAAIVDKYIREGSPFEVNIESKIRNDILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFK 558 I+ + PL +AF E+C+ + CSE FL+DA EF + A E A + AA+V++YI++G+P E+NI S ++DI+ +F L+ D + + KA +++ +L +NL +F + Q+K Sbjct: 151 IMNYLPLREAFGEFCQKSFCSE---FLLDASEFRGVIVEGPVEGDANGSAEEENEAPTRTS---GLGDVAAMVNEYIKDGAPSEINIGSDTKHDIMELAKVEAFTSLDQDARRLIFGKAEREIRRILEDNLMARFLASAQYK 286 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.574.1 >prot_Ecto-sp6_S_contig10.574.1 ID=prot_Ecto-sp6_S_contig10.574.1|Name=mRNA_Ecto-sp6_S_contig10.574.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=205bp MSFISLLFPYIPWTKHGRRKVAVEASYTLRSQSASSAGGTVLDLIIQFPPback to top mRNA from alignment at Ecto-sp6_S_contig10:1607855..1609847- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.574.1 ID=mRNA_Ecto-sp6_S_contig10.574.1|Name=mRNA_Ecto-sp6_S_contig10.574.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1993bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1607855..1609847- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1607855..1609847- >mRNA_Ecto-sp6_S_contig10.574.1 ID=mRNA_Ecto-sp6_S_contig10.574.1|Name=mRNA_Ecto-sp6_S_contig10.574.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=615bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1607855..1609847- (Ectocarpus species6 EcLAC_371)back to top |