mRNA_Ecto-sp6_S_contig10.560.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A6H5J668_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J668_9PHAE) HSP 1 Score: 537 bits (1384), Expect = 8.460e-186 Identity = 383/412 (92.96%), Postives = 385/412 (93.45%), Query Frame = 1
Query: 127 MMLSVLEHLASAEGDLPSESRTYVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEISTRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAGGLAGMLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG 1362
MMLSVLEHLASAEGDLPSESRT+VASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASG XXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA GDADEI+TRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXAPAGGLAGMLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG
Sbjct: 1 MMLSVLEHLASAEGDLPSESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGGASFRXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGARGDADEIATRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXXGLASMIQNLAGVGXXXXXXXXXXAPAGGLAGMLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG 412
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: I2CPK1_NANGC (Conserved tpr domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPK1_NANGC) HSP 1 Score: 180 bits (457), Expect = 2.500e-49 Identity = 105/268 (39.18%), Postives = 150/268 (55.97%), Query Frame = 1
Query: 202 SAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 1005
SA+++L S G+ + S KP TL IF AG AL ++ G ++A L++ F Q++ ++ KG+FK VEEGS+ Y +R K AKFK + E S AD+ +A+ +KGEGN + AKDYE A+ YT+A+ L P+G +SH+Y NRAAA +LG + AV D Q+AI+LNPSY+KAY+RLGYA+F L+ Y A AY K+L+++P NAAN + L +A AK+
Sbjct: 32 SALATLRSTLGVDPAQGSDIAAYSYKPATLSQIFTAGVQALKLQTVGVEMAALKADPLFQQYLGKITEKGFFKDVEEGSKAYIDRFMKAAAKFKEKQEQVSSATP-------------------------------------SPADQARADALKGEGNAAISAKDYEKADICYTKAITLVPAGASSHLYYSNRAAARSHLGNHSGAVEDAQKAIELNPSYSKAYSRLGYAHFYLQQYSKAKDAYTKALDLDPANAANKEYLAKAEAKI 262
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A835ZH25_9STRA (SGTA_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH25_9STRA) HSP 1 Score: 172 bits (436), Expect = 9.790e-45 Identity = 140/316 (44.30%), Postives = 188/316 (59.49%), Query Frame = 1
Query: 106 MSVDTPTMMLSVLEHLASAEG--DLPSESRTYVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEISTRGA 1047
M+ D + +V+++L G D + + + +A ++L +AFG+ D Q +ELS +P TL+SIF AG A GA +A Q+ + + F +FV V+SAK EG+ YD +M K++A FK + XXXXXXXXXXXXXXXXXXXXXXXXX AKA EGN+ + + + AEA Y+ AL+LSP+GPNSH+Y CNRAAA C+L D AV DC +IDL+P+Y KAY RLGYAY+ +ED AY K++E+EP N AN +SL++A AKL A A RGA
Sbjct: 1 MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAA--EGTPEYDVQMNKIIATFKTK----------FGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKA-----------EGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGA 293
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A7S2FWT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWT3_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.380e-39 Identity = 95/265 (35.85%), Postives = 140/265 (52.83%), Query Frame = 1
Query: 217 LSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA 1011
L+ F ++ +D Q E +L+ TL + AG LGAKS ++L ELQ ++ F QF+ V +KG+F + G Y R ++V KFK R + A A +E+KAE+ K EGN+ L AK+Y+ A Y++A+++ P GP SH+Y NRA A YL ++ AV DC AI+ NP+YAKAYTRLG A L D+ +AV+ +KK++E+EP N ++ + L+ A K A
Sbjct: 41 LAENFSINTDDINQKEEYALESQTLLELLAAGKTQLGAKSYNEELEELQENKMFQQFLGSVKSKGFFNDTKPGEPEYKARYRRMVTKFKQRMNDSKANSKA--------------------------------AVAAGPTNEEKAEKFKVEGNETLKAKNYDAAVELYSKAIDVCPDGPKSHIYFANRAMARHYLKQHLGAVDDCNAAIERNPAYAKAYTRLGLAQQALNDWSSAVENHKKAVELEPSNKSSAQYLKTAQQKYAA 273
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A662X6P5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6P5_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.470e-33 Identity = 91/249 (36.55%), Postives = 127/249 (51.00%), Query Frame = 1
Query: 286 TLESIFRAGCAALGAKSAGQQLAE---------LQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 1005
+ E +F AG ALG ++ +AE L+ E + ++V + +KG+FKG GS + R K +AKFK + P +KA E KAEEVK GN L ++DY GA A Y EAL+LSP GP+SH+Y N AAAL YLG+ D + C+++I L PSY KAY+R+G A QL+DY+ AV ++++ LE++ NAA L A KL
Sbjct: 43 SFEEVFAAGLQALGLETGTAAVAEASVDEDPVVLKHPELWKKWVAKLESKGFFKGAAPGSSEHAARTTKALAKFKEK---------------------------------FGDVKPTAPVL-SKAEKEAKAEEVKARGNAALTSRDYAGAAALYREALQLSPDGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIALQPSYVKAYSRMGGAQVQLKDYDGAVDSFRRGLEVDSANAACRDGLADAERKL 257
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: K3WAR9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAR9_GLOUD) HSP 1 Score: 139 bits (351), Expect = 7.490e-33 Identity = 93/273 (34.07%), Postives = 140/273 (51.28%), Query Frame = 1
Query: 217 LSSAFGLSLEDPKQVRELSLKPH-TLESIFRAGCAALGAK--------SAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEK--KAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 1002
LS AF L++ D +Q R +L T E IF AG AL + S Q L++ + + +++ + K +F G+ GS+ + R+ K +AKFK + P + + +EK KAEE KG+GN L A DY+ A Y EAL+LSP+GPNSH+Y N AAAL YLG+ D+ + +++I L P+Y KAY+R+G+AY QL+D++ A+ A+++ LE++ NAA L A K
Sbjct: 40 LSEAFKLNVHDEQQKRTYALSGSATFEDIFAAGLKALNIEIGAASPLDSVDQDPVVLKNPDLWKKWIAKLEEKNFFNGLPAGSDEHTARLKKALAKFKEK---------------------------------FGDVKKPAPTAPSMSKEEKEAKAEEAKGKGNLALSAGDYKQAAVHYEEALKLSPAGPNSHIYHSNLAAALTYLGKYDEVIDHSEKSIALKPAYVKAYSRMGHAYVQLKDFDGAIDAFRRGLEVDSTNAACKDGLAEAERK 279
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: H3GML2_PHYRM (STI1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GML2_PHYRM) HSP 1 Score: 139 bits (349), Expect = 1.150e-32 Identity = 87/264 (32.95%), Postives = 137/264 (51.89%), Query Frame = 1
Query: 196 VASAISSLSSAFGLSLEDPKQVRELSLKPH-TLESIFRAGCAALGAKSAGQQLAE-----LQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAA 969
+ +A+S L+ AFG+ + D +Q R+L++ + IF AG AL ++ ++ + + E + ++V + AKG+FK G+ + R AK + KFK + ++ E KAEEVK +GN L +DYEGA Y EAL+LSP GP+SH+Y N AAAL YLG+ D + C+++I L P+Y KAY+RLG A QL+D++ A+ ++++ LE++ NAA
Sbjct: 30 IDTALSRLTEAFGVDVHDAEQRRQLAVDSDISFNEIFAAGLKALNLETGAKEAVDEDPVVKKHPELWKKWVAKLEAKGFFKDAAPGTSEHATRTAKALGKFKEKFGDVKPEL-------------------------------------SQEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSPEGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIVLKPAYVKAYSRLGSAQLQLQDFDGAIDSFRRGLEVDSSNAA 256
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: D0MS16_PHYIT (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=D0MS16_PHYIT) HSP 1 Score: 138 bits (347), Expect = 2.280e-32 Identity = 92/268 (34.33%), Postives = 138/268 (51.49%), Query Frame = 1
Query: 196 VASAISSLSSAFGLSLEDPKQVRELSLKPHT-LESIFRAGCAAL----GAKSAGQQLAE-----LQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAA 969
V +A++SL+ AFG+++ D +Q R+L++ T + IF AG AL GA + +A+ + E + +++ + +KG+FK GS Y R K +AKFK + K E KAEEVK +GN L +DYEGA Y EAL+LS GP+SH+Y N AAAL YLG++ + + C+ +I L PSY KAY+R+G A QL+D++ A+ Y++ LE++ NAA
Sbjct: 30 VDAALTSLTEAFGMNVHDAEQKRQLAVNGDTSFDEIFAAGLKALNLETGAPGETKSMADEDPVVKKHPELWKKWLAKLESKGFFKDAAPGSGEYATRTNKALAKFKEKFGDVKPDLY-------------------------------------KEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSSDGPSSHIYHSNLAAALMYLGKHTEVIDHCEHSIALQPSYVKAYSRMGSAQVQLQDFDGAIDTYRRGLEVDSTNAA 260
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A421GVH7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GVH7_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.800e-32 Identity = 98/290 (33.79%), Postives = 148/290 (51.03%), Query Frame = 1
Query: 133 LSVLEHLASAEGDLPSESRTYVASAISSLSSAFGLSLEDPKQVRELSLKPH-TLESIFRAGCAALGAK----------SAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAA 969
LS + L ++EG + SES V A+ LS AFG+S+ED +Q ++L++ + + IF AG L + S + + E + ++V + +KG+F G E GS Y +R AK +AKFK + T +K E KAEEVK EGN L +DYEGA Y EAL+LS GP+SH+Y N AAAL YLG+ + + +++I L P+Y KAY+R+G A QL D++ A+ ++++ LE++ +AA
Sbjct: 13 LSWINELKTSEG-VDSES---VDVAVQCLSKAFGVSVEDAEQAQQLAVNGSASFDEIFAAGLKVLKLEIGTDAEAKEASVDEDPVAQKHPELWKKWVAKLESKGFFAGAEVGSSEYTKRTAKALAKFKEK----------------------------------FGDVKPVAPTMSKEEKEAKAEEVKAEGNAALSRRDYEGAATLYREALQLSADGPSSHIYHSNLAAALMYLGQYTEVIDHSEQSIALKPAYVKAYSRMGNAQVQLNDFDGAIDSFRRGLEVDSTSAA 264
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A484E3R1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3R1_BRELC) HSP 1 Score: 134 bits (338), Expect = 7.070e-32 Identity = 93/279 (33.33%), Postives = 136/279 (48.75%), Query Frame = 1
Query: 196 VASAISSLSSAFGLSLEDPKQVRELSLKPHT-LESIFRAGCAALGAKS---------AGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 1002
V A+ L+ AFGLS+ DP+ R+L++ T + I AG AL + A + + E + ++V + +KG+FK GS Y R K ++KFK + + +K E KAEEVK +GN L ++DY+GA Y EAL+LSP+GP SH+Y N AAA Y+G+ + + C+++I L PSY KAYTRLG A QL+D++ A+ Y++ LEI+ N A L A K
Sbjct: 31 VDEALPRLAEAFGLSMHDPELKRQLAINSDTSFDDIVAAGLKALNLDTGTPSEVPSIAAEDPVVKKHPELWQKWVAKLESKGFFKDALPGSSEYTTRTNKALSKFKEKFGDVTPEL-------------------------------------SKEEKEVKAEEVKAQGNAALSSQDYDGAATLYREALQLSPNGPFSHIYHSNLAAAHMYMGKYTEVIDHCEQSIALKPSYMKAYTRLGSAQLQLQDFDGAIDTYRRGLEIDSTNDACRSGLAEAENK 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.560.1 >prot_Ecto-sp6_S_contig10.560.1 ID=prot_Ecto-sp6_S_contig10.560.1|Name=mRNA_Ecto-sp6_S_contig10.560.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=456bp MSVDTPTMMLSVLEHLASAEGDLPSESRTYVASAISSLSSAFGLSLEDPKback to top mRNA from alignment at Ecto-sp6_S_contig10:1473797..1477974+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.560.1 ID=mRNA_Ecto-sp6_S_contig10.560.1|Name=mRNA_Ecto-sp6_S_contig10.560.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4178bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1473797..1477974+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1473797..1477974+ >mRNA_Ecto-sp6_S_contig10.560.1 ID=mRNA_Ecto-sp6_S_contig10.560.1|Name=mRNA_Ecto-sp6_S_contig10.560.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1368bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1473797..1477974+ (Ectocarpus species6 EcLAC_371)back to top |