mRNA_Ecto-sp6_S_contig10.560.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.560.1
Unique NamemRNA_Ecto-sp6_S_contig10.560.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A6H5J668_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J668_9PHAE)

HSP 1 Score: 537 bits (1384), Expect = 8.460e-186
Identity = 383/412 (92.96%), Postives = 385/412 (93.45%), Query Frame = 1
Query:  127 MMLSVLEHLASAEGDLPSESRTYVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEISTRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAGGLAGMLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG 1362
            MMLSVLEHLASAEGDLPSESRT+VASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASG             XXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA GDADEI+TRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXAPAGGLAGMLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG
Sbjct:    1 MMLSVLEHLASAEGDLPSESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGGASFRXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGARGDADEIATRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXXGLASMIQNLAGVGXXXXXXXXXXAPAGGLAGMLNNPNMMAQAQQMXXXXXXXXXXXXXXXXXXXXQGLMGMMGG 412          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: I2CPK1_NANGC (Conserved tpr domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPK1_NANGC)

HSP 1 Score: 180 bits (457), Expect = 2.500e-49
Identity = 105/268 (39.18%), Postives = 150/268 (55.97%), Query Frame = 1
Query:  202 SAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 1005
            SA+++L S  G+       +   S KP TL  IF AG  AL  ++ G ++A L++   F Q++  ++ KG+FK VEEGS+ Y +R  K  AKFK + E  S                                           AD+ +A+ +KGEGN  + AKDYE A+  YT+A+ L P+G +SH+Y  NRAAA  +LG +  AV D Q+AI+LNPSY+KAY+RLGYA+F L+ Y  A  AY K+L+++P NAAN + L +A AK+
Sbjct:   32 SALATLRSTLGVDPAQGSDIAAYSYKPATLSQIFTAGVQALKLQTVGVEMAALKADPLFQQYLGKITEKGFFKDVEEGSKAYIDRFMKAAAKFKEKQEQVSSATP-------------------------------------SPADQARADALKGEGNAAISAKDYEKADICYTKAITLVPAGASSHLYYSNRAAARSHLGNHSGAVEDAQKAIELNPSYSKAYSRLGYAHFYLQQYSKAKDAYTKALDLDPANAANKEYLAKAEAKI 262          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A835ZH25_9STRA (SGTA_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH25_9STRA)

HSP 1 Score: 172 bits (436), Expect = 9.790e-45
Identity = 140/316 (44.30%), Postives = 188/316 (59.49%), Query Frame = 1
Query:  106 MSVDTPTMMLSVLEHLASAEG--DLPSESRTYVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGAGGDADEISTRGA 1047
            M+ D   +  +V+++L    G  D   +  + + +A ++L +AFG+   D  Q +ELS +P TL+SIF AG  A GA +A Q+   +  +  F +FV V+SAK       EG+  YD +M K++A FK +                XXXXXXXXXXXXXXXXXXXXXXXXX    AKA           EGN+ +  + +  AEA Y+ AL+LSP+GPNSH+Y CNRAAA C+L   D AV DC  +IDL+P+Y KAY RLGYAY+ +ED      AY K++E+EP N AN +SL++A AKL A   A     RGA
Sbjct:    1 MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAA--EGTPEYDVQMNKIIATFKTK----------FGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKA-----------EGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGA 293          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A7S2FWT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWT3_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.380e-39
Identity = 95/265 (35.85%), Postives = 140/265 (52.83%), Query Frame = 1
Query:  217 LSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGA 1011
            L+  F ++ +D  Q  E +L+  TL  +  AG   LGAKS  ++L ELQ ++ F QF+  V +KG+F   + G   Y  R  ++V KFK R   +                                      A  A   +E+KAE+ K EGN+ L AK+Y+ A   Y++A+++ P GP SH+Y  NRA A  YL ++  AV DC  AI+ NP+YAKAYTRLG A   L D+ +AV+ +KK++E+EP N ++ + L+ A  K  A
Sbjct:   41 LAENFSINTDDINQKEEYALESQTLLELLAAGKTQLGAKSYNEELEELQENKMFQQFLGSVKSKGFFNDTKPGEPEYKARYRRMVTKFKQRMNDSKANSKA--------------------------------AVAAGPTNEEKAEKFKVEGNETLKAKNYDAAVELYSKAIDVCPDGPKSHIYFANRAMARHYLKQHLGAVDDCNAAIERNPAYAKAYTRLGLAQQALNDWSSAVENHKKAVELEPSNKSSAQYLKTAQQKYAA 273          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A662X6P5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6P5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.470e-33
Identity = 91/249 (36.55%), Postives = 127/249 (51.00%), Query Frame = 1
Query:  286 TLESIFRAGCAALGAKSAGQQLAE---------LQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL 1005
            + E +F AG  ALG ++    +AE         L+  E + ++V  + +KG+FKG   GS  +  R  K +AKFK +                                         P   +KA  E KAEEVK  GN  L ++DY GA A Y EAL+LSP GP+SH+Y  N AAAL YLG+  D +  C+++I L PSY KAY+R+G A  QL+DY+ AV ++++ LE++  NAA    L  A  KL
Sbjct:   43 SFEEVFAAGLQALGLETGTAAVAEASVDEDPVVLKHPELWKKWVAKLESKGFFKGAAPGSSEHAARTTKALAKFKEK---------------------------------FGDVKPTAPVL-SKAEKEAKAEEVKARGNAALTSRDYAGAAALYREALQLSPDGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIALQPSYVKAYSRMGGAQVQLKDYDGAVDSFRRGLEVDSANAACRDGLADAERKL 257          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: K3WAR9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAR9_GLOUD)

HSP 1 Score: 139 bits (351), Expect = 7.490e-33
Identity = 93/273 (34.07%), Postives = 140/273 (51.28%), Query Frame = 1
Query:  217 LSSAFGLSLEDPKQVRELSLKPH-TLESIFRAGCAALGAK--------SAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEK--KAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 1002
            LS AF L++ D +Q R  +L    T E IF AG  AL  +        S  Q    L++ + + +++  +  K +F G+  GS+ +  R+ K +AKFK +                                         P   + + +EK  KAEE KG+GN  L A DY+ A   Y EAL+LSP+GPNSH+Y  N AAAL YLG+ D+ +   +++I L P+Y KAY+R+G+AY QL+D++ A+ A+++ LE++  NAA    L  A  K
Sbjct:   40 LSEAFKLNVHDEQQKRTYALSGSATFEDIFAAGLKALNIEIGAASPLDSVDQDPVVLKNPDLWKKWIAKLEEKNFFNGLPAGSDEHTARLKKALAKFKEK---------------------------------FGDVKKPAPTAPSMSKEEKEAKAEEAKGKGNLALSAGDYKQAAVHYEEALKLSPAGPNSHIYHSNLAAALTYLGKYDEVIDHSEKSIALKPAYVKAYSRMGHAYVQLKDFDGAIDAFRRGLEVDSTNAACKDGLAEAERK 279          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: H3GML2_PHYRM (STI1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GML2_PHYRM)

HSP 1 Score: 139 bits (349), Expect = 1.150e-32
Identity = 87/264 (32.95%), Postives = 137/264 (51.89%), Query Frame = 1
Query:  196 VASAISSLSSAFGLSLEDPKQVRELSLKPH-TLESIFRAGCAALGAKSAGQQLAE-----LQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAA 969
            + +A+S L+ AFG+ + D +Q R+L++    +   IF AG  AL  ++  ++  +      +  E + ++V  + AKG+FK    G+  +  R AK + KFK +                                             ++   E KAEEVK +GN  L  +DYEGA   Y EAL+LSP GP+SH+Y  N AAAL YLG+  D +  C+++I L P+Y KAY+RLG A  QL+D++ A+ ++++ LE++  NAA
Sbjct:   30 IDTALSRLTEAFGVDVHDAEQRRQLAVDSDISFNEIFAAGLKALNLETGAKEAVDEDPVVKKHPELWKKWVAKLEAKGFFKDAAPGTSEHATRTAKALGKFKEKFGDVKPEL-------------------------------------SQEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSPEGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIVLKPAYVKAYSRLGSAQLQLQDFDGAIDSFRRGLEVDSSNAA 256          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: D0MS16_PHYIT (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=D0MS16_PHYIT)

HSP 1 Score: 138 bits (347), Expect = 2.280e-32
Identity = 92/268 (34.33%), Postives = 138/268 (51.49%), Query Frame = 1
Query:  196 VASAISSLSSAFGLSLEDPKQVRELSLKPHT-LESIFRAGCAAL----GAKSAGQQLAE-----LQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAA 969
            V +A++SL+ AFG+++ D +Q R+L++   T  + IF AG  AL    GA    + +A+      +  E + +++  + +KG+FK    GS  Y  R  K +AKFK +                                              K   E KAEEVK +GN  L  +DYEGA   Y EAL+LS  GP+SH+Y  N AAAL YLG++ + +  C+ +I L PSY KAY+R+G A  QL+D++ A+  Y++ LE++  NAA
Sbjct:   30 VDAALTSLTEAFGMNVHDAEQKRQLAVNGDTSFDEIFAAGLKALNLETGAPGETKSMADEDPVVKKHPELWKKWLAKLESKGFFKDAAPGSGEYATRTNKALAKFKEKFGDVKPDLY-------------------------------------KEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSSDGPSSHIYHSNLAAALMYLGKHTEVIDHCEHSIALQPSYVKAYSRMGSAQVQLQDFDGAIDTYRRGLEVDSTNAA 260          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A421GVH7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GVH7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.800e-32
Identity = 98/290 (33.79%), Postives = 148/290 (51.03%), Query Frame = 1
Query:  133 LSVLEHLASAEGDLPSESRTYVASAISSLSSAFGLSLEDPKQVRELSLKPH-TLESIFRAGCAALGAK----------SAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAA 969
            LS +  L ++EG + SES   V  A+  LS AFG+S+ED +Q ++L++    + + IF AG   L  +          S  +     +  E + ++V  + +KG+F G E GS  Y +R AK +AKFK +                                           T +K   E KAEEVK EGN  L  +DYEGA   Y EAL+LS  GP+SH+Y  N AAAL YLG+  + +   +++I L P+Y KAY+R+G A  QL D++ A+ ++++ LE++  +AA
Sbjct:   13 LSWINELKTSEG-VDSES---VDVAVQCLSKAFGVSVEDAEQAQQLAVNGSASFDEIFAAGLKVLKLEIGTDAEAKEASVDEDPVAQKHPELWKKWVAKLESKGFFAGAEVGSSEYTKRTAKALAKFKEK----------------------------------FGDVKPVAPTMSKEEKEAKAEEVKAEGNAALSRRDYEGAATLYREALQLSADGPSSHIYHSNLAAALMYLGQYTEVIDHSEQSIALKPAYVKAYSRMGNAQVQLNDFDGAIDSFRRGLEVDSTSAA 264          
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Match: A0A484E3R1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3R1_BRELC)

HSP 1 Score: 134 bits (338), Expect = 7.070e-32
Identity = 93/279 (33.33%), Postives = 136/279 (48.75%), Query Frame = 1
Query:  196 VASAISSLSSAFGLSLEDPKQVRELSLKPHT-LESIFRAGCAALGAKS---------AGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAK 1002
            V  A+  L+ AFGLS+ DP+  R+L++   T  + I  AG  AL   +         A +     +  E + ++V  + +KG+FK    GS  Y  R  K ++KFK +    +                                        +K   E KAEEVK +GN  L ++DY+GA   Y EAL+LSP+GP SH+Y  N AAA  Y+G+  + +  C+++I L PSY KAYTRLG A  QL+D++ A+  Y++ LEI+  N A    L  A  K
Sbjct:   31 VDEALPRLAEAFGLSMHDPELKRQLAINSDTSFDDIVAAGLKALNLDTGTPSEVPSIAAEDPVVKKHPELWQKWVAKLESKGFFKDALPGSSEYTTRTNKALSKFKEKFGDVTPEL-------------------------------------SKEEKEVKAEEVKAQGNAALSSQDYDGAATLYREALQLSPNGPFSHIYHSNLAAAHMYMGKYTEVIDHCEQSIALKPSYMKAYTRLGSAQLQLQDFDGAIDTYRRGLEIDSTNDACRSGLAEAENK 272          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J668_9PHAE8.460e-18692.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
I2CPK1_NANGC2.500e-4939.18Conserved tpr domain protein (Fragment) n=1 Tax=Na... [more]
A0A835ZH25_9STRA9.790e-4544.30SGTA_dimer domain-containing protein n=1 Tax=Tribo... [more]
A0A7S2FWT3_9STRA2.380e-3935.85Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A662X6P5_9STRA1.470e-3336.55Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
K3WAR9_GLOUD7.490e-3334.07Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GML2_PHYRM1.150e-3232.95STI1 domain-containing protein n=1 Tax=Phytophthor... [more]
D0MS16_PHYIT2.280e-3234.33Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A421GVH7_9STRA2.800e-3233.79Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A484E3R1_BRELC7.070e-3233.33Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1473797..1477974 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score562.0
Seed ortholog evalue2.6e-157
Seed eggNOG ortholog2880.D7FN86
Preferred nameSGTB
Model size1473
KEGG koko:K16365
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007029,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010604,GO:0010605,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019222,GO:0019538,GO:0019941,GO:0030162,GO:0030163,GO:0030433,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032436,GO:0032459,GO:0032460,GO:0032947,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0042176,GO:0042177,GO:0042221,GO:0042802,GO:0042803,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043621,GO:0043632,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044877,GO:0045047,GO:0045048,GO:0045184,GO:0045732,GO:0045861,GO:0045862,GO:0046907,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051205,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061024,GO:0061136,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071816,GO:0071840,GO:0072379,GO:0072380,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901799,GO:1901800,GO:1903050,GO:1903051,GO:1903052,GO:1903069,GO:1903070,GO:1903071,GO:1903332,GO:1903334,GO:1903362,GO:1903363,GO:1903364,GO:1903573,GO:1903644,GO:1903646,GO:1904288,GO:1904292,GO:1904293,GO:1904294,GO:1905897,GO:1905898,GO:2000058,GO:2000059,GO:2000060
Exons4
EggNOG free text desc.negative regulation of ER-associated ubiquitin-dependent protein catabolic process
EggNOG OGsCOG0457@1,KOG0553@2759
Ec32 ortholog descriptionTetratricopeptide TPR1
Ec32 orthologEc-15_003360.1
Cds size1368
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147,ko04516
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348708.5368357-UTR-Ecto-sp6_S_contig10:1473796..14738961682348708.5368357-UTR-Ecto-sp6_S_contig10:1473796..1473896Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1473797..1473896 +
1682348708.5491807-UTR-Ecto-sp6_S_contig10:1475046..14750511682348708.5491807-UTR-Ecto-sp6_S_contig10:1475046..1475051Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1475047..1475051 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348708.558193-CDS-Ecto-sp6_S_contig10:1475051..14752041682348708.558193-CDS-Ecto-sp6_S_contig10:1475051..1475204Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1475052..1475204 +
1682348708.5666642-CDS-Ecto-sp6_S_contig10:1475638..14762801682348708.5666642-CDS-Ecto-sp6_S_contig10:1475638..1476280Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1475639..1476280 +
1682348708.5754657-CDS-Ecto-sp6_S_contig10:1477401..14779741682348708.5754657-CDS-Ecto-sp6_S_contig10:1477401..1477974Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1477402..1477974 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.560.1prot_Ecto-sp6_S_contig10.560.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1475052..1477974 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.560.1

>prot_Ecto-sp6_S_contig10.560.1 ID=prot_Ecto-sp6_S_contig10.560.1|Name=mRNA_Ecto-sp6_S_contig10.560.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=456bp
MSVDTPTMMLSVLEHLASAEGDLPSESRTYVASAISSLSSAFGLSLEDPK
QVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSA
KGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGGASSRSAA
AAPAAAAAAAAATSRAAAAPATGAKAADEKKAEEVKGEGNKLLLAKDYEG
AEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNP
SYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKL
GAGGDADEISTRGAGGGAPGAGGMPDLSGLASMMGGAGGAGGAGGGLASM
IQGLAGVGGGGGAGGEGGAPAGGLAGMLNNPNMMAQAQQMMQNPAMMAQV
QNMMSNPAMMQGLMGMMGGGGGGGGAPDMSALAGMMGGGAPGAGGSGSND
DENNS*
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mRNA from alignment at Ecto-sp6_S_contig10:1473797..1477974+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.560.1 ID=mRNA_Ecto-sp6_S_contig10.560.1|Name=mRNA_Ecto-sp6_S_contig10.560.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4178bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1473797..1477974+ (Ectocarpus species6 EcLAC_371)
TATTATAGTCATAGTCTTTGGCTCTGCAGTCTGGGAGAGAGAGCACCCTG CACAGTCCCTCTCTCTCTTCGCTCTGGTGGTCGCCGCTTCCCCTAACCAG GTGAAATGTGGACCTTTTGTGAGGGATATGGCATTTGGCGTGTGTGTGAT TGTCTGCTTTCACTTCCGTTCGACCTTGCACCCTTGCTTTGCTGCCACGA AACATTTTCTAGAAACAAAGAACAGATGTGCGGTGTGATCTCAGATGCTG CTGTCTACCTACCCCGCTGCTGCTGCTGCCCTGCCCTCGCTCCTGGAACA CCTGCACGACAAAACAGCACCCTCGAGACAGCTGATGGATAGTTCCTTGT TGTTGCCCACGAGTAGTTCTTCCCAGCATAACTTTGGACCCAACTTTCAA CTTGAGTGGATAGGGTAGACTCACGGACTTGCTGCCCTTCTTTCGGCGGA GGTTCACGTCCAGCTGGAAGTGTAATGGTGGCCATGCGTATGTTCCCTTA GTTTTGTGGCGTCCTGATGCCTCTAGACAGCTGCACAACCGCGTACTCCT CTCTAATGGTGCATCTGCTGTGAGTTTGCCCTGCTTTACATTTTCGCACC ACCCAAGAAGGAGGTGTACTGCTGTCATTGCTAGTCTTTCTGGCGGCGTC CGTGCAACACACCGAAGGCAGTGCGCGTGTTTGGTGTTTGGTATATATTC GCTTTGTTGCTGTGTGCACCTTCCTCCTGTCCGACCCCGGCTTGCGCGCG AAACATATTTCGACGCGTGTCAACTGGCGCCCAGAACAGGTGGGACGAGA AAAAGCGCGCGGCGACACTGCGAGTGAATGTCTTGAAGATGTGCTGGGGT GCCTTGAGCGCCAACGCGCAGACCAAACCGTTCTCCAACAAACCGCTAGC GCTGCTCTGCACTTCATTCCCGAGTTCAACTTCCCACAGGCGTTTCCTTC CGTTTTTCCTCCTCCCTGTCAGCGTCGCGGGTATATACCGATTGCGCCGG GAATCTCTCTCCCTGAAATTCGTCTACACAACTTTTGCCCATACGTGCAG TGGTATGCACATGACTCGCTTCGTTTTTTTTTTTTTTTGTCGACGTGACC AACGAACTCAACGATGGAAGCTAATTTTGTCGAGAACGCGTGCGACCGTT TCATCCAAGCTCATGTTTGGATCTAAACGCCAACCATGCTCACCACTCCC GATCCTAACTTGCGACTCATCCCGCAAAACCCTGCCGCCCCGCCCCGCAG AAATCATGAGTGTGGACACCCCGACCATGATGCTATCGGTGCTCGAGCAC CTTGCTTCCGCCGAGGGCGACTTGCCGTCGGAGTCGCGAACGTACGTGGC GTCGGCTATCTCCAGCCTCTCTTCCGCGTTCGGCCTGAGCCTGGAAGACC CAAAGCAGGTCAGTAGGCCCCCTTTTCTCGAATTGATGCGGCTTTCTACA GGCGGCAAGTAATTATGAGATTAGAGGGTCGGGACCTTTGAAATCATAAT CATCGCACTCAAGTGGCAACGTACATTCGTTCTCCTCTGTTTCCAAGCAC ATGTAGCAGTCACGCAGCCAAATCGGATCGACACATCGTTAGTGCAACAA GCCCGTGCTCCCACTCTTGTCGCCAACAACCAAGCACGAATGTTGCACGG CCTTGCACTGTCAAACAATGCCTCCGCCGAACCGTCTCGGAAGCCACACA GACTGACGCCGTCGCCGTGGCAAGCCCCTCTAAGCCCTTAAGCTTAACTT CACAGCGAGAAAAGACGGGTTCTCTTAAGCTTATCGCCACTTAGAAAAAC ACGGGTTCTCGATCTCACACAAGCCATCTGTTCCCTTGACAGGTTCGCGA GCTGTCCCTGAAGCCGCACACCTTGGAGTCCATCTTCCGCGCGGGCTGCG CCGCCCTCGGAGCCAAGAGCGCCGGCCAGCAGCTCGCCGAGCTGCAGTCC TCCGAAGCGTTCAGCCAGTTCGTCAAGGTCGTCTCCGCCAAGGGATACTT CAAGGGGGTGGAGGAGGGCAGCGAGGGCTACGACGAGCGCATGGCGAAGC TCGTGGCCAAGTTCAAGGCGCGCACGGAAGCGGCCAGCGGCGGGCCTCCC GTCGAAGAGGCCGGGGGGGCCTCGTCCCGCTCTGCTGCTGCTGCTCCGGC GGCGGCGGCGGCGGCGGCGGCCGCGACGAGTAGAGCGGCCGCTGCGCCGG CTACTGGGGCGAAGGCCGCGGACGAGAAGAAGGCGGAGGAGGTCAAGGGG GAGGGGAACAAGCTCTTGCTGGCCAAGGACTACGAGGGCGCCGAGGCGAA GTACACCGAGGCGCTCGAGCTGTCCCCCTCGGGGCCCAACAGCCACGTCT ACCTTTGCAACCGGGCGGCCGCGCTGTGCTACCTCGGCCGCAACGACGAC GCCGTCGTCGACTGCCAGGAGGCCATCGACCTCAACCCGTCGTACGCGAA GGCGTACACCAGGCTCGGCTACGCCTACTTCCAGGTGCGGTGCCTAGAAG GTGTTGTAATCGGTAGCGGCTGAGTTTGTTAGTTCGACCTATTGGGAGAA TATTTTGGTGTCGTTCCCATGGGAGGTTCCAGGTGCGGTCCCTCAAAGGT TGTAGCGTGTGCGGCTGAGTTTGTGGGAATATCCTCTTTGGGAAATGCTT TTTCTGTCGTATTGTTGGAGACCCTTGAGGCGCAACGCCTTCGAGAACTG TGAGCATTGCAAACCAGCACAAGCTCACTTGAGAAGGTGGCTGGGTGTGG TTACCGTTTTGACCTGTGGCCACTCGGGTTCTAGGCATGTCTTCTGTGTC GATGTTGAAGTCCCGCGTGGAGCCCGTTCACCGGCAGTTCTTGGACTCCT GTGTTCTGTAGCGCCTTCCGCCGCGGGAAGAGCGTCGTGGACGCTTGTCC TTGCTTCGCGGTGTTGGGTGGCCAGGCTGCGGCCCTGACCTTCGTACGCC TACCGTGCGAGGCGGAGAGATGGCACGCCCCCTTGAACGGCTTTCAAAGA TCGATTGCGGCACAACCAAGGGGGTACGGAAAGAGCCGATACGTCTACGG AAAGCCCTCGACGATATGTTTCCAAAACGAAAGTTCTTGTGGTGTTGGCA CAAGCTTGGTTGTGGGGCAATCGCAATCGAGCTTTGAAAGTCGCTCTAAC GGGGTGCCATCTCTCCGCCTCTTCCGGTAGCTCTGGCAAGCTCCTTGTTT TTTTTCGAGCCGTTTGGGGCGCGTTGCGATCAACACCCACCCTTGGTTGC CTTCCAGCAATCTCGTCCATTCAGTTGTCTCTTGGTAAGCATCAACCCTA CTCCCGAGAGTTGCGGCGGGTTGTCGTTGTTTTCCCTGTGCGGACGCTGC TGGCCTTCCGCTGCTTCTCACCCATGACATCAACATGCTGGGGGTGTCCG ATCATACGATAGAACTTGGATTTCGCTTAAACGTTTCCGCGAAGAGAGTC GAACTATGAGCCTCAATCAATAGGAAACCCACCCCTCATCTGGTCCGTGT CTCTGTTCGCATCAACCCTTGGCCCCAACACTCACCCCTTTCGTCGTCCG TGTCTCTCTTGGCGCCACCCTTGGCAAACGCTCTTACGGGGACGACCAAC ATCAGTTGGAAGACTACGAAGCGGCTGTCAAGGCCTACAAGAAGAGCCTC GAAATTGAGCCGGGGAACGCTGCAAACACCAAGAGCCTCAGGAGGGCGAC CGCCAAGCTTGGCGCGGGGGGGGACGCGGACGAGATCTCCACAAGGGGGG CGGGCGGGGGCGCCCCGGGCGCGGGCGGCATGCCGGACTTGTCCGGCCTG GCGTCGATGATGGGAGGGGCCGGAGGGGCGGGGGGGGCGGGGGGCGGCTT GGCGTCGATGATTCAGGGTTTGGCCGGGGTTGGCGGTGGTGGCGGCGCCG GCGGAGAGGGGGGAGCCCCGGCCGGTGGGCTCGCGGGCATGCTCAACAAC CCCAACATGATGGCACAGGCGCAGCAAATGATGCAGAACCCGGCGATGAT GGCACAGGTGCAGAACATGATGTCGAACCCGGCGATGATGCAGGGGCTCA TGGGCATGATGGGCGGGGGCGGGGGCGGGGGCGGGGCGCCGGATATGTCG GCGCTGGCGGGCATGATGGGCGGAGGTGCTCCGGGGGCGGGTGGTTCCGG GAGCAACGACGACGAAAACAACAGCTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1473797..1477974+

>mRNA_Ecto-sp6_S_contig10.560.1 ID=mRNA_Ecto-sp6_S_contig10.560.1|Name=mRNA_Ecto-sp6_S_contig10.560.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1368bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1473797..1477974+ (Ectocarpus species6 EcLAC_371)
ATGAGTGTGGACACCCCGACCATGATGCTATCGGTGCTCGAGCACCTTGC
TTCCGCCGAGGGCGACTTGCCGTCGGAGTCGCGAACGTACGTGGCGTCGG
CTATCTCCAGCCTCTCTTCCGCGTTCGGCCTGAGCCTGGAAGACCCAAAG
CAGGTTCGCGAGCTGTCCCTGAAGCCGCACACCTTGGAGTCCATCTTCCG
CGCGGGCTGCGCCGCCCTCGGAGCCAAGAGCGCCGGCCAGCAGCTCGCCG
AGCTGCAGTCCTCCGAAGCGTTCAGCCAGTTCGTCAAGGTCGTCTCCGCC
AAGGGATACTTCAAGGGGGTGGAGGAGGGCAGCGAGGGCTACGACGAGCG
CATGGCGAAGCTCGTGGCCAAGTTCAAGGCGCGCACGGAAGCGGCCAGCG
GCGGGCCTCCCGTCGAAGAGGCCGGGGGGGCCTCGTCCCGCTCTGCTGCT
GCTGCTCCGGCGGCGGCGGCGGCGGCGGCGGCCGCGACGAGTAGAGCGGC
CGCTGCGCCGGCTACTGGGGCGAAGGCCGCGGACGAGAAGAAGGCGGAGG
AGGTCAAGGGGGAGGGGAACAAGCTCTTGCTGGCCAAGGACTACGAGGGC
GCCGAGGCGAAGTACACCGAGGCGCTCGAGCTGTCCCCCTCGGGGCCCAA
CAGCCACGTCTACCTTTGCAACCGGGCGGCCGCGCTGTGCTACCTCGGCC
GCAACGACGACGCCGTCGTCGACTGCCAGGAGGCCATCGACCTCAACCCG
TCGTACGCGAAGGCGTACACCAGGCTCGGCTACGCCTACTTCCAGTTGGA
AGACTACGAAGCGGCTGTCAAGGCCTACAAGAAGAGCCTCGAAATTGAGC
CGGGGAACGCTGCAAACACCAAGAGCCTCAGGAGGGCGACCGCCAAGCTT
GGCGCGGGGGGGGACGCGGACGAGATCTCCACAAGGGGGGCGGGCGGGGG
CGCCCCGGGCGCGGGCGGCATGCCGGACTTGTCCGGCCTGGCGTCGATGA
TGGGAGGGGCCGGAGGGGCGGGGGGGGCGGGGGGCGGCTTGGCGTCGATG
ATTCAGGGTTTGGCCGGGGTTGGCGGTGGTGGCGGCGCCGGCGGAGAGGG
GGGAGCCCCGGCCGGTGGGCTCGCGGGCATGCTCAACAACCCCAACATGA
TGGCACAGGCGCAGCAAATGATGCAGAACCCGGCGATGATGGCACAGGTG
CAGAACATGATGTCGAACCCGGCGATGATGCAGGGGCTCATGGGCATGAT
GGGCGGGGGCGGGGGCGGGGGCGGGGCGCCGGATATGTCGGCGCTGGCGG
GCATGATGGGCGGAGGTGCTCCGGGGGCGGGTGGTTCCGGGAGCAACGAC
GACGAAAACAACAGCTGA
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