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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 303 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-00_007010.1 |
| Cds size | 303 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348692.9906075-CDS-Ecto-sp6_S_contig10:1285191..1285401 | 1682348692.9906075-CDS-Ecto-sp6_S_contig10:1285191..1285401 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig10 1285192..1285401 + |
| 1682348693.0005984-CDS-Ecto-sp6_S_contig10:1294120..1294213 | 1682348693.0005984-CDS-Ecto-sp6_S_contig10:1294120..1294213 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig10 1294121..1294213 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.544.1 >prot_Ecto-sp6_S_contig10.544.1 ID=prot_Ecto-sp6_S_contig10.544.1|Name=mRNA_Ecto-sp6_S_contig10.544.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=101bp
KRVSSSSARQPCCQPVLFGLQLACLDRWNDPNCCVLQQNNQKSPRRASAL
EFSTGSSAARSSYCQRRNTNSARILLFFKVHFSQSSPSIPARPAQPWPQR
* back to topmRNA from alignment at Ecto-sp6_S_contig10:1285192..1294213+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig10.544.1 ID=mRNA_Ecto-sp6_S_contig10.544.1|Name=mRNA_Ecto-sp6_S_contig10.544.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9022bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1285192..1294213+ (Ectocarpus species6 EcLAC_371)
AAACGAGTCTCCAGCTCTTCCGCTAGACAACCCTGTTGCCAGCCAGTACT
GTTTGGCCTGCAGCTGGCCTGTCTCGACCGATGGAACGACCCCAACTGCT
GCGTACTTCAGCAAAATAACCAAAAATCCCCAAGGAGAGCATCAGCCCTG
GAATTTTCGACGGGTTCTTCTGCAGCTCGCTCCTCCTACTGTCAGCGACG
AAACACAAACGTAAGCTCCTATGATTGACGTCATGTGTGTAGTAGACTAG
ATGTAAACCGCGGTTCTTTTTCCGTCGCGACCTCTCGGTTATACTTACTT
GTGTGCTTGAAATTTTGTGTGGAAGACGCTACCGGGGACTGGCTAATATT
CCTGTAGCCAGTCGGCCCTGTTGCCACACACTTTGCTGCGATTGATTGCC
GTTGCCGTTCATGCTGACCGCCGCCCTTTCTATGTCTCTGTTCCCCCTAA
CACAACAAGGTGAACTCCGTTCTGATACAAACGAACTGCAATCACCTTCC
TACCATGTTATACTACATGTGTTGTCAATCCGATCTAGACTACTCCATAG
TGCGGTGTAAATTTCGATCTGTAGGTTGTCAAATGAGAGGCGCACAACCT
TGTTTTTCTTTTAATTCAACACAGCATACAATAATGTACTTACAGCAGTG
CCGTAGTACAAGGTCTCCCTTCAAGACGTGGTGGGTGTCAAGCCTCCCGC
GGGCGACGCAAGACCACATGCGCATTGTCCGAAATAGGCTGTGTTTTATT
TTGGATGGGCAGATGCATAACGCTCGCATGTCGGCACATTTTTTCTTGTC
TTCACTTCAATTCAGCGCTCACAGCACTATAATAGTGCCATTTACCAACC
CGTGGTCACACAGAAGAGCCCCCCTCTACCCTCCCCTCCTGCGGTGCTTT
GCCTTCGATTTTTAATTCGAGAAGAGTTCAGCACTCTCTTCCCTCTGTGT
ACACACGAACAAGGGCTATCCACTAGGCCGGCACATATTCTACGTTGAAG
CCAGCTCGAGCGGACAATAACTTGCCAGGGCAAAATCTACTTGATCTTTG
TTAACATCACTGCTGTGGGTGCATGCATGCGCTGAGACTTGTCTACAGCG
GCGAGCGGCGTTTGGCTTGGCCCGCTGCGAAGTAGGTGTAGAAGAGAAAA
TATAGGTAGGTGCTGTTGGACATTGCGTGCGATAACACGAAGAGTCACGG
CGAGGTGGAATCAGCGAGTGATGAATGATGATGATGCAGATGAACATCTA
CCTGTCAGGCAAGAGGCAATTTTTTTTAGTATTAAAGGTTCAGTTCTGCT
CGGTACAAAGACGAAGGCTGCAAACCGGACACCAACGATTTTCAGCCCGA
AATACCACAAACCGAGGTGATGGCGCCAGCTTTGAAGAGGCAAAACATGA
TTCATTGCGGGGGGGGGCATATGATCAGGTCTTTGTCCGGCTAGTCTAGT
TGTCGTTGAGAAATAAATCTGTTTGAAAAGTGCGTGCGGGCCATTTTCCT
TTCTGCCGTTTTTTATGTGTTTCAGAAATGGTTCTCCAGACCCTTGTCTG
CGCGGAACGCGTCCCCGGGGTTAAATAGAGCCAGTTTTTGCGACTTTGAC
CGTCAACCACGCTCCACGGAGGCCTACCGAGCTCCGCGCATGAGCGTTGA
TGTGCCGACGAGCCTCGTCCGTGCCCCTGAGAAGGAAGCCCGAGAAAATA
CTCACTGCCACGATAAATGATCAAACCTTAGACTATGTGTACATACACAC
AAGGTCTCCCTTTCGGGACGCGGGTGTCAAGGCTCCCGCGGGCGACGCAA
GGCCACATGCGCATTGCCCGAAGAGGGTTGTGTGTCTTATGTTTGATGGA
CGTGTTATTTTACGCTCGTCTTCCGTACAAAACATTGCGCACGTAGTTAT
TCGACATTGGAGCCAGCTCGACCGGACAACAACTTGCCAGCGAAAAAAAA
AGGCTTCTACTATGATGTCTTCTTAGAGTTATTCAAAACTCGAAAAATGC
ATGAAACCAGTGGAAGAGCCCGAAAAGTGGATGAATCGAGTTTATATCGG
AGGGGACTTTTGGGCAAAAATGCATGAATCGTGAGAAAAAATATGTTTGG
GGCTCCCCAAGTTGTTGTTGTTGTTGTTGCTCTCACATTAGCTCTATAGT
CCACAAAAATGGGGAGCCCGTGGTCGTAAAACCCGGCACATACTACGCCG
CGGGGAAACAAAACAGGAATAGAGTACAAACCACTCGGAAAAAGAAAACA
AAATGATAGAAAGAAAAGAACAGCTACCGCACCGACCGTTCGAGAAAAGG
GGCCCTAGGAAACCGATCAAAATAAAACAAACAAAAATAAAGGCAAGAAT
AAAACGGGAAAAAGGAATGCATCCCACACCTGCCTAAAAAAATCAAAGGG
TTTCGTACCAGCATCAGGCACTACGCACCAGGGCATGGGAGTAATCGAGG
CAACAGAACAAAGAGGCGGCAGATGGGTAGACAGCCATCTCTATATAAGC
AAAAGCAACGGCAAAAGGGAGATCAAGGTACCCAGCAAGGCAGAGTAGGC
AGGGAGGACATGAAAAAAGAAGCACAGCACTGAGGCCGAAGGCAATACAA
AGGACATACAGGAATATAGCATACAGCAGCAGGGAGGGGAACAGGGCGCA
ACAACATCAGCCGGGTACATAGTTCGCCACAAGTGCTGCCTCGGCCGCCC
TACTCGCTTCTACAGCAGCAGCGCCCGGTCGCCGTTTCTTCCCCCCCACC
GCCGCTTCCCCGACTCTCTTTCTCTTCGTTCCCAAGATGGCCGTACTCCC
TGCTTCTGCTTCCCTCGCGCGCTGGCACTTGGCGGACGCTTCTGCCTCCT
GTCTGTGCCATTTCCTCATGAACCGTGCCGCCCCGTCCTCGACCTTGTTG
TACCACGCCTCCGGGTCCTTGGCGCTCTCTTTCCATTCCCCCCCTTCCTT
TTCGTCTCCCATGTTGAACGCCACGAGGTCCTCTCTGACGAGACACCCAG
TCGCTCTCCTGCCCGCCCCGGTATCCCACGCCCCCCGCCATCGCTCCTAC
TGGGGAGGCGGTTGTCCTCCATGCGCATAACGAAGCCCGCGAAGCACAGT
CTCCGTTTGCGAACGGTGGCCTCGATGGTTTCCTCGCAGCCGGGCTGGAT
GAGGGCCTGGGCATAGGACAGGGGGCGGTCTGAGCGTTTCCGCTTGCTCC
AGCCGATGCACCGTGTCAGGAACTGGCGGTGGGTCCCATTGAGCTTCGTG
TAGTGCTCCGCTGTTAGGCTTCACGAGGCGCACCCGTATAGGATAGTCTC
CACCACCTCAGCCTGGAGTAGCCGGATCTTGAGCTGGCGGTCGGCCCGTC
GCCTGTCGTGCATCGAAGCACTGTTCCGGCGGTAGCACTTCCACGCTCGG
CAGCTGCGGTTCGTGATCTCCCGGTCGGCCTTCCCGTCCGCGCAGATGGT
ATGTCCGAGGTACACAAATCGATCTGTCTGCTCGTACGTCTGGCCGGCGG
CGCTGACCGTGAACGGGCGTTCCTCGATCCCTTTCGGCAGCATGCATATG
ATCTCCGTCTTTGGCTCCGATACCATCAGTCCGAACAGGCCGGCTACGCG
CACGATGACCGATATCATCTTCTCGACACTCTCCGGCGAGCGCGAGACGA
TAGCCGCGTCGTCAGCGTAGAGCATGGCCCACAGGGCCTCCATGTCCGTC
ACCACCGTCGTCTTCTTCCCCGCCGACCTGCCCTTCTTGCCTGTGTACTC
CACTTGTGTCCCGATCTTGACCATGTCCGCCGTTATCTTGGGGATCCTTG
TCGAACTCGGCCACGGCGACCATGAGCATCGCGGCGGGGCCAGGTTGCAT
CCCTGTCGGAGGCCTTGGCCCACGTCGAACCATTCCGAGTACTGCCCGTC
GTCCGTTCGGACGCGCGCCCTCATGCCCTCGTGGAAGTGACGAATGACCG
CCAGCATCTTCGGGGGCACGCCGAAGCGTCGGAGCACGTCCCACAGCAGT
AGGTCTCGGTCCACCGAATCGTACGCCTTGGTGAGGTCGACGAAGAACGC
GAACACCGCAGTACTCTTCTTCCTCGCGAGCTCATGGAGCCGCTGGATCG
CGAACAGCATGTCGAGCGTCGACCGGTGTGGGCGGAAACCGCTCTGCTCC
TCCGGGAGGATGCCCTCTCGCTCGCAGTAGTGGCTCAATCGTGTAGCGAC
GACCTCAAGCAGCGCCTTGCCGGCATGTGCGACGAGAGCGATGCCCCGGT
AGTTGCCGCACTCCATCGTGTCCCCCCTCTTGAACAGCACTTTGATGGTG
GCATCCTCCCACTGCTGTGGTACGTCCCCCGTCTGCCACACGTCCGCGAC
GATGGCGTGGAATTCGCGGAGGAGGCCTCGATCTCCGTCCAGGAAAAGCT
TGATCAGCTCAGCCGGTAGGTCGTCCGGCCCGACGGCCTTTCTGTTGGCC
ATTTCCCGTACCACTTCCTCAACCTCGAATAGAGATGGGATGTCGTCGAG
TGGCACGCACGTGGGCCACTGCTTGACCTTGTCAGCCGCATTCAGGTCGA
TGGTCGGCGACTTGGTGTTGAGAAGCTTGTGGAACCACCGCGCCCACCGC
TGGCGGATAAACGTAGGGTCCCGAAGGACCTTGCCGTCCTCGTCCTTGAT
GTTCTGAGAGGTGAACGACCACTTACCTTCGATGTCGATCATCTTCAGGT
GCCTGTAAAAACTCGCCTGATCCTCCTCGCAGCTCTTCTTCTCGAGCTGC
CGTACACAGCACTCGAAGAACGTTTCCAGTGCTCTCCACCTCGCGATGCT
GCGCTTCTTCCGCGCCGTATTGAGCATCGCCTTCAGGGTCGCCTCGAAGA
CGCTGTTCTTTAAGGCCCCACGCAGTTGCTGCTGGGCCGCCCGAATCTCT
TTAGACGCTTCAGAGATCTCGTGCTGCGCTTCGCTCGTGTACCAGCCTCT
CTGCCCTCGTGCGCACCTCGCCAGCGGCGCGGTCTCGGCAGCGGCCGACA
TCACCATATCCGTCAGCTCGGCGGCGGTCTCTCCCGTTGGCCGCCTGGGC
GCCGTGGGCGGAGGGCGGCTGGAGGCCCTGTCTTGGAAGGCGGTCCGTAG
GTGGTTGTCCTTACTTATTTGCTCGAGCTCGAGGTCGATACGGATCCGGC
TGCTTCCGCTGTTCCCCCGCACTCGTCGGTTGGGTGCGACACGGGGGGGG
AGGCGGACAGTCGTAAGCACGAGGTTGTGGTCAGAGTCCTTGAAGTCGAC
ATGTTTGACGGAGACATTACGCACGAAACACCGGTCCGTCTGACGCATGC
GGATGAAGTCGAGGCGGTACTTCTCCTTCCCCTTGTTGGAGCTCTGGAAC
GTGCGCGCTGCACTCCACCTTTTGGTGTCCGAAAGTAGGTGTTGATCAGG
GAGAGTTGGTTGTCTGATGCCAGTCCAAGGAGTCATTCCCCGTTGTTGTT
TATACTGTCGCGTCCGTACGTGCCCATAATCTTGGCATCGCAGCACCCGT
CTCGCCTCCTGCCAGTGCGTGCGTTGGCATCCATTAGCACCACGAGATGG
TCACGGCTGTGAACCTCCCGGATCGCTGCGTCGAGAGCAGTCCAGAAGGA
GCCTTTGGCGTTAACATCACCGCCCGCGGTGGTGCGGACAGCTGCCGTGG
TATGTATTTGTGTTCCGAGACGAACATACTGCCCTCTCTATCTCCCTCTC
TCCCTCTCCTCTCTACTCGCTTTTGCAGCAAACATCACCACCGCCTTCAC
AACAGCAAAGGCACAGCACACAATCATAACAACGCCGCCACCACCGCCAG
CCCCCAAGCAAGCTTTCGGGCGCTGCCCGGACGATTTTTGTTGTGCTGCA
TGCGTATCAACGAGTACGTGAGGTTGCTGCATGCTGCTGCACCCTCTCTT
TTCCCCTCTGCCCTCCTCTCTCGTCGTGCTCCTTTTTCTTTCTCGCTTTC
TCTGGTCCCGCCATCGCACGCAAGCACAGACGAACTAACGAACAGACACA
GTTCCACAAGGCTCGCCGCGTAGCTTGTGGGCTGCCCCGTTATTTTTGTG
GGGGGGAGGGCGGCTCTTCCTAGTCGGCATGGCGGGAGGCTGGAGGTTGT
CGTTGCCATTGATGCACAGGGTGTGCGTATATGCCTGCCTGCCTGTCTTT
TCTAACCTCTCTCCCATTTTCTCTTTGGCACCAAAAAAGAGAAGAAGGAC
CAACGGTTTGTTATCATCAACGTGCCCGAGTGCCAACATACAGAGTATCA
GCTAGCGTGGGATGGGGGTGCTCTTGGCAGAGACGAACGCGCCGTGTCCG
CTATTCGTTCACTACGTAAGGGTGTGCATATTCGTATCACCTTGACAAAA
GGCACTCTAATTTCGCTTGCTGCTTGTTTCCGGTTGATCAAATTTGGCTG
CACCACAACGGCAGCCCACCTGCCCAACACCAGCTGTCCGAGGATGTATT
GGCGCAGGCTAACAGCCCTCCTGTGTTTTTACCCTGTGAAGATCTATTCT
CGACTTTTACATCACGAGAGTTTTCCACCAAAATGTACCAAAGCAGCGAA
AGGCCCAAAAAAGTCCCGCCGGTCCATGGATCATGTTTTAAATAACTCTC
TTGTGATGATGGCAAAGTTCCGATAAGAACCGAATTTGATATGAGAACCG
AATTTTATATCCGAAACAACACCACAAACAAGAACATGACATGTTCAACA
CTGCGGGTGCATGCGCGAAAACTTGCCTACAGCAGCAGAGTTTCACTTAG
CCCACTGCGAAGTGTAAAAGAGCAAACGTAGGTACTGTTGTTGGACTTTT
CGATGACACGAAGAGTCACAGCGATGTGAAATAGAGGAGGTGATGAAGCA
AGAGGCCAATAATATTGCAAACTGTCCACCTGGGTTGCAAGCCCCCACAA
AAAGTTTTTTTTTTATTAAGACAAGGCATCGATCACGCGGAGCCCCTACA
ACGGCCAGATTTCTATGGGACAGGCCGTTATTCGTCAACCACTCCGGCTG
TAGTGGGGGTCCAAAATGTTGCCCACGTTCTAAAGCAACCTTAGGCATGT
CTCTACAGCATCGTGCCGTAAAAATATTGGACTGGATCGTTTTTTGAAGG
TGTAAAAAGAGCGTTGACCTTCGGGGGAGCTTGGCTGAGAATCCAAACAA
AATTGGAGGTAGACATACACGTGGGTCGTGTTTGGTCGATATTATAGACG
AAAGAATGGGGGCTAGATCGAGTGCTTCACGGGAACGACCCTCGTAGCGG
CGATGTAAAATCGCGCCAACCCTCAATGCTATACCCCCATGTAATCATCT
CTGTCTGGCGAAGTCTCGAGCGAGTTCGTCAACTCCTTCGCAGGTGTATG
GCAGCGTGAAGTTTGATGCTGACAGCTGTGGAACGGGCTTGCCAGGTTTA
GAGCGAAACCAGGGCAAACCAAATGTCTGCGCGTGTAGAACATGACATGC
TTGAGGTATCCTGCAGGTTCCATGGCACGTAGCCATCCATCTGTGTGAGG
AGCACCAGCAGTGACAAAGGTGTACGCCAGATGGTGCGCTGGGCAACCCA
TCATGGGAGCTCAAGTGGGGTATAATCGATCTTAGCGGAGCCCCTTTGTC
ATAGTTTTTTTGCTTTCTGTGTGACTTGCAACCCGGGTGATGGGTTTCAG
AATTGGTTAGTCAGGCATTGCCTGCGCGGAACGCGCCCCCGGGGTTTCAA
TCCAGTTTTCACAACTTTGACCGTCAACCACACGCGCCACGGAGGCCTGC
CGAGCTCCGGGCACGAGCGTCGACATACCGACGAGCCTCCTGTGTGCCCC
CGACAAGGAATTGCGAGAAAAGACTCGATGCCACGAGAGAAAGAAATGCC
GGAGCAGGAAAAGTGACAAGGTCTTTATGTACATACAAGGTCTCCCTTTC
GGGACGTGGGTCTCAAGCCTCTCGCGGGCGACGCAAGACCACATGCGCGT
TGCCCGAAATAGCCGGTTTCCTTCCACTCACTGAACAGATTTCAACACAT
CCCTTTCGACTGGGGTTATATCTCGAACGGATTGTCTTCCTGTGAGATTA
CGTATACTTTTTAGAAAACAAACGTAACCTCCTTTGTACATGCCGCGTGT
ATTGTAGACTACCGTAAATGGCACAAGATAACACACACCCTGGACCGATT
TTCAAACCTCGATTTCTCAACAACAGAAAGAGTCACAGCGCCAAGAACGG
TGGCGTCGAAGCTGTTTCGTCGAGAGCTTTCCGGCAATGTGCTGTTTCAT
TTATGCATCCTCTTTGTCATGGTGTAATCGAGCTTTGAAAATTGCTCCAG
GAGGTGTGTTATCTTGTGTCATATACGGTACATGTAGACCACGGCTCTTT
TTCGGTGTTCCTCTCGGTTATTTGTACTCTTGTTCATTTTTTCTCGAAGC
CGCCAGCAGGGACTGCTTGGCTTGTAGCCAGTCGTTCCTGTTTCCACATG
TTTGATGCTTGAGGATGCTTCATAAAGCCTGCATGATAAGATGTATCAGA
GTTTTGATTCTTGCCTCAATCAAGCTCGAGTAGGAGGGCAATCAAGGAGG
TGTTTCCTCCTTGGGATTTGTTTTACAGATCACAGTATACAGATCACAGT
AGTCTACTTAGGTCGATTGGCGCCACGTTCGGGCGAGCTTTGTGTGTGCA
AGCAAGGATCGCCATCCCTACGCTCGGCGCTTATGTGCGAAATTGAACTG
AAGTAGGGTGTAGTGAACGTTCAGACGTCTTGGCGCATGTATTGTAGTAC
TTTGGAGAGAGGCCCACGCTTGTTGTATCCACGCACGCACCTCTAACGAT
GGAACCCACGCCGGCCTCTCCTCGTCTCCCTGGCATCTTAGTGCTATCCA
AGAAGTAGGTCAGCAATGCCTTTCTCTTCAGTCTCTTACGGCGCACGCAC
GCTTGCTCTTTCCGTTTTTTGTCTGACAGAGTGCACGGATACTGCTCTTC
TTCAAGGTCCACTTCTCACAAAGCTCCCCGAGCATACCCGCCCGACCAGC
ACAGCCATGGCCGCAGAGGTGA back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1285192..1294213+ >mRNA_Ecto-sp6_S_contig10.544.1 ID=mRNA_Ecto-sp6_S_contig10.544.1|Name=mRNA_Ecto-sp6_S_contig10.544.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=303bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1285192..1294213+ (Ectocarpus species6 EcLAC_371)
AAACGAGTCTCCAGCTCTTCCGCTAGACAACCCTGTTGCCAGCCAGTACT
GTTTGGCCTGCAGCTGGCCTGTCTCGACCGATGGAACGACCCCAACTGCT
GCGTACTTCAGCAAAATAACCAAAAATCCCCAAGGAGAGCATCAGCCCTG
GAATTTTCGACGGGTTCTTCTGCAGCTCGCTCCTCCTACTGTCAGCGACG
AAACACAAACAGTGCACGGATACTGCTCTTCTTCAAGGTCCACTTCTCAC
AAAGCTCCCCGAGCATACCCGCCCGACCAGCACAGCCATGGCCGCAGAGG
TGA back to top
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