mRNA_Ecto-sp6_S_contig10.513.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.513.1
Unique NamemRNA_Ecto-sp6_S_contig10.513.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A6H5L5K3_9PHAE (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5K3_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 1.450e-176
Identity = 259/269 (96.28%), Postives = 262/269 (97.40%), Query Frame = 1 
Query:   67 MAPNNKAVSAGTHPHGGGGQAFTGQKCPFASLAPQAAS--SGGSNRNPHAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVVTRDKKFL 867
            MAPNNKAVSAGTHPHGGG QA TGQKCPFASL PQAA   SGGSNRNPHAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMW+GDRWTQYALTLFAAGYMVLDACWILCNPSGVKSP+TVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLV+WRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAV TRDKKFL
Sbjct:    1 MAPNNKAVSAGTHPHGGGDQASTGQKCPFASLGPQAARRVSGGSNRNPHAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWKGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPRTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVQWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVATRDKKFL 269
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BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A835Z8V7_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V7_9STRA)

HSP 1 Score: 243 bits (619), Expect = 7.030e-68
Identity = 120/201 (59.70%), Postives = 141/201 (70.15%), Query Frame = 1 
Query:  235 YVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGG--LLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYG 831
            +  G  A++HDDMNL VL GMAL +  AM+  DR  QY LT+FA  YMV DA WILCN   VKSP+TVLGHH ATL+VL+DP + PQHA YT  ALLVE NTFLLI RRR  WG   L+E PF  SWVALRLIWYPFL F++ +C FP  L  +YP  +V WR  +E D  V ++  SY AWVGIC+FQ WWS  L R+YG
Sbjct:   56 WTAGRGAQLHDDMNLVVLLGMALTSMVAMYTRDRALQYGLTVFAVAYMVTDAAWILCNMRAVKSPRTVLGHHAATLAVLIDPYMHPQHALYTCWALLVEANTFLLIARRRFRWGASALVEAPFVASWVALRLIWYPFLAFFWGLCAFPG-LADVYPAAIVRWRLRIEVDL-VRLYPASYAAWVGICVFQLWWSAQLFRNYG 254
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A7S4PA72_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA72_GUITH)

HSP 1 Score: 174 bits (440), Expect = 1.060e-44
Identity = 100/230 (43.48%), Postives = 134/230 (58.26%), Query Frame = 1 
Query:  205 HAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERL---VEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSY----GR--PAVVTRDKKFL 867
            +A   +Q   +    A+ +HD++NL  L  +   A  A+   DR     LT+    Y++LD+ WI   P  VKSP  V  HH+ATL VL+DPLLQP+H  YT+  LLVE NT LL+LRRRVS+  ++EVPF L+WV LR IWYP L FYF +C  P T   L P  L   +E R  +E   PVPM   S L+W  +CIFQ +W+  L  ++    GR  P    ++KK+L
Sbjct:   52 YAERKRQSLSWQPSPASDLHDNVNLIALFLLGGGAIAALALQDRNMHDLLTVSGFVYILLDSVWIFSQPKIVKSPGMVGSHHIATLLVLLDPLLQPKHRVYTSACLLVEINTLLLLLRRRVSYSAIVEVPFILTWVLLRNIWYPLLMFYFFLCFSPSTFIPLLPSSLSWVIEMRTKIELRNPVPMMGVSLLSWAMVCIFQFYWTAQLFSAHPWIWGRRKPTANGKEKKYL 281
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BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A7S0VYL2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYL2_9CRYP)

HSP 1 Score: 170 bits (431), Expect = 1.200e-43
Identity = 86/208 (41.35%), Postives = 126/208 (60.58%), Query Frame = 1 
Query:  250 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSY----GRPAVVTRDKK 861
            A+ +HD  NL VL+ +   + +A+    + +   LT     Y++LD+ W+L  P+ VKSP  V+ HH ATL VL+DPLL P H+ YT+  LLVE NT LL+LRR++S+  L+EVPF +SWV LR +WYP L F+F +C+ P TL  L+P  +VE R  +E    VPM   S ++W  +C+ Q  W+  L   +    GR     R+++
Sbjct:   50 ASELHDSCNLFVLSLLGFGSVYALLTNHQASHRLLTTVGFMYVLLDSAWLLAVPTVVKSPGVVIAHHAATLLVLLDPLLSPSHSVYTSACLLVEINTLLLLLRRKMSYSVLVEVPFIISWVLLRNVWYPLLMFFFILCSAPGTLGPLFPRAMVEARRRIEGPEAVPMRFVSMVSWTAVCVLQLKWTGQLFAQHPWFGGRNKARDRERR 257
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BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A7S2V1S4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.160e-37
Identity = 85/235 (36.17%), Postives = 130/235 (55.32%), Query Frame = 1 
Query:  151 FASLAPQAASSGGSNRNPHAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYA--LTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQP-----QHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGR 834
            F ++ P+  +S  S    H     +K  +     + +HD +NL  L  +A +A   +            +T     Y+ LDA WI   PS +KSP TV  HH++TL++L+ P+           +YTA A++VE NT LL +RR+  +G  +E+PFALSWV +RL+WYP LGFYF +C F    + L P+ ++  R  +E   P P++  S +A+V IC+FQ +WS  LV+S+ R
Sbjct:   10 FDNVGPEKCNSRNSIFQQHVPEKLEKGGWNPSKLSELHDSINLVWLTVLASLAIVVLLSFPTCHSLLVLMTTLTTVYIALDAIWIFMFPSSIKSPVTVCLHHISTLAILLGPIFNAISGSGLQGYYTAAAIIVEANTVLLTMRRKFKFGLWVEIPFALSWVLIRLVWYPILGFYFMVCAFHSVRELLAPQFILHIRETIEGPEPEPLWKLSAMAFVLICMFQIFWSVPLVKSWMR 244
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BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A7S2B6S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6S7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 8.490e-25
Identity = 66/192 (34.38%), Postives = 105/192 (54.69%), Query Frame = 1 
Query:  250 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRS 825
            AA +HD++N+ + + +   AA+++  G       +T  A  Y++ D  W++  P  VKSP  ++ HH+ TL+VL DP+    H  Y +CALLVE NT L+ LRRR+      EV F  +W+ALRLIW+P L ++F   +FPE    + P       F +  +   P+   + + +  I + Q +W+ AL  S
Sbjct:   11 AADLHDNINVVITSLIFFSAAFSL-AGLPPGHTVVTFGATAYIIFDIVWVMSQPRIVKSPVEIILHHLGTLAVLYDPITVLNHQKYASCALLVEVNTVLITLRRRLGRPMWCEVSFLATWLALRLIWFPCLSYWFLCSSFPEVF--VMP-------FGIARENNPPIDTSTTVFFCLIVLLQFYWTFALGSS 192
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BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A812KK43_9DINO (NMA1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812KK43_9DINO)

HSP 1 Score: 111 bits (277), Expect = 3.640e-23
Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 1 
Query:  250 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTL-FAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPET--LKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVVTRDKK 861
            A  +HD +N+A L  +  ++A A+  G+  + + + +   A Y+V DA WI   P  VK+P +V+ HH+ TL V+V+P+    H    + ALLVE NT LL LRR +      E+ F L+W  +RLIW+P LG      TF  T  L AL P         V E RP  +   + L++  + + Q +W+CA+ R   +       +K
Sbjct:   16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWTSPLAALPPPLTA----LVVEVRPPAIRSYASLSFAAVVMLQFYWTCAMGRGMCKSGANKESRK 218
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A812JJT5_9DINO (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812JJT5_9DINO)

HSP 1 Score: 111 bits (278), Expect = 5.880e-21
Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 1 
Query:  250 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTL-FAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPET--LKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVVTRDKK 861
            A  +HD +N+A L  +  ++A A+  G+  + + + +   A Y+V DA WI   P  VK+P +V+ HH+ TL V+V+P+    H    + ALLVE NT LL LRR +      E+ F L+W  +RLIW+P LG      TF  T  L AL P         V E RP  +   + L++  + + Q +W+CA+ R   +       +K
Sbjct:   16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWTSPLAALPPPLTA----LVVEVRPPAIRSYASLSFAAVVLLQFYWTCAMGRGMCKSGANRESRK 218
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BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A813G2R2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G2R2_POLGL)

HSP 1 Score: 100 bits (248), Expect = 1.330e-19
Identity = 64/193 (33.16%), Postives = 103/193 (53.37%), Query Frame = 1 
Query:  250 AARIHDDMNLAVLAGMALMAAWAMWEGDR--WTQYALTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTF--PETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCAL 816
            A  +HD +N+ VL+ + ++A+  +  G+   W   A+ +  A Y+  D  WI  NPS VK+PK +L HH  TL V++D +    H    + AL+VE NT LL LRR +      E+ F L+WV +RL+W+P LG      T+   + L AL   RL    F +  D PV  +  + +++  + + Q +W+  +
Sbjct:   34 AGLVHDWVNIGVLSLVFVLASIGILSGEDSVWHTVAIAVMCA-YLAGDVVWIAVNPSMVKTPKAILAHHAVTLIVIMDTIESASHRANASHALIVEINTVLLTLRRILGRPLWCEIGFYLTWVGIRLVWFPALGAALLASTWGRQDELAALLAPRLPALLFKMP-DPPVRSY--ASISFAVVVVLQFYWTIVI 222
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Match: A0A7S0ASE2_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ASE2_9DINO)

HSP 1 Score: 99.0 bits (245), Expect = 7.410e-19
Identity = 60/191 (31.41%), Postives = 98/191 (51.31%), Query Frame = 1 
Query:  262 HDDMNLAVLAGMALMAAWAMWEG-DRWTQYALTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTF--PETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRS 825
            HD +N+  L  +  MA+ ++W G D      + +F + Y+V D  W+   P+ V++P +++ HHV TL V+   +    H    + ALLVE NT LL LRRR+      E  F  +W  LRL+W+P L       TF   + L+A  P  L+     V+   P P+   + +++  + + Q +W+  L+RS
Sbjct:   28 HDWVNVVTLCLIFAMASASLWSGEDSLGHTMVVVFTSTYLVCDIVWVTLQPAIVRTPGSIVAHHVVTLVVIYGTVENVTHRVNASRALLVEINTVLLTLRRRLGRPVWCEAAFYATWGLLRLVWFPILSVAMLASTFGFADQLRASMPACLL-----VDVRSPPPIKAYASISFAAVVVLQYYWTFTLLRS 213
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5K3_9PHAE1.450e-17696.28TLC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z8V7_9STRA7.030e-6859.70TLC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S4PA72_GUITH1.060e-4443.48Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S0VYL2_9CRYP1.200e-4341.35Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S2V1S4_9STRA1.160e-3736.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2B6S7_9STRA8.490e-2534.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812KK43_9DINO3.640e-2333.82NMA1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A812JJT5_9DINO5.880e-2133.82Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A813G2R2_POLGL1.330e-1933.16Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S0ASE2_9DINO7.410e-1931.41Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:968677..977332 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score560.8
Seed ortholog evalue3.3e-157
Seed eggNOG ortholog2880.D8LSQ8
Model size4473
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs2E7M6@1,2SE6N@2759
Cds size804
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.513.1prot_Ecto-sp6_S_contig10.513.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 968743..973729 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348704.5409675-UTR-Ecto-sp6_S_contig10:968676..9687421682348704.5409675-UTR-Ecto-sp6_S_contig10:968676..968742Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 968677..968742 +
1682348704.5969532-UTR-Ecto-sp6_S_contig10:973729..9773321682348704.5969532-UTR-Ecto-sp6_S_contig10:973729..977332Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 973730..977332 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348704.5512996-CDS-Ecto-sp6_S_contig10:968742..9688551682348704.5512996-CDS-Ecto-sp6_S_contig10:968742..968855Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 968743..968855 +
1682348704.5602584-CDS-Ecto-sp6_S_contig10:971157..9713041682348704.5602584-CDS-Ecto-sp6_S_contig10:971157..971304Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 971158..971304 +
1682348704.569775-CDS-Ecto-sp6_S_contig10:972262..9723771682348704.569775-CDS-Ecto-sp6_S_contig10:972262..972377Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 972263..972377 +
1682348704.578606-CDS-Ecto-sp6_S_contig10:972852..9730401682348704.578606-CDS-Ecto-sp6_S_contig10:972852..973040Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 972853..973040 +
1682348704.5876517-CDS-Ecto-sp6_S_contig10:973488..9737291682348704.5876517-CDS-Ecto-sp6_S_contig10:973488..973729Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 973489..973729 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.513.1

>prot_Ecto-sp6_S_contig10.513.1 ID=prot_Ecto-sp6_S_contig10.513.1|Name=mRNA_Ecto-sp6_S_contig10.513.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=268bp
MAPNNKAVSAGTHPHGGGGQAFTGQKCPFASLAPQAASSGGSNRNPHAVL
TKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYALTLFA
AGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQPQHAFYTAC
ALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCT
FPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCAL
VRSYGRPAVVTRDKKFL*
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mRNA from alignment at Ecto-sp6_S_contig10:968677..977332+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.513.1 ID=mRNA_Ecto-sp6_S_contig10.513.1|Name=mRNA_Ecto-sp6_S_contig10.513.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8656bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:968677..977332+ (Ectocarpus species6 EcLAC_371)
GCGATAGTTGGCTAATTGTCGGGCTCTGTGGTGGGAATCACACACTTGGG
ATCTTCTAGATTCTCTATGGCTCCCAATAACAAGGCCGTATCAGCCGGCA
CGCATCCCCATGGTGGCGGGGGCCAAGCCTTTACGGGGCAGAAGTGCCCC
TTTGCTTCTTTGGCACCGCAGGCGGCAAGGTGAGTGTGCGTGAGCATCGA
CCGCAAGACTTCCGTACGCATACGTAGTTGATGGTTTTAGCCTGCTTTTT
TGACACCCCAACAGCAGCCCGTGCAGTCAACAACACTGAGGGCGGTATGC
TCTGTGCTGTCATGTGAAGGCATAATCACTTATCTTTCGATTACATATAC
AGCAGTAGTGCATATGCATATGTACGTACTGCAGAGCTAGAACGACAAAT
AGCTGCATCTTTGATACACGGCCTTTTGATATACCAGCCCATGCTTAGAG
CCAGCAGCAGCACGGCTCCGTCTGCTCCCGTCACCATGCCTGACGAAACC
AAACGTAGTCTCTCTGATGCGGATTCCGGATATCGAAGGTGCACGAAGCG
TTTTGCTTGCACGTTTCACGGGCTCTTGGTGACGTGACCAGCGTCCCCGT
GGTGCGGACAACCGGAGGTTGAATGTTTTTTGTTCGATCCCGATCCCGCC
CATGGGTTTCAGTAACCTTGCTACATATGCATCCCGCAGAGAAGCCCGAC
AACCTTTCGTGGTTGGGACACCAAACCGCCAGTTCAACAAGCGTGCAAAA
GCTTTGTTTTTCCGGGACCGGCAACAAGCGAGACTACCTCGATGAATATT
TTTTCCGTACGGATCGCTGTTGTGTAACTCCGGAAGGACAACCGCTGCTG
CACATGGGTTTCAAATAAAGTCAGCAGATAGAGCAGGCTGCCGGCATGAT
GCGTCTTCGTGTCGCTATCGCGCACACCCTCCTCGCGGAACCTGTGCGCG
GCAGAGGTCTCTCGACTCCTGCCTTTCCCCTTCTCCCTCCTTGTCCTGCG
AGCTCTTCGTCATTTGTGGTTTCGTGTTCGAACGGAAGGTGCAGCACTTG
TAGACGTTTAGACCGCCTCCGCCCACGCCGTTCTTGAGCCGCTTCTCAAG
ACAATGAGCGGGCGTTCCACGTGCTTGGCGCCCCTTTATTCTGTTCTTTC
TTGTGGAAGTTGTTCTCGCTCGTCGCTTCATCTACACACAAGGGGGGGTG
GAGCCTGATTTTTTTCCAGTCGCCTTCGCAGGCTTGTTGTATTCAGCAAA
CATGTCGGATGAAGCATGCAATCGGGGAAGTTGCGTTGGGTTAGGGAATA
GGGTCTGCGTACCTCGTCCCTGTGCTATTATAGTCAAGAGGGCTCGCTGA
GCCAAATTCTGGTAGCCCAGCTACCCCCCGCCCCCCCGCTTACCCCCACT
ATTTCGGGCGCTTAATCCAGTTTGTTCAAGGCGATTATTGTAAAGGATTT
AGTATAGCTATAAGGTCTACATATTCCTTTTTGTATTAGCCGTTAGTATC
GTACACATAATAAAAAAACTACAACATACCTACATTAAACGTATGGGATT
ATGGGTAATAACCAACACGACAAAAAAGTCTCTGCCCTTCAGTAGGGGTC
CCTCTATAGTGCGGGTATATGCCAAGCGAAATGACCCGCACTACAGCAGT
GGGCACCCGCACTATTGAACAACTTACTTAACCGCTGTCAGTCTTTACTA
CGTATCATATATCATCTTGCGCCAGCCAATTTTCACCCACTCCATATCGG
CAACCCGCGCGATACAGAGAGACCCCGACTGTAGTAGTTACTGCCTACTC
AAAAGACTAAATCCTATAGTATAGGTTATAGTATGCATCACTACCCCCTA
GTTGAAACACCATGTACGGTAGATAACAGCCCCCGTCCCCACCCCCCCCA
CTGATCTGGTCCTTTATCCAGTTTGGGGCAATGCGTCCAAAGTTCGGCTC
CGTGAGCCCCCTTTGCGCTAGTTCCTCGTAGTACTTTATTTCCGGCGATT
TTTTTCCCCCATGGACTGGGTTCACGAAAACAACTCGTCGCTGCAGCCAA
CGGAAGAGGCCGCGTTCTCTCTGTCACGATCCCCGCGTATTTCGCCTGGA
GCCTCTGCTTAGATAGGCTGCAGATGCTGAACAATGTTGCGACTTTCGTG
TCGCTTTACATGGTGCTGGGCCCGGTATATTCGCGTTTCTGCAGAAATCC
AGTAGATCATTTCTTCAGAAATGTATTTCCTGTGGTGTAGTTGGTGCTTG
TTCCGACAAAAACTTGCAGTTTTTCCGCTCAAGCTTTTATCCATCAAACT
CCAGCGCTGCTATTGCTGCTGATGCTGCTGATGCCATTTGTTTGTCACCT
CTTCTGCTGTTGTTTTTTTTATTTTTTCATTGCGGATGGCGATTGCTGAC
CCTCGAAAAACAATCTCCGCGGTTATGTACGATGACGACGGCCATCGGCA
ACATCAACTGCAACTACAACTTCAACAACAGTAGCGGCGGTAGCAATCGG
AATCCCCACGCGGTGCTGACAAAGCAGAAGTCCATGTACGTTGACGGGCT
GGCGGCGCGCATCCACGACGACATGAACCTGGCGGTGCTGGCGGGGATGG
CGCTGATGGCCGCCTGGGCAATGTGGGAGTAAGTTTCCGCATTTGTGCCG
AATGACTTTCGGTCGTTTGATGGGACACCGGAGTCGTATTTCCCCAATGC
CTTTCCGGCATATATTGTTTTTTCTGCCTTTTTGCGGATGTAGTGGAGGT
CTTCTAGGGTAAAGAGAGAGAAGTGCCCCATCGGGACACGTGCGAACGAT
ATGTTTCTGTAGCTGCCGCATCGGTAGCATCATATGTATCTTCGATGCTA
GCCCCCTGCTGCGGCCACGCAGGGGGGTGGACACTGGTGCCGGCGCTTTC
GTCGCGGCACCTGCTCATGTCTTACCTAGGTTAGAGAATCTACTACGCGC
TACCTTGCACGCTGGTGGTGTTGGTTGGTGTGGATATGTCGGATACGGAG
ACTGATCATGTTGAGCTTCGTTGGTTGGTGGTACACAGAGAAGTCAACGC
GTGCCATGATGTCTGCGACTAGTTGTACGGTAATCCTAGCTTGGCCACCT
GTCAGATCTCGATGTCTATGTGTTACCGCTGTTCTGCAGCGGGGTGAGGT
ATCAGCATCATCTGCTCAGTCCAGACAGTTCAGGATGATTCGTTGGCGAG
TAGTTTCACGAATTACTTCACTTCAAGCAGCAGCAACAGAGTAGCCGCAG
TTTTTTTGTCAGCGTTGAACAACATTGAGGGATAATTGGAGGTTTACCTT
GCACCACCAAAAACGGCAGCGCACGAGCAATAACGAGTGTATGAAAATTC
TAGCTGCCTTCCACGTCTCGTATCACCCCCCTCCTCGCCGCCCGACCTGC
CCGCCGCCCGCAACGGAGAACCATCGTTGTGCTTCAGAGTACCATTTGTC
GTGAAGAAAGATATTTGAGAAAACGACAAGCCCCCTCACAACACCCTTCG
TGCCCTTTTCCCGTTCTCCTTCCTCAACGGCTATGCACCCGTCGACTTTT
TTTTCGTTTTGCCCTGGTGTTCCGTGTGTGGAGCAGGGGGGACAGGTGGA
CCCAGTACGCGCTGACGTTATTCGCGGCGGGTTACATGGTGCTGGACGCG
TGCTGGATCTTGTGCAACCCCTCGGGCGTCAAGTCGCCAAAAACTGTACT
TGTGAGTAATGCGGAGGCGAGAGCGAGTGGACGGGCGGGTAATTCGCTTT
CATGTCGGGCCGTGGGTCGCCAACCATGGGTGGAGGGCTGAGAGACAGAA
ACCGATAAAAGGGCAGGAGGGGGACGATACGACGATGGAGACGAAAAAGA
TAGCGAGAGAAATGAGGAGAGCTGGGGATCCTCCGTCGTATCCTCGGGAG
AAGCCGTATTGTAGCCCCGCCCAGAGGAGGCGCACGAGCCACTGGGTCCC
TGCAATTTTGCGTAAAATCATGACCCTCTTTTCGTTCGCAGCCTCTCGTA
CCCTCCCTCCGGACACGGTCTGAACCTCTTTCCCTAGAGAGAAATGTGTG
GCGGCCGGTAACACCCGTTTTGATGGTGGGTCAGGCCCCGCACCCAAACC
CTTGTTGTGATTCGTATCCCGACCATTGACGCCCGCGGCCCGGGCAACGT
CACGCGGCTCCGTGCACGTTTTATAGGGTCACCACGTGGCCACCCTCTCG
GTGCTGGTGGACCCCCTGCTCCAGCCGCAGCACGCCTTCTACACGGCGTG
CGCGCTGCTGGTGGAGTTCAACACGTTCCTCCTCATCCTGCGGCGTCGGG
TGTCGTGGGGAGGTCTCCTGGAGGTGCCCTTCGCGTTGTCGTGGGTGGCG
CTCAGATTAATTTGGTGAGCGAGCAGGGACGACAGCAGGTTGTTGTGTGA
CCAAATCAAAGACGTTGGCTCTTAGCAACGGATAGATCTATCTGAACGGA
CCTGCGTGCGATGAGGCGGAGTTGACCTTCGTCAGAGAGGTGCATTGCTG
CTCTTGGCGCTACCACTCTCATGACTAATGGTCCCATCGAAGGAATAATA
AATGTACGAAGAAAATGCAAACTTGAACGCAGGGACCTGCCACGAGAACA
GGCCTTCCCGCCTCCCCCGGTTTCTCGACCTCGGTGCACGCTATGCTGGT
CCGTCCTCCGGCGCATTCATTGTTAGTTGGTGCTAAGAAGGGTCATTCAG
GGTAGAAGAGAGTTCGCTTCCTAGCGGTCTGGCAGCTGTGGCATGCATGA
CTCATGACAACACCCTCCTTTTCTGTGCCTCCTCTACCCACTGCTCGCTA
CCGTTGTCGCAGGTATCCGTTCCTCGGCTTTTATTTCACAATGTGCACGT
TCCCGGAGACCCTGAAGGCCCTCTACCCCGAGCGGCTTGTGGAGTGGAGG
TTCGCTGTGGAGGAAGATCGGCCGGTTCCCATGTTCCTCGGCAGCTACCT
CGCGTGGGTGGGGATCTGCATCTTCCAAGGCTGGTGGTCGTGCGCGCTCG
TGAGGAGCTACGGCCGCCCTGCCGTCGTGACACGAGACAAAAAATTCCTG
TGACGATTTTGCGGTGTTTGGCCGGCTGGTCGCAAAATTATCAGAAGGTG
GCGGGGGCGGGGTAGTGAGGCAGGAGTATGGCGGTTCGGCGAGCGCGGGC
GAAGATGAGCTAGCCCCCCCGCTACTGGGCCTGACTGAGAGTCTTGATGG
CCGCCACGCGAAGGATGAATGTGTCCGTGATGAATGTTAGTTGTAAGCAC
GGGTGATGTTGGTGTTTTTTTTGTTTGTTTTTTTACGAATTCGGTGTGAC
GTCTGCGCGGTGATGCTCGAAGCTCTCTGATCAAGAACAGACCGACCCCG
ATAGAGCGTTTGTTGCTTGGTTGGTGGAACCCGTACAATCCGGTTGTTTG
TGGCTTTGGCCATCGCAGTGCGACGATGCCGTGGCGATGACGGCGGTAGC
GTAGCGACGTTTCGTATTAGTGGTGATGCGTGGGGCCTTGTAGATATTTG
CGTTAATTTAGTGGGAGGTCCGCGTCTTAGGGATGCAACTGTGGGGGGGG
GGGGACTACCAGGACGTGTTTGGCCTCGGGTGCACGTCCCCCTTTTCGGT
TCCTCAATGTATGCTAGCACCGACACCTTGTGTCCTCGTGACCGTTCTTA
TTCGGGGTCAGGGGGTTTGCCTGACATGGGAAATGCACCCAGAGCTTCAG
ATTTCCGGGGACGTTGGGGGGACGGGACTTGGCTGAACCTGCGGATTGAT
TTTTGTCGGCGACGGTGAAGAGTTCCACCCGCCAGGAACAACCTTCCTTT
TTTGCCGCCGTTCCCGTCGGCGATATATGGGTACCCTAGCGCGTCTTGAG
AAGCTTCACAAGAGCCCATGTCCACATGATCGAAGTGAAGCTTTTCTCGG
CTTGTTTGGCCTCGGACGAGACCTCTGCACTGAGGCGGAGCGTGGCAGAT
GTGACGGCCCTTGACTGGAAGCACACCTCATGTTAGCAATCGGTGGCATT
CCTTGTGTCTACACAGAAGCTCAGCACACTCAGGCCCAGAGTATGGGTAC
CAGTCCTTGCGTCTTTTGATGTTGCTTGCTGTGATACAGATTTTGTTTTG
TCACACCACGTTGTTTCTTTGAATGTGTGCCGTCTACGCCAGGCTGGCCG
AGGGGTAGTGAAATGGGGGAGTTAGAGCTACACGGGAGTGGTTTCCTGTT
CCGCACAACCATGCTTTGTTAGTTGGGTGTGAGAACCGAGACGCGTGCGC
GTGACCTTACCGCGAAGGCACGTGTACGAAGTTGGATCACGTCTTGTTAC
CAGCGCGCTCCTCGCAGGTAGTTCAATAGCGAGGCGCTTGGTTCAGGGAC
GGCAAGTATTTCGCAAAGTAAATCTTATAGAGTACTCGCGTATCATGGAT
GCTTCTTCGCGGTGTTGCAAACGTCGGTTTTCCTCGCCGGCCCGGGGGAA
AGCATACTGTTCTGAACGTCTAATCGGTTGTGTCATGTCACAAGCGGTAC
AAGTGAAGTGATCTTAGCGGTTAGCTTCGCCCTCGTAAAAATGTGTGCAC
AAAAGATAAAATTGCTGTCCTTTGCCAGATATTCGGAGACTTTCAAATAC
GTGTCATCTGTGTGTAGACCCATTCTTTCGCATGCAGCCCATACGGTTAG
TTGTCATCCGGGTGTGTAAAACAACAGGATTTCATCATGAGATCAGGTGG
GAAAGGGAGGGTTGGAGCGCTAGGGGACATGTTATTTTGTGCTTATGGAG
GCCCCCTATAATAGTACGGTGGGTCACGAACAAATTGATAGATGCACCAT
TTGAGCCAGTTTTTTGTAGGATCGAAAGTGCCACCACCGAATGTGGCAAC
GACTTCCATTAACCAAATCGGGTGTTGAAAGGCGCCGTTCGCCTTGCCGG
CGGCTGTACCGTCGATATATACTTCTTGTCGATGTATACTTCTGAAGTAT
TTATGTGAATGCCGCATGCTTTGTCGCAAGCCGGCACAGGCATCGAGCAG
GTCAGCGCGCGCACGATCGCGTTGCGGGCATGTGCACGAGTAGACGATAT
GATTTTTCACGTCAATTTATGCATACGGGCAGACAGACTGTTCTTGCTTC
TTCCGCTACTACCATCAGTTCCACATTTCAAACCACGCGCGATATCGAGC
ACACGCAACGGCAGGGAGATTATCTTCTGCGTCACCCCTGGCCGGCAAGC
GGAAGGCGGTTGTACGTACACCTGTCGCGCACGTTTAATCAAGCGGCCTT
GATGAACCGCACTCGCGGCAGCGGTGGTTCTATTGAGTCCGATTTACCGT
ACCACACACCCGAAACTACGACTCACTCCCGCTCTCTGCTTTACAGCAAA
CCCAACACTTAAGAAACTGTTCTGTAAGACTGTTCTGTACATACCGTGGA
AGCGGCTCATGCAATGCTTTCCCCCTGCAGCACACAAGTTAAAAATGGGT
TGGGCAGGAACCGAATGGACAACTCATGAACTTGTTTTACCGGAACAAGC
TCGTCCTTTGACGTTTTGTCCCAACCATCAGGTTACGCCTATTTGACCAC
ACGTACTCCCCGGCGACTGCCCACACGAATCTCGTAACCACCCACAAGAA
ACTGGGTGGTGTTATTACTCGGAGGTGCGAAAGCACTACAGCCATGCGAC
GTTGCGAAGATAGTGGTGGTGGACGTGGGCCCGAACGTCCTTTACGTTAC
TGCCTCATCGCCAACGGTCAACACTAGGCTGCACCCTGCACACCTCCACG
CCCGGCCCTGGCGGCAGAGAAGCAGGCGAACATCAGCCGCCGTGGAGAGG
CCAACGGCCAACACGAGGCTGCACCCTGCACACCTCCACGCCCGGCACTG
CCGGCAGCACATCGTCAGAGTAGCAAACAAACGTCAGCTGTCGTAGAGAG
GCAGGCCACGAAAAGTCGCCCGCTGGAATCGGGAAAGCTTGGCCGAACCT
CAGATACTGCAGTGACTTGGGCCAGGCTACGCCGTGGATGGATTTTCTGA
AGTCTTGGCCAAACGTCAGCTTGCGCAACGATGCAGGCCAAGCTGCACAG
ACGTCGACGGGTTGGTTGAACATGTGGCTGAAAACCAGCTCCTGGAGAGA
AGGGGGCCACCGAACGCCAGCGATGGGTTGGTTGAAGCGACCGCCTAGAA
CCAACTTCTTCAGGGCCACGGGCCATACCACCGCGAGGAGACCTTGGTTG
AAGTTCCACCCTAGGGTGAGTTGCTGTAGCGATGACGGCCATTTTACCCT
GTCGAGTGCCTCGTCGAAGTGTTGGCCAAATGTTAGTTCCTCCAAGAATG
TTGGGAAGCTAACGCGGTCGATGCACTTGTTGAATTTGGACCCGAGTACA
ATCACTTTCACCGATAGCGGCCACGTAATTTGATCGATTTGCTGGTCGAA
GCTGCTGCCGGTGACGAGCTGCTGGAGCGAAGCCGGCCATACCATTCTGT
CAAGCCCCTTGTTGAAACCACCGCCGAAGGAGAGTTTCTTCAATGAAGCT
GGCCACTTTGCCTCGTCAACCGAATGATCGAATGACCACCCGAAGGCTAA
TTCCTGGAGAGAGGTCGGCCACGCCACAGCGTCGACTCTCTGGTTAAACA
GGAGGCCGAAGCTCAAGACGCGCAGATCTGGCGGCCACGAAACGCCATGG
AGCGGT
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:968677..977332+

>mRNA_Ecto-sp6_S_contig10.513.1 ID=mRNA_Ecto-sp6_S_contig10.513.1|Name=mRNA_Ecto-sp6_S_contig10.513.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=804bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:968677..977332+ (Ectocarpus species6 EcLAC_371)
ATGGCTCCCAATAACAAGGCCGTATCAGCCGGCACGCATCCCCATGGTGG
CGGGGGCCAAGCCTTTACGGGGCAGAAGTGCCCCTTTGCTTCTTTGGCAC
CGCAGGCGGCAAGTAGCGGCGGTAGCAATCGGAATCCCCACGCGGTGCTG
ACAAAGCAGAAGTCCATGTACGTTGACGGGCTGGCGGCGCGCATCCACGA
CGACATGAACCTGGCGGTGCTGGCGGGGATGGCGCTGATGGCCGCCTGGG
CAATGTGGGAGGGGGACAGGTGGACCCAGTACGCGCTGACGTTATTCGCG
GCGGGTTACATGGTGCTGGACGCGTGCTGGATCTTGTGCAACCCCTCGGG
CGTCAAGTCGCCAAAAACTGTACTTGGTCACCACGTGGCCACCCTCTCGG
TGCTGGTGGACCCCCTGCTCCAGCCGCAGCACGCCTTCTACACGGCGTGC
GCGCTGCTGGTGGAGTTCAACACGTTCCTCCTCATCCTGCGGCGTCGGGT
GTCGTGGGGAGGTCTCCTGGAGGTGCCCTTCGCGTTGTCGTGGGTGGCGC
TCAGATTAATTTGGTATCCGTTCCTCGGCTTTTATTTCACAATGTGCACG
TTCCCGGAGACCCTGAAGGCCCTCTACCCCGAGCGGCTTGTGGAGTGGAG
GTTCGCTGTGGAGGAAGATCGGCCGGTTCCCATGTTCCTCGGCAGCTACC
TCGCGTGGGTGGGGATCTGCATCTTCCAAGGCTGGTGGTCGTGCGCGCTC
GTGAGGAGCTACGGCCGCCCTGCCGTCGTGACACGAGACAAAAAATTCCT
GTGA
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