Homology
BLAST of mRNA_Ecto-sp6_S_contig10.414.1 vs. uniprot
Match:
D7G939_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI)
HSP 1 Score: 338 bits (868), Expect = 2.560e-112
Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 1
Query: 1 CWYFDAGPGGLAIESSKTRHLATVPLPRSSFPPPAEGDNAEDKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCLA 495
CWYFDAGPGGLAIESSKTRHLATVPLPRSSF PPAEG+NA DKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCLA
Sbjct: 390 CWYFDAGPGGLAIESSKTRHLATVPLPRSSFSPPAEGENAADKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCLA 554
BLAST of mRNA_Ecto-sp6_S_contig10.414.1 vs. uniprot
Match:
A0A6H5JG89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE)
HSP 1 Score: 327 bits (837), Expect = 1.340e-106
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 1
Query: 1 CWYFDAGPGGLAIESSKTRHLATVPLPRSSFPPPAEGDNAEDKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCLA 495
CWYFDAGP GLAIESSKTRHLATVPL R+SF P A+G+NA DKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCLA
Sbjct: 479 CWYFDAGPRGLAIESSKTRHLATVPLSRASFSPSAKGENAADKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCLA 643
BLAST of mRNA_Ecto-sp6_S_contig10.414.1 vs. uniprot
Match:
A9VA94_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VA94_MONBE)
HSP 1 Score: 56.6 bits (135), Expect = 2.390e-6
Identity = 33/123 (26.83%), Postives = 56/123 (45.53%), Query Frame = 1
Query: 133 DSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFST-----------GRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHF 468
+ L +H+L P+ L A +++ + L + P +VFS V+++ RQ + P + GFPEVSGE+I T +H++TA I + WRD V + + +
Sbjct: 267 EELTLHILPDAPVHTLAVEYFRTTATGAIVVVQRIIDLLYQHVLPFNLVFSRYYVNAGISPSRSTVYIVLRQRMHPFPGINI-GFPEVSGELICTSSSIYHSVTAHNISQHWRDNVRLSGDRY 388
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.414.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 2.56e-112 / Id = 98.18 Expect = 1.34e-106 / Id = 95.15 Expect = 2.39e-6 / Id = 26.83 Sequence D7G939_ECTSI A0A6H5JG89_9PHAE A9VA94_MONBE
Match Name E-value Identity Description
D7G939_ECTSI 2.560e-112 98.18 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG89_9PHAE 1.340e-106 95.15 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A9VA94_MONBE 2.390e-6 26.83 Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Stop 1
Start 0
Seed ortholog score 344.4
Seed ortholog evalue 3e-92
Seed eggNOG ortholog 2880.D7G939
Preferred name GDPGP1
Model size 498
KEGG rclass RC00002
KEGG ko ko:K14190,ko:K15630
KEGG Reaction R07678
KEGG Pathway ko00053,ko01100,ko01110,map00053,map01100,map01110
KEGG Module M00114
Hectar predicted targeting category other localisation
GOs GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006950,GO:0006952,GO:0006979,GO:0008150,GO:0008152,GO:0008194,GO:0008905,GO:0008928,GO:0009058,GO:0009108,GO:0009110,GO:0009266,GO:0009408,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009719,GO:0009725,GO:0009753,GO:0009987,GO:0010033,GO:0010035,GO:0010193,GO:0010471,GO:0010472,GO:0010473,GO:0010474,GO:0010475,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016757,GO:0016758,GO:0016772,GO:0016779,GO:0019318,GO:0019752,GO:0019852,GO:0019853,GO:0033036,GO:0033037,GO:0033554,GO:0035251,GO:0042221,GO:0042364,GO:0042493,GO:0042545,GO:0042742,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045229,GO:0046364,GO:0046394,GO:0046527,GO:0046677,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0052386,GO:0052482,GO:0052542,GO:0052543,GO:0052544,GO:0052545,GO:0070568,GO:0070727,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0080046,GO:0080048,GO:0098542,GO:1901576,GO:1901700
Exons 3
EggNOG free text desc. GDP-D-glucose phosphorylase activity
EggNOG OGs KOG2720@1,KOG2720@2759
EC 2.7.7.69,2.7.7.78
Cds size 498
COG Functional cat. S
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko01000
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348694.02225-CDS-Ecto-sp6_S_contig10:11606..11732 1682348694.02225-CDS-Ecto-sp6_S_contig10:11606..11732 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 11607..11732 -
1682348694.0337932-CDS-Ecto-sp6_S_contig10:12283..12475 1682348694.0337932-CDS-Ecto-sp6_S_contig10:12283..12475 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 12284..12475 -
1682348694.0425725-CDS-Ecto-sp6_S_contig10:13631..13811 1682348694.0425725-CDS-Ecto-sp6_S_contig10:13631..13811 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 13632..13811 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.414.1
>prot_Ecto-sp6_S_contig10.414.1 ID=prot_Ecto-sp6_S_contig10.414.1|Name=mRNA_Ecto-sp6_S_contig10.414.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=166bp
CWYFDAGPGGLAIESSKTRHLATVPLPRSSFPPPAEGDNAEDKEDSLEVH VLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVF VLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVA VDSEHFDRITDGCLA* back to top mRNA from alignment at Ecto-sp6_S_contig10:11607..13811-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.414.1 ID=mRNA_Ecto-sp6_S_contig10.414.1|Name=mRNA_Ecto-sp6_S_contig10.414.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2205bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:11607..13811- (Ectocarpus species6 EcLAC_371)TGCTGGTACTTTGATGCTGGGCCGGGTGGTCTTGCGATCGAGTCTTCCAA
GACGAGGCACCTTGCAACGGTACCTCTTCCACGCTCCTCCTTCCCCCCCC
CCGCGGAGGGCGACAACGCGGAGGACAAGGAAGACAGCCTTGAGGTTCAC
GTTCTACAAGGATACCCGATCAGGGCACTG GTGAGAGTCGAGACGAGGGC
AGGGCGCGCTGAATATTTCCCACGCACGGTAGCCGTAGGTCATGTCGGGG
TAGGGGAGGAGGTGCGGGCAAGGTCCCCAGGAAAGTACGCGCGGCAGCTA
TAGTGTAGGCGAGTGGCGGGGGGTGTATGGATGGGCGACCGATACTGCTG
AAGGCACGTGGGTTTAGGGGGTGAATACGGCGGAGTGTTAGTCCTAGCGT
TGATGAGTCGTACATAACGAGCTTGAACAATCAACAAAGAAATGGGTTCC
TTCGGGAGGGGTGTGGGCGGATTACGGCCGCCTTTTTTTGCTGTTGTATG
TTTTCTGTTTTTTTGTTTTTGTTTTTGTTTGCGTTCACGGTGTGTGTTGG
CTATTGGTAGTTGCTTTTATCGAGTACGGCTGTGCCGTAACGAGAATTAT
CGTACACATGGGAACAAATAAACACGTTTTCTTTTCGGCAAGGGTTCGTG
CAATCGGCTCGGAGAAAATCGTCTTTCTCGCTACCTTGCGGACAGCCTGC
CCCACAGTGCCTGGTGGGTAATAGGGGGTGGTGGTTCAGTATAACGGGTA
GAGGATATCCGATCTCGTGAAGCTTTCGCATGAACGTTGGGTGTTTGTCT
TTGAACGCTGTCTTTCGCCCAAACCGCTGCACGGACCCGTGGTGTGGTCG
AAACACCGAGCACGAGTTTGGTGTACCCGGTTACGTGCACTTTCCCAGGC
AAACTAATCGCCATATGCATCAGACGAGCGGTAGCCGAAAGGAAACCTAC
TTGTGCTCGCTACGCAACGTACCGAATAACACTAGGTATGCCTGAGGGTG
TCTTTATACGACAATGTGGCCACCGCCTCAGTGACCTACTTCCCTTCCAT
GTATTCCAGATTGGACGAAGCACGCTGATGTGTTTCAAAATGAGCAATGG
CCTGAGGCCCTAGAGATACATCCGTGCTGTTCCTTTAAGGACAACACACC
GGATAGGACGAAGGGAATGATCGGAAAGTGTTGTTACCAGTCGAAGCAAT
GACCCAAGTAGGCACACGGGTCCTCGCCGTTCGTTCACATGGCAGTACTT
ACAGCAGGAGTGGCCGGAACAGTCACAAACTTCTCCATGTCGGCAAATGG
CATGGTGTAAGTAACGTCTGCACCCACATCCTCCAGGTGTTCCACACGCT
GGGGAAGGATCTGGAGGCCGCAGGCGAGGCGATCGAGAAGTGCGTCAGCT
TCCTCGTCGAGGAGAACACGCCGCACACCGTGGTCTTCAGCACGGGGAGG
GTCTTCGTGCTCCCTCGACAGCACCTCGAGGAGCCGCCGTTCGCCGTGGT
TCCGGGCTTTCCCGAGGTCTCGGGCGAG GTGAGCTCACACAGCGGGGAGA
CAGACTTACGCGTGTCTTGCGGTATTGCACTGCTGCAAGAACGGACACGG
CGTTGGTGCTAATGGAAGAGGTGTAATGGGGAGGGGGTCGGGTGATATGC
GGCAGCGTTAGGGGGGGAAGAACGGGAAGAGGAGCGGGAAGGCGGCTATG
TGAGGAGGACTGATGTGTTGAAATTTTGCTCCGCTGTTTCTTTGAAACTG
GTCGTCTTGGTGATTGTATGTGTGCGAGCTGACGACTTCTTGCCGTTTCC
GGGTGTTGAAAGAAATTGGTTCTTGGATGTTGTCGTTATTATTGTTTGCT
TGCTCATGAATACCTCCTTCGGAGCTCTCCCCTGTACATATTCCCCGTAT
TCTGCGCTAGTCCAACAGGGTGATACAGGTTTCCCTGGCCGTGAGCTTCC
CCAGAACGAGGCACATGCGTTTGCTTGGCATGACAGGTTGAGGTAAGGCC
CCACCGTCGTATGTGGATTGATTCACTGAGCCCCCACCCCGCCGTGTGTG
TGCGTGCCGTGTGTGGCCGACAAACAAAGGTCATCGTCACGAGGGAAGAT
GATTTCCACACGATCACCGCCGACCAGATTTACGAGTGGTGGCGCGACAA
GGTGGCGGTCGACTCCGAGCACTTCGACCGCATCACCGATGGATGCCTTG
CGTAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:11607..13811-
>mRNA_Ecto-sp6_S_contig10.414.1 ID=mRNA_Ecto-sp6_S_contig10.414.1|Name=mRNA_Ecto-sp6_S_contig10.414.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=498bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:11607..13811- (Ectocarpus species6 EcLAC_371) TGCTGGTACTTTGATGCTGGGCCGGGTGGTCTTGCGATCGAGTCTTCCAA GACGAGGCACCTTGCAACGGTACCTCTTCCACGCTCCTCCTTCCCCCCCC CCGCGGAGGGCGACAACGCGGAGGACAAGGAAGACAGCCTTGAGGTTCAC GTTCTACAAGGATACCCGATCAGGGCACTGGTGTTCCACACGCTGGGGAA GGATCTGGAGGCCGCAGGCGAGGCGATCGAGAAGTGCGTCAGCTTCCTCG TCGAGGAGAACACGCCGCACACCGTGGTCTTCAGCACGGGGAGGGTCTTC GTGCTCCCTCGACAGCACCTCGAGGAGCCGCCGTTCGCCGTGGTTCCGGG CTTTCCCGAGGTCTCGGGCGAGGTCATCGTCACGAGGGAAGATGATTTCC ACACGATCACCGCCGACCAGATTTACGAGTGGTGGCGCGACAAGGTGGCG GTCGACTCCGAGCACTTCGACCGCATCACCGATGGATGCCTTGCGTAG back to top