mRNA_Ecto-sp13_S_contig17008.4998.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17008.4998.1
Unique NamemRNA_Ecto-sp13_S_contig17008.4998.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: A0A6H5JDY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDY8_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 4.370e-158
Identity = 258/306 (84.31%), Postives = 267/306 (87.25%), Query Frame = 1 
Query:   22 DMELGGIHGHFRAEGDEGGARQGLVGGGXXXXXXXXXGEVLPKRGAGR-----------GDHREDPXXXXXXXXXXXXALVNGXXXGRTSARPTAASFNAKGPLAAWLDSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            +MELGG+HG+ RA+G+EG ARQG+VGGG XXXXXXXX   LPK GAGR           GDH +DP      XXXXX ALVNG   GRTS RPTA SFNAKGPLAAWLDSLSPSLKF ILVSCVMVSFGLHNILQASA+  +    ESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGE GKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV
Sbjct:   17 NMELGGMHGYLRADGEEGRARQGVVGGGGXXXXXXXXXRALPKSGAGRSAAGGDGEELRGDHLDDPLRREAGXXXXXVALVNGSGGGRTSVRPTATSFNAKGPLAAWLDSLSPSLKFTILVSCVMVSFGLHNILQASARSMQ----ESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEGGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 318
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: D7FWE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE3_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 2.690e-139
Identity = 249/311 (80.06%), Postives = 255/311 (81.99%), Query Frame = 1 
Query:    1 PRVRVDADMELGGIHGHFRAEGDEGGARQGLVGGGXXXXXXXXXGEVLPKRGAGRGDHREDPXXXXXXXXXXXX---------ALVNGXXXGRTSARPTAASFNAKGPLAAWLDSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            P     ADMELGG+HG+ RAEG+EGGARQGL+G  XXXXXXXXX                  XXXXXXXXXXXX         ALVNG   GRT ARP  ASFNAKGPLAAWLDSLSPSLKFAILV+CVM+SFGLHNILQ           ESL  MEGFNFGWSLGLLEAIGVLVGSM ERVHGGE GKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV
Sbjct:    2 PSAEEGADMELGGMHGNLRAEGEEGGARQGLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALVNGTGGGRTGARPAVASFNAKGPLAAWLDSLSPSLKFAILVTCVMMSFGLHNILQ-----------ESLFQMEGFNFGWSLGLLEAIGVLVGSMAERVHGGEGGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 301
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: A0A448ZJK1_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJK1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.980e-53
Identity = 100/200 (50.00%), Postives = 130/200 (65.00%), Query Frame = 1 
Query:  307 WLDSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            W D+L+P  +F+IL   V + FG+HN LQ           E+++ + GFNFG  LG LE +GV + S  ER       +RVAP  +Y +L   L  SSSLSN++LNYI +PTKV+FRSCKLIPTM +A +  K+  S  E+  AF +CAGLV+F  AD  L P F P G+A V+LSVCADA LPN QE +F MG+SR+EV
Sbjct:   47 WFDALAPPAQFSILACGVFLFFGVHNYLQ-----------EAIMSVPGFNFGVMLGYLEVLGVTICSFLERRCVARETQRVAPISAYPLLTICLLSSSSLSNLSLNYINFPTKVVFRSCKLIPTMVVASIVHKRTFSVLEYGCAFCICAGLVLFAAADWSLAPSFHPIGLAFVILSVCADAVLPNAQERLFGMGSSRLEV 235
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: A0A1Z5KIZ6_FISSO (Solute carrier family 35 (Adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIZ6_FISSO)

HSP 1 Score: 183 bits (465), Expect = 5.190e-52
Identity = 96/198 (48.48%), Postives = 131/198 (66.16%), Query Frame = 1 
Query:  313 DSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            + +S + +FAIL S V V FG+HN LQ           E+++++ G+N+G  LG  E +GV V S +ER +  +   R AP  +Y +L G L  SS+LSN++LN+I +PTKV+FRSCKLIPTM IA +W  KI S  E++ AF++C GLV+F  AD +L P F P G+  V LSVCADA LPN QE +F  G+SR+EV
Sbjct:   24 EMMSSNTQFAILGSAVFVFFGIHNYLQ-----------EAIMNVPGWNYGVMLGFFEVLGVTVCSFWERHYIRKEYGRAAPISAYPLLTGCLLASSALSNLSLNFINFPTKVVFRSCKLIPTMIIASIWHAKIFSSVEYICAFAICVGLVLFAAADWELAPSFHPIGLLFVTLSVCADAVLPNAQERLFQAGSSRLEV 210
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: A0A1E7FGG3_9STRA (UAA transporter (Fragment) n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGG3_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.860e-51
Identity = 98/198 (49.49%), Postives = 127/198 (64.14%), Query Frame = 1 
Query:  313 DSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            + LS  ++F++LV  V   FG+HN LQ           E+++ + GF FG  LG LE +GV V S  ER    +  +R+AP  +Y +L   L  SSSLSN+ALNYI +PTKV+FRSCKLIPTM +A +  KKI S  E+  AF +C GLV+F  AD  L P F P G+A V LSVCADA LPN QE +F +G+SR+EV
Sbjct:    1 EKLSSPIQFSLLVCGVFFFFGIHNYLQ-----------EAIMSIPGFRFGVMLGYLEVLGVTVCSFLERRCIAQETQRIAPLSAYPLLTFCLLSSSSLSNLALNYINFPTKVVFRSCKLIPTMIVASIVHKKIFSSVEYFCAFCICFGLVLFAAADWTLTPSFHPIGLAFVSLSVCADAVLPNAQERLFRLGSSRLEV 187
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: A0A7S2EPC4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EPC4_TRICV)

HSP 1 Score: 184 bits (466), Expect = 3.690e-51
Identity = 98/208 (47.12%), Postives = 133/208 (63.94%), Query Frame = 1 
Query:  283 NAKGPLAAWLDSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            N   P  ++ +SL  + +FA+L   + + FG HN+LQ           E+++ + GF++G  LG +E +GV + S  ER +  +   RVAP  SY +L   L  SS LSNM+LNYI +PTKV+FRSCKL+PTM +A +  KK+    E+ +A SVCAGLV+F  AD KL P F P G+ MV LSVCADA LPN QE +FS G+SR+EV
Sbjct:   95 NGSCPGGSFFESLPKTQQFALLTMGMFLFFGAHNVLQ-----------EAIMKIPGFSYGVMLGYMEVVGVTICSYLERKYIAKEQGRVAPLSSYPLLTFCLMASSGLSNMSLNYINFPTKVVFRSCKLLPTMLMATVINKKVFKSSEYFSALSVCAGLVMFAAADWKLTPSFSPVGLVMVSLSVCADAILPNAQERLFSQGSSRLEV 291
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: B7G8T2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8T2_PHATC)

HSP 1 Score: 182 bits (463), Expect = 4.610e-51
Identity = 99/200 (49.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:  313 DSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFER--VHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            +     L+FA+L   V + FGLHN LQ           E+++++EGF+ G  LG  E +GV V S  ER  +   E  +RVAP  +Y +L   L  SS+LSN++LNYI +PTKV+FRSCKL+PTMAIA +  +KI S  E+  AF+VCAGLV+F  AD +L P F P G+ +V LSVCADA LPN QE +F +GASR+EV
Sbjct:   54 EEFPSKLQFAVLACAVFLFFGLHNFLQ-----------EAIMNVEGFHRGVMLGYTEVLGVAVCSYLERKFLQNKEEVERVAPLSAYPLLTACLMTSSALSNISLNYINFPTKVVFRSCKLLPTMAIASIIHRKIFSATEYSCAFAVCAGLVLFAAADWELAPSFHPIGLVLVTLSVCADAILPNAQERIFRLGASRLEV 242
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BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: A0A7S4J105_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J105_9STRA)

HSP 1 Score: 176 bits (447), Expect = 5.550e-49
Identity = 93/198 (46.97%), Postives = 132/198 (66.67%), Query Frame = 1 
Query:  313 DSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            +SL  S +FA+L   + + FG HN+LQ           E+++ + GF++G  LG LE +GV V S  ER +  +   RVAP  SY +L   L +SS +SNM+LNYI +PTKV+FRSCKL+PTM +A +  KK+    E+L+A +VCAGL++F  AD +L P F+P G+ +V LSVCAD+ LPN+QE +F  G+SR+EV
Sbjct:   37 ESLPASQQFALLSLGMFLFFGAHNVLQ-----------EAIMKIPGFSYGVMLGYLEVLGVTVCSFLERKYVAKESGRVAPLSSYPLLTLCLLVSSGMSNMSLNYINFPTKVVFRSCKLLPTMLMATVINKKVFQSSEYLSAIAVCAGLIMFTAADWQLTPSFNPFGLILVTLSVCADSVLPNVQEKLFRQGSSRLEV 223
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: A0A7R9W0D0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0D0_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.020e-48
Identity = 91/204 (44.61%), Postives = 133/204 (65.20%), Query Frame = 1 
Query:  295 PLAAWLDSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            P + + +SL    +FA+L   + + FG HN+LQ           E+++ + GF++G  LG +E +GV   S  ER    +   RVAP  SY +L   L +SS +SNM+LNYI +PTKV+FRSCKL+PTM +A +  KK+    E+L+A +VC+GL++F  AD +L P F+P G+ +V LSVCADA LPN+QE +F+ G+SR+EV
Sbjct:   44 PGSGFFESLPAPQQFALLALGMFLFFGAHNVLQ-----------EAIMKVPGFSYGVMLGYMEVLGVTTCSFLERKFIAKEKGRVAPMSSYPLLTLCLLVSSGMSNMSLNYINFPTKVVFRSCKLLPTMLMATIINKKVFLSSEYLSAIAVCSGLILFTAADWQLTPSFNPFGLILVSLSVCADAVLPNVQEKLFNKGSSRLEV 236
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Match: W7U2S7_9STRA (Udp-galactose transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2S7_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.480e-48
Identity = 97/199 (48.74%), Postives = 125/199 (62.81%), Query Frame = 1 
Query:  310 LDSLSPSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLGLLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALNYIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGKADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV 906
            LD+L    KF +LV  +   FG+HN+LQ           E ++H  GF FGWSLG LE +GV V S +ER    E G R   +RSYV     L  SSSL+N AL+YI YPTKV+FRSCKLIPTM I+ +  +K     E+ AA +VC GL++F  AD ++ P F P GI +V LSV  DA LPN+QE +F+ G+SR+EV
Sbjct:   72 LDTLPRIWKFCLLVVGLFFFFGVHNLLQ-----------EQIMHFPGFTFGWSLGFLEVLGVTVFSYWERRWYKEAGVRRGSWRSYVGTTLCLMGSSSLANKALDYINYPTKVVFRSCKLIPTMVISSVMNQKPFKGVEYAAAVAVCVGLILFAFADVRVAPSFSPWGITLVSLSVVCDAVLPNLQERLFAEGSSRLEV 259
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17008.4998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDY8_9PHAE4.370e-15884.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWE3_ECTSI2.690e-13980.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448ZJK1_9STRA3.980e-5350.00Uncharacterized protein n=2 Tax=Pseudo-nitzschia m... [more]
A0A1Z5KIZ6_FISSO5.190e-5248.48Solute carrier family 35 (Adenosine 3'-phospho 5'-... [more]
A0A1E7FGG3_9STRA2.860e-5149.49UAA transporter (Fragment) n=2 Tax=Fragilariopsis ... [more]
A0A7S2EPC4_TRICV3.690e-5147.12Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B7G8T2_PHATC4.610e-5149.50Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4J105_9STRA5.550e-4946.97Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9W0D0_9STRA1.020e-4844.61Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
W7U2S7_9STRA1.480e-4848.74Udp-galactose transporter n=2 Tax=Monodopsidaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17008contigEcto-sp13_S_contig17008:56..3029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score413.3
Seed ortholog evalue9.5e-113
Seed eggNOG ortholog2880.D7FWE3
Preferred nameSLC35B3
Model size906
KEGG koko:K15277
KEGG TC2.A.7.11.5
Hectar predicted targeting categoryother localisation
GOsGO:0000137,GO:0000139,GO:0000295,GO:0003674,GO:0005215,GO:0005346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0006029,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0012505,GO:0015012,GO:0015075,GO:0015215,GO:0015216,GO:0015605,GO:0015711,GO:0015748,GO:0015865,GO:0015868,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0022857,GO:0030166,GO:0030173,GO:0030176,GO:0030201,GO:0031090,GO:0031224,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031984,GO:0031985,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046483,GO:0046963,GO:0046964,GO:0050427,GO:0050428,GO:0051179,GO:0051234,GO:0051503,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0072348,GO:0072521,GO:0072522,GO:0072530,GO:0090407,GO:0098588,GO:0098656,GO:0098791,GO:0098827,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1901679,GO:1901682,GO:1902559
Exons5
EggNOG free text desc.3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG1582@2759
Cds size882
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17008.4998.1prot_Ecto-sp13_S_contig17008.4998.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17008 56..3005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462891.5917883-CDS-Ecto-sp13_S_contig17008:55..941681462891.5917883-CDS-Ecto-sp13_S_contig17008:55..94Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17008 56..94 -
1681462891.6076646-CDS-Ecto-sp13_S_contig17008:635..8571681462891.6076646-CDS-Ecto-sp13_S_contig17008:635..857Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17008 636..857 -
1681462891.6209428-CDS-Ecto-sp13_S_contig17008:1555..17741681462891.6209428-CDS-Ecto-sp13_S_contig17008:1555..1774Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17008 1556..1774 -
1681462891.633389-CDS-Ecto-sp13_S_contig17008:2134..23791681462891.633389-CDS-Ecto-sp13_S_contig17008:2134..2379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17008 2135..2379 -
1681462891.6447515-CDS-Ecto-sp13_S_contig17008:2848..30051681462891.6447515-CDS-Ecto-sp13_S_contig17008:2848..3005Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17008 2849..3005 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462891.6549218-UTR-Ecto-sp13_S_contig17008:3005..30291681462891.6549218-UTR-Ecto-sp13_S_contig17008:3005..3029Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17008 3006..3029 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17008.4998.1

>prot_Ecto-sp13_S_contig17008.4998.1 ID=prot_Ecto-sp13_S_contig17008.4998.1|Name=mRNA_Ecto-sp13_S_contig17008.4998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
MELGGIHGHFRAEGDEGGARQGLVGGGGEGGVGGRGGEVLPKRGAGRGDH
REDPPRREAGGGGGGVALVNGSGGGRTSARPTAASFNAKGPLAAWLDSLS
PSLKFAILVSCVMVSFGLHNILQASAKGFRALIFESLIHMEGFNFGWSLG
LLEAIGVLVGSMFERVHGGEVGKRVAPFRSYVVLAGLLGMSSSLSNMALN
YIKYPTKVIFRSCKLIPTMAIAVLWRKKIVSRWEFLAAFSVCAGLVIFGK
ADAKLEPDFDPRGIAMVMLSVCADAFLPNMQEHVFSMGASRVEV
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mRNA from alignment at Ecto-sp13_S_contig17008:56..3029-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17008.4998.1 ID=mRNA_Ecto-sp13_S_contig17008.4998.1|Name=mRNA_Ecto-sp13_S_contig17008.4998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2974bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17008:56..3029- (Ectocarpus species13 EcNAP12_S_4_19m)
CCGCGGGTGCGTGTGGACGCAGACATGGAGCTTGGCGGCATTCACGGGCA
CTTCAGGGCGGAGGGGGATGAGGGCGGAGCACGTCAGGGGCTGGTGGGGG
GCGGTGGAGAAGGTGGGGTTGGGGGGAGGGGGGGGGAGGTGTTACCGAAG
CGCGGCGCGGGCCGAGGCGACCATCGCGAAGGTGGGCGGCCCTCGAGAAT
CGAAACGAAGGGTTCCATGGCTTCGAGAGATTGATAGTAGACCCATGACT
TAGATGAAGAAAATATGCTTCTGAGGACAGGGTATCACAGGGGCTTCGGG
AGCCAAGAGGGCGCACTGCGCTTCCCTGGCACTGCTCATTGTACACAGCA
GAAGTGGCAGAACTTTACATCGCGCATCATTGACAAACTGTTAGTAACCA
CCACCCCGTTTTTCCAACGGCACCGAGGTCCTCGCCGTCAGTCCGTTTGC
TTGTTCATCTGTTTCGCCTGCCGCTGTTGTTGCGGTGTCGGCGTCATATG
CGGGCCATTCTGGTTGCCGACGTTATGTTGCACCTCGGCGAGACGGCGAA
GAAGACCAAACACGCCTGTCAAAGCTGCTCACGGCAGTTGTTTTCCTCTC
TTGTTTTTTGCCCTGTTTTTCTCGTGCTTGTTCTTTTTGTGTTTTCTCAG
ACCCGCCAAGGCGAGAGGCCGGCGGCGGCGGCGGCGGCGTTGCGCTTGTC
AACGGCAGCGGCGGCGGTAGAACAAGCGCGAGGCCGACGGCGGCGTCTTT
CAACGCCAAGGGACCCCTGGCGGCATGGCTGGACTCTCTGTCCCCTTCCC
TCAAGTTCGCCATCCTCGTTAGCTGTGTCATGGTGTCGTTCGGTCTCCAC
AACATCCTCCAGGCCAGTGCCAAGGGGTTCCGTGCGTTAATTTTCGTGGA
AGGGGGGGGGGGAAGGGGGCACTTCTTTCTCGTTCTCGTGAATCGTTGTT
GACATCCCGGGCGTGTTTTCAGCAGCATGCAGTTATTTTTAACCACCTTT
TCATTCACGTTAAGCGGCTCGCCCCCCCCCTCCCCCCCCCCCGGCGCCCC
TGCGGCATTGGCAATATCGGAGTACGTTGAGAGACGGGGCCGCGCAGACC
GACAGAAAGACAGGACAGAGAGAGGGAAGAGGTTACGAAAAAGGGACAGG
CTTTTCAGAATAGTCGATATGGAGGGAAAACGATTTTTTCCGACCTCGCG
CCCGAACTAGACTGTTGACGTGTTGGATAAAACGTGTGCTCGTCGTATGC
AACAGGAGTCGCTCATCCACATGGAAGGTTTCAACTTCGGCTGGTCCCTC
GGACTCCTAGAGGCTATCGGCGTGTTGGTCGGGTCGATGTTCGAGCGCGT
TCACGGGGGCGAGGTGGGGAAGAGGGTAGCGCCCTTTCGCAGCTACGTGG
TTCTCGCTGGGCTGCTGGGCATGTCGAGCTCGCTCTCGAACATGGCCCTC
AACTACATCAAGTACCCCACGAAGGTGACGACGGTTCGTTTTTTCCGACG
GCGTTTTTTTTTTTGCATAGTTTTCTGTCACAATCCAAGCAATTTTTATA
TCAATCCACAGACAAGATTCCTGGCTGGAATGCGTACTTGGTTGGTTGAT
GGTGTTGTGTGACCAACCTGTGGTTCTTCTTTTCTCCACGTAACGTACGG
TGATATCTCAACTGAGGGCGAATATCCCCTTTGGGCCTTTGGGTAGAATG
CTAGGCTCAACAAGATGGCTTGGTTGGGAAAAGCTTCGCTCTCGGGCGTG
GCCGCTCCGACCACCTGGGGGTCGTTTGCACCCAAAAGTATCTACCACAC
GTGACATAAGATACCATTCCCCCCGGAGCGATTTTCGAAGCTAGGTAAAA
AATTCACCGCAGAAGAAAGTGGTGACGGAGCCGACAGTGGTGGCGTTGGC
AATGGTCTCGTCGCAGGCTTTCCGAGCACGTACCGTTTGATTTGTTCGTC
CTCTTTGTCGTGGAGTAGCGAGCGTCCAAAATCGGTCCAGGGGGGGTGAT
ATATTACGTCACCTACGGGTGTCGGTGTTGCGGGGATATCGCTCCGGTCG
GGTGCTTTCGGATCAGACCGTTAAGGTAGCTATCCTCAAGGCAAACGCCC
TTCCTCTTGCACCCGGCCGCCACCACCTCCTCCTCCTCCTCCTCCGCTTC
CTCTAACGCCGACGGCTCACAGGTAATCTTTCGCTCCTGCAAGCTCATCC
CGACCATGGCCATCGCCGTGCTGTGGCGCAAGAAGATCGTGTCCAGGTGG
GAGTTCCTCGCGGCGTTTTCCGTGTGTGCCGGCCTCGTCATCTTCGGGAA
GGCCGACGCGAAGCTCGAGCCAGACTTCGACCCAAGGGGGATCGCGATGG
TGATGCTCTCGGTGTGCGCGGACGCGTTCCTTCCCAACATGCAGGTGACA
AAGGCCAAGAGTGTGTTGTCTCTCTTTCTCTCTCCCGGTACAACGGAACC
CGCCATGCCCCCCCCCCCCCCCCCAAACGGCAGTTTTGGCGTTTTTGTGC
TTGCACTTTTATTAGTCTCTGAAGGGTTTGGTAGAATTATTGCTGGTTTT
GGGCGCTGTTTTACGCTTGGTCTGCATCTGCGCGTTGTTTGCGTGCGCCT
TTTTGATGTGGAGGAGGGCAGCCGTCTCTCATCGTTCCTTGTCAAAGAGT
CATCTTTTGTAACGTCTCTGTTCGTGCTTCCGAGACTGCTAGTTCGATGA
CTACGTGGGTGTAGACGCGTCCGGCGGGGAGTGGCATCCGCAGACGTGCT
TATGGGCCTACTTCCGACCAATGCGCCCAGACTCATGATGGATTGTGAAG
ACTTGTCGCTAACGTCACCGTCTCGTGCCCTCGGCTCTGCGTCTGTCCCT
GCCTTGCTCTGCATGTGTTTCCCGCCCTCGATCTGAACTGCTACCACATC
GTGATCAATATCTCAATGTGGGCGGGGTGTATCAGGAGCACGTGTTTAGC
ATGGGCGCGTCTCGAGTGGAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17008:56..3029-

>mRNA_Ecto-sp13_S_contig17008.4998.1 ID=mRNA_Ecto-sp13_S_contig17008.4998.1|Name=mRNA_Ecto-sp13_S_contig17008.4998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17008:56..3029- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCTTGGCGGCATTCACGGGCACTTCAGGGCGGAGGGGGATGAGGG
CGGAGCACGTCAGGGGCTGGTGGGGGGCGGTGGAGAAGGTGGGGTTGGGG
GGAGGGGGGGGGAGGTGTTACCGAAGCGCGGCGCGGGCCGAGGCGACCAT
CGCGAAGACCCGCCAAGGCGAGAGGCCGGCGGCGGCGGCGGCGGCGTTGC
GCTTGTCAACGGCAGCGGCGGCGGTAGAACAAGCGCGAGGCCGACGGCGG
CGTCTTTCAACGCCAAGGGACCCCTGGCGGCATGGCTGGACTCTCTGTCC
CCTTCCCTCAAGTTCGCCATCCTCGTTAGCTGTGTCATGGTGTCGTTCGG
TCTCCACAACATCCTCCAGGCCAGTGCCAAGGGGTTCCGTGCGTTAATTT
TCGAGTCGCTCATCCACATGGAAGGTTTCAACTTCGGCTGGTCCCTCGGA
CTCCTAGAGGCTATCGGCGTGTTGGTCGGGTCGATGTTCGAGCGCGTTCA
CGGGGGCGAGGTGGGGAAGAGGGTAGCGCCCTTTCGCAGCTACGTGGTTC
TCGCTGGGCTGCTGGGCATGTCGAGCTCGCTCTCGAACATGGCCCTCAAC
TACATCAAGTACCCCACGAAGGTAATCTTTCGCTCCTGCAAGCTCATCCC
GACCATGGCCATCGCCGTGCTGTGGCGCAAGAAGATCGTGTCCAGGTGGG
AGTTCCTCGCGGCGTTTTCCGTGTGTGCCGGCCTCGTCATCTTCGGGAAG
GCCGACGCGAAGCTCGAGCCAGACTTCGACCCAAGGGGGATCGCGATGGT
GATGCTCTCGGTGTGCGCGGACGCGTTCCTTCCCAACATGCAGGAGCACG
TGTTTAGCATGGGCGCGTCTCGAGTGGAGGTA
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