mRNA_Ecto-sp13_S_contig170.4987.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: D7G6D1_ECTSI (Fatty acid desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6D1_ECTSI) HSP 1 Score: 798 bits (2061), Expect = 1.890e-286 Identity = 378/391 (96.68%), Postives = 384/391 (98.21%), Query Frame = 1
Query: 274 STAQLRMGLENHKLSKQGRPDMAARAVSVPLTEPQSTEKAAFDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHTDKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKNDKSAFE 1446
STAQLRMGLE+HK SKQGRPDMAARAVSVPL E Q EKAAFDFGAEPPFTLADIRKAIPAKCFKKDT RSLSYLARD+VVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSF+GHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGAR+GRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKS LFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAK+YMVPYWINVMWLDVVTYLHHTDKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEAT+AVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKNDKSAFE
Sbjct: 21 STAQLRMGLESHKPSKQGRPDMAARAVSVPLAETQPAEKAAFDFGAEPPFTLADIRKAIPAKCFKKDTFRSLSYLARDMVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFIGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARMGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSSLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKIYMVPYWINVMWLDVVTYLHHTDKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATEAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKNDKSAFE 411
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: A9SC72_PHYPA (Predicted protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9SC72_PHYPA) HSP 1 Score: 495 bits (1275), Expect = 7.690e-167 Identity = 232/369 (62.87%), Postives = 286/369 (77.51%), Query Frame = 1
Query: 352 VSVPLT---EPQSTEKAA----FDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHT--DKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKND 1431
V+ PLT EP++ E A FD +PPFTL+DIR AIP C++K+T +SLSY+ RDV +V GLAAGA A+ + VWP YWLAQGTMFWALFV+GHDCGHGSFSN+K LNS +GHLTHS I+VPYHGWRISHRTHH NHGH+ENDESW P ++S MDF A++GR + YPFYL+ RSPGK+GSH++PKS LF PSE DV+TST C+ AM A L A F G +++ K+Y+VPYW+NV+WLD VTYLHH DK+VPWYRG+ W+YMRGGLST D DYGIFN+IHH+IGTHVVHHLFPQ+PHYH++EAT+AVKPVLGDY+ +P+KSGPIP HL+ +E +V D G+ V+Y+ D
Sbjct: 70 VAAPLTLVPEPETPEVAEEVQEFDASRKPPFTLSDIRAAIPKHCWEKNTWKSLSYVLRDVAIVFGLAAGAAAVNSWFVWPLYWLAQGTMFWALFVLGHDCGHGSFSNNKTLNSLIGHLTHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLTKSQYDGMDFWAKVGRLKFPWAMFAYPFYLWTRSPGKSGSHYDPKSDLFVPSEAKDVITSTTCWTAMLAGLVALSFAVGPMWVFKLYVVPYWVNVVWLDAVTYLHHHGYDKKVPWYRGTEWNYMRGGLSTIDRDYGIFNNIHHDIGTHVVHHLFPQIPHYHLIEATEAVKPVLGDYYRDPKKSGPIPTHLLDPLMTSLKEDHYVADTGDIVHYQTD 438
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: A9SE68_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SE68_PHYPA) HSP 1 Score: 494 bits (1272), Expect = 2.500e-166 Identity = 233/369 (63.14%), Postives = 284/369 (76.96%), Query Frame = 1
Query: 352 VSVPLT---EPQSTEKAA----FDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHT--DKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKND 1431
V+ PLT EP++ E A FD +PPFTL+DIR AIP C++K+T +SLSY+ RDV +V GLAAGA A+ + VWP YWLAQGTMFWALFV+GHDCGHGSFSN+K LNS +GHLTHS I+VPYHGWRISHRTHH NHGH+ENDESW P ++S KMD A++GR + YPFYL+ RSPGKTGSH++PKS LF PSE DV+TST C+AAM A L A F G +++ K+Y+VPYW+NV+WLD VTYLHH +K+VPWYRG W+YMRGGLST D DYGIFN+IHH+IGTHVVHHLFPQ+PHYH++EAT+AVKP+LG+Y+ P KSGPIP HL+ + +E FV D G VYY+ D
Sbjct: 74 VATPLTLVPEPETPEIAEESGEFDPARKPPFTLSDIRAAIPKHCWEKNTWKSLSYVMRDVAIVFGLAAGAAAVNSWFVWPLYWLAQGTMFWALFVLGHDCGHGSFSNNKTLNSLIGHLTHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLTKSQFDKMDLLAKVGRLKFPWAMFAYPFYLWARSPGKTGSHYDPKSDLFVPSEAKDVITSTTCWAAMLAGLVALSFAVGPMWILKLYVVPYWVNVVWLDAVTYLHHHGYEKKVPWYRGEEWNYMRGGLSTIDRDYGIFNNIHHDIGTHVVHHLFPQIPHYHLIEATEAVKPLLGEYYRNPMKSGPIPLHLLDPLLQSFKEDHFVADTGNIVYYETD 442
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: H1AD92_MARPO (Omega-3 desaturase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=H1AD92_MARPO) HSP 1 Score: 493 bits (1268), Expect = 1.320e-165 Identity = 235/379 (62.01%), Postives = 283/379 (74.67%), Query Frame = 1
Query: 313 LSKQGRPDMAARAVSVP---LTEPQSTEKAAFDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHT--DKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKS-GPIPFHLIKRFFKGTEECLFVEDEGETVYYKND 1431
L + RP V+VP L P+ E +FD A PPFTL+DIR AIP C++K+ +S+SY+ RDV +V GLAAGA + N VWP YW AQGTMFWALFV+GHDCGHGSFSN+K LNSFVGHL HS I+VP+HGWRISHRTHH NHGH+ENDESW P + + +D G+R GR + YPFYL+ RSPGK GSH++PKS LF PSEKN+VLTSTAC+ AM ALL G ++M K+Y+VPYW+NV+WLDVVTYLHH DK+VPWYRG W+YMRGGLST D DYGIFN+IHH+IGTHVVHHLFPQ+PHY+++EAT+AVKPVLG Y+ EP KS GP P HL K EE +V+DEG V+Y+ND
Sbjct: 72 LKRFQRPRTVEANVAVPTRTLVMPEEKEDDSFDASAPPPFTLSDIRAAIPKHCWEKNVWKSMSYVVRDVAIVFGLAAGAAYLNNWFVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNKALNSFVGHLAHSSILVPFHGWRISHRTHHQNHGHVENDESWHPLTEKMYRDLDGGSRTGRLTLPWAMFAYPFYLWGRSPGKEGSHYDPKSDLFVPSEKNEVLTSTACWTAMVALLLGLTVAAGPMWMLKLYVVPYWLNVVWLDVVTYLHHHGYDKKVPWYRGEEWNYMRGGLSTIDRDYGIFNNIHHDIGTHVVHHLFPQIPHYNLIEATEAVKPVLGKYYREPAKSPGPFPTHLFSTLLKSFEEDHYVKDEGNVVFYQND 450
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: A0A388KB72_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KB72_CHABU) HSP 1 Score: 486 bits (1251), Expect = 1.430e-163 Identity = 226/368 (61.41%), Postives = 272/368 (73.91%), Query Frame = 1
Query: 334 DMAARAVSVPLTEPQSTEKAAFDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHH---TDKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKN 1428
D A + P+ E EK +D GA PPF+LADIR AIP CF+KD+ RS SY+ RDV VV GLAA A + + VWP YWLAQGTMFWALFV GHDCGHGSFSN+KRLN FVGHLTHS I+VP+HGWRISHR HH+NHGH+ENDESWTP ++ +++ +IGR++ + + YPFYL+ R+PGKTGSHF+P S LF SE+ DV TS CY AM LL A KFG M K+Y+VPYW+ VMWLD VTYLHH K VPWYRG WSY RGGLST D DYGIFN+IHH+IGTHVVHHLFPQ+PHYH+VEAT+A K V+G+Y+ EPEKSG +P HL K + + +V DEG+ VYY++
Sbjct: 35 DEDADTQAEPVAEDTVGEKKKYDPGAPPPFSLADIRNAIPNHCFEKDSWRSFSYVVRDVAVVLGLAAAAAFLNSWFVWPFYWLAQGTMFWALFVAGHDCGHGSFSNNKRLNDFVGHLTHSSILVPFHGWRISHRNHHANHGHVENDESWTPATKKLYDSLNWSQKIGRYSLPLSMFAYPFYLWFRTPGKTGSHFDPSSDLFLASEEGDVRTSATCYFAMAGLLVALSVKFGIATMLKLYVVPYWVFVMWLDAVTYLHHHGHETKPVPWYRGEEWSYFRGGLSTIDRDYGIFNNIHHDIGTHVVHHLFPQIPHYHLVEATEAAKSVMGEYYREPEKSGLLPLHLFKTLWNSFKTDRYVADEGDVVYYQS 402
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: FAD3C_ARATH (sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic n=13 Tax=Brassicaceae TaxID=3700 RepID=FAD3C_ARATH) HSP 1 Score: 485 bits (1248), Expect = 1.080e-162 Identity = 235/399 (58.90%), Postives = 282/399 (70.68%), Query Frame = 1
Query: 274 STAQLRMGLENHKLSKQGRPDMAARAVSVPLTEP-------QSTEKAAFDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHTDKE--VPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKNDKSAF 1443
S++ L GL S+ G A VS PLT P + K FD GA PPF LADIR AIP C+ K+ +SLSY+ RDV +V LAAGA + N +VWP YWLAQGTMFWALFV+GHDCGHGSFSN +LNS VGHL HS I+VPYHGWRISHRTHH NHGH+ENDESW P S +D R RF ++++ YPFYL+ RSPGK GSH++P S LF P E+ DVLTSTAC+ AM ALL F G + M K+Y +PYWINVMWLD VTYLHH E +PWYRG WSY+RGGL+T D DYG+ N+IHH+IGTHV+HHLFPQ+PHYH+VEAT+A KPVLG Y+ EP+KSGP+P HL++ K +E +V DEGE VYYK D + +
Sbjct: 44 SSSPLSFGLN----SRDGFTRNWALNVSTPLTTPIFEESPLEEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSDEGEVVYYKADPNLY 438
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: A0A0D3BAP0_BRAOL (Uncharacterized protein n=22 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3BAP0_BRAOL) HSP 1 Score: 483 bits (1243), Expect = 3.880e-162 Identity = 231/376 (61.44%), Postives = 276/376 (73.40%), Query Frame = 1
Query: 340 AARAVSVPLT--EPQST----EKAAFDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHTDKE--VPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKNDKSAF 1443
AA V+ PLT P T E+ FD GA PPF LADIR AIP C+ K+ +S+SY+ RDV +V LAAGA + + LVWP YWLAQGTMFWALFV+GHDCGHGSFSN RLNS VGHL HS I+VPYHGWRISHRTHH NHGH+ENDESW P S K +D R RF ++++ YPFYL+ RSPGK GSH++P S LF P EKNDVLTSTAC+ AM ALL F G + M K+Y +PYWINVMWLD VTYLHH E +PWYRG WSY+RGGL+T D DYG+ N+IHH+IGTHV+HHLFPQ+PHY++VEAT+A KPVLG Y+ EP+KSGP+P HL+ K +E +V DEG+ VYYK D + +
Sbjct: 50 AALNVTTPLTADSPPPTSEEHERQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIFKTLDRPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKEKNDVLTSTACWTAMAALLVCLNFVMGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGVINNIHHDIGTHVIHHLFPQIPHYYLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSMKEDHYVSDEGDVVYYKADPNLY 425
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) n=11 Tax=Brassicaceae TaxID=3700 RepID=FAD3C_BRANA) HSP 1 Score: 481 bits (1239), Expect = 5.650e-162 Identity = 223/365 (61.10%), Postives = 272/365 (74.52%), Query Frame = 1
Query: 355 SVPLTEPQSTEKAAFDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHTDKE--VPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKNDKSAF 1443
S P+ E T++ FD GA PPF LADIR AIP C+ K+ +S+SY+ R++ +V LAAGA + N LVWP YW+AQGTMFWALFV+GHDCGHGSFSN RLNS VGHL HS I+VPYHGWRISHRTHH NHGH+ENDESW P S K +D R RF ++++ YPFYL+ RSPGK GSH++P S LF P E+NDVLTSTAC+ AM LL F G + M K+Y++PYWINVMWLD VTYLHH E +PWYRG WSY+RGGL+T D DYG+ N+IHH+IGTHV+HHLFPQ+PHYH+VEAT+A KPVLG Y+ EP+KSGP+P HL+ K +E FV DEG+ VYY+ D + +
Sbjct: 34 SPPIEEEPKTQR--FDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSDEGDVVYYEADPNLY 396
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: UPI0003E5DC6E (sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic-like isoform X1 n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI0003E5DC6E) HSP 1 Score: 483 bits (1243), Expect = 6.530e-162 Identity = 225/363 (61.98%), Postives = 271/363 (74.66%), Query Frame = 1
Query: 361 PLTEPQSTEKAAFDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHTDKE--VPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKSGPIPFHLIKRFFKGTEECLFVEDEGETVYYKNDKSAF 1443
PL E K FD GA PPF LADIR AIP C+ K+ +S+SY+ RDV +V LAAGA + N +VWP YWLAQGTMFWALFV+GHDCGHGSFSN+ RLN+ VGHL HS I+VPYHGWRISHRTHH NHGH+ENDESW P S + +D R RF ++++ YPFYL+ RSPGK GSH++P+S LF P EK DVLTSTAC+ AM ALL F G + M K+Y +PYWINVMWLD VTYLHH E +PWYRG WSY+RGGL+T D DYG+ N+IHH+IGTHV+HHLFPQ+PHYH+VEAT+AVKPVLG Y+ EP+KSGP+P HL+ K +E +V DEG+ VYYK D + +
Sbjct: 78 PLEEXXXXXKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVLRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNNPRLNNVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYQSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPESDLFLPKEKTDVLTSTACWTAMAALLICLNFVVGPVQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEATEAVKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHYVSDEGDVVYYKADPNMY 440
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Match: A0A1Y1I926_KLENI (Linoleate desaturase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I926_KLENI) HSP 1 Score: 483 bits (1242), Expect = 6.770e-162 Identity = 227/347 (65.42%), Postives = 274/347 (78.96%), Query Frame = 1
Query: 397 FDFGAEPPFTLADIRKAIPAKCFKKDTLRSLSYLARDVVVVAGLAAGALAIKNPLVWPAYWLAQGTMFWALFVVGHDCGHGSFSNSKRLNSFVGHLTHSFIMVPYHGWRISHRTHHSNHGHIENDESWTPPSRSTVKKMDFGARIGRFNKWMMLVVYPFYLYLRSPGKTGSHFNPKSPLFTPSEKNDVLTSTACYAAMGALLAAGCFKFGFLFMAKMYMVPYWINVMWLDVVTYLHHT--DKEVPWYRGSAWSYMRGGLSTRDHDYGIFNDIHHNIGTHVVHHLFPQMPHYHIVEATKAVKPVLGDYFVEPEKS-GPIPFHLIKRFFKGTEECLFVEDEGETVYYKN 1428
FD+GA+PPF+LADI+ AIP +C++K+TLRS++YLARDV+VV GLAA A A+ + + WP YWLAQGTMFWALFVVGHDCGHGSFS++K+LN F+GHLTHS I+VPYHGWRISHRTHH NHGH+ENDESW P + S K +D AR GR + L +PFYL+ RSPGK GSH++P LFTPSE+NDVLTS A M A+LAA G + K+Y+VPY +NV+WLDVVTYLHH ++++PWYRG W+YMRGGLST D DYGIFNDIHH+IGTHVVHHLFPQMPHY++ EAT+AVKPVLG+Y+ EPEKS GP+PFHL+K V DEGE VYYK
Sbjct: 91 FDYGAKPPFSLADIKNAIPKQCWEKNTLRSMTYLARDVLVVFGLAAAAAAVNSWVTWPLYWLAQGTMFWALFVVGHDCGHGSFSSNKKLNDFIGHLTHSSILVPYHGWRISHRTHHQNHGHVENDESWHPVTESIFKDLDPFARFGRLTFPIALFAFPFYLWKRSPGKEGSHYDPNCSLFTPSERNDVLTSNAYMVGMLAILAAVGVVAGPAMLFKLYIVPYILNVVWLDVVTYLHHHGYEEKIPWYRGEEWNYMRGGLSTIDRDYGIFNDIHHDIGTHVVHHLFPQMPHYNLKEATEAVKPVLGEYYREPEKSKGPLPFHLVKPLIDSFNNDHVVPDEGEVVYYKK 437 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig170.4987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig170.4987.1 >prot_Ecto-sp13_S_contig170.4987.1 ID=prot_Ecto-sp13_S_contig170.4987.1|Name=mRNA_Ecto-sp13_S_contig170.4987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=415bp MWDTLVSALGRSPKPDSILPTVRSTAQLRMGLENHKLSKQGRPDMAARAVback to top mRNA from alignment at Ecto-sp13_S_contig170:11666..19058+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig170.4987.1 ID=mRNA_Ecto-sp13_S_contig170.4987.1|Name=mRNA_Ecto-sp13_S_contig170.4987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig170:11666..19058+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig170:11666..19058+ >mRNA_Ecto-sp13_S_contig170.4987.1 ID=mRNA_Ecto-sp13_S_contig170.4987.1|Name=mRNA_Ecto-sp13_S_contig170.4987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1245bp|location=Sequence derived from alignment at Ecto-sp13_S_contig170:11666..19058+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |