mRNA_Ecto-sp13_S_contig16992.4977.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A6H5L8P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P6_9PHAE) HSP 1 Score: 539 bits (1388), Expect = 1.330e-185 Identity = 301/311 (96.78%), Postives = 305/311 (98.07%), Query Frame = 1
Query: 1 SPAARAAEASTTAADPNAIDQAAGASLSRRREAGAQQHERRDSARRAEYQHAARAEAEEVEGPEFFPLPTVAGQRQQPRTRPCACARYIGEFGAAPVERGYWFREEKVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIYQRNHDRRLLSLDDNVAVFQHLLGPTWEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKRK 933
SPAARAAEASTTAADPNAIDQAAGAS+SRRR+AGAQQH RRD ARRAEYQ+AARAEAEEVEGPEFFPLPT+AGQRQQPRTRPCACARYIGEFGAAPVERGYWFREEKVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXX VIYQRNHDRRLLSLDDNVAVFQHLLGPTWEV QIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEK LALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKRK
Sbjct: 440 SPAARAAEASTTAADPNAIDQAAGASVSRRRKAGAQQHGRRDDARRAEYQYAARAEAEEVEGPEFFPLPTLAGQRQQPRTRPCACARYIGEFGAAPVERGYWFREEKVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXXL-VIYQRNHDRRLLSLDDNVAVFQHLLGPTWEVVQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKRLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKRK 749
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: D7FHW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW9_ECTSI) HSP 1 Score: 533 bits (1373), Expect = 2.480e-184 Identity = 275/311 (88.42%), Postives = 278/311 (89.39%), Query Frame = 1
Query: 1 SPAARAAEASTTAADPNAIDQAAGASLSRRREAGAQQHERRDSARRAEYQHAARAEAEEVEGPEFFPLPTVAGQRQQPRTRPCACARYIGEFGAAPVERGYWFREEKVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIYQRNHDRRLLSLDDNVAVFQHLLGPTWEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKRK 933
S AARAAEASTTAADPNAIDQAAGASLSRR EAGAQQHERRD ARRAEYQ+AARAEAEEVEGPEFFPLPT+AGQRQQPRTRPCACARYIGEFGAAPVERGYWFREEKVENTRARIDALCGDVYRR VIYQRN +RRLLSLDDNVAVFQHLLGPTWEV QIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEK LALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKRK
Sbjct: 367 SQAARAAEASTTAADPNAIDQAAGASLSRRGEAGAQQHERRDDARRAEYQYAARAEAEEVEGPEFFPLPTLAGQRQQPRTRPCACARYIGEFGAAPVERGYWFREEKVENTRARIDALCGDVYRRRQEGRHAAEKEGGDGRESSRKRRQRL-VIYQRNDNRRLLSLDDNVAVFQHLLGPTWEVVQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKRLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKRK 676
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A7S3XXH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXH4_HETAK) HSP 1 Score: 168 bits (426), Expect = 1.850e-44 Identity = 91/225 (40.44%), Postives = 122/225 (54.22%), Query Frame = 1
Query: 247 CACARYIGEFGAAPVERGYWFR-EEKVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIYQRNHDRRLLSLDDNVAVFQHLLGPTWEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQ 918
CACAR++GEFG APVERGYWF + +V R R+ +C + XXXX V+YQRN +R+ + V + LGP WE+ ++H PC +Y AD+ T HGFQ++ +LF+PPG + EVFPYKYWK GYAPL +E G+ H MS P L VPL C S CR ++R ADV + E LR++ ++KQ
Sbjct: 232 CACARFLGEFGPAPVERGYWFGGDREVRAARGRMAVMCD--HESGAAGGRPLPADEAAEAAXXXXPPKHKMVVYQRNRNRKFQRFEAMVEALEEQLGPEWELEVLLHSTDRHPCAMYESFHAADVFYTAHGFQTIAVLFMPPGGLVYEVFPYKYWKVGYAPLVREVGLTHHWAMSPPAGPVHRALLAAVPLSVCSLSYRCRLFARDADVVVGEAALRRVVVSSKQ 454
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A7S2HI54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HI54_9STRA) HSP 1 Score: 162 bits (410), Expect = 7.960e-44 Identity = 94/269 (34.94%), Postives = 132/269 (49.07%), Query Frame = 1
Query: 226 QQPRTRPCACARYIGEFGAAPVERGYWFREEKVEN-TRARIDALC------GDV-------------------------------YRRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIYQRNHDRRLLSLDDNVAVFQHLLGPTWEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIM-SRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAK 915
++ + PC+CA++IGEFG AP+ERGYWF N TR RI LC GD+ + R +IYQR+ DRRL + + LG TW V ++H +PC L+ +L D+LLTPHGFQS+LL+F+ G+ + EVFP+KYWK GY P A E+G+ H SR SW K +AL + ERCM SI CR ++R +V +++ L ++ K A+
Sbjct: 21 KESESAPCSCAKFIGEFGGAPIERGYWFESSHAVNATRERIRKLCSWFPSTGDIRQPQEDPQFATVTTSLSSDQSILSHDFLNQLWYRGHRGAVSGDKATRTSHDSPPRQPMHQLIIYQRDRDRRLELHEVLRKNLRKRLGKTWNVTVVMHKENLDPCGLWEELRVTDLLLTPHGFQSILLIFMRRGSALFEVFPFKYWKIGYRPFANEYGLWHGWSQNSRATSWVKNVALSLISQERCMHSIDCRLYARQDNVYIDDSSLLKVVKLAR 289
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A6H5K1S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S1_9PHAE) HSP 1 Score: 135 bits (341), Expect = 4.060e-33 Identity = 83/232 (35.78%), Postives = 116/232 (50.00%), Query Frame = 1
Query: 220 QRQQPRTRPCACARYIGEFGAAPVERGYWFRE-EKVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIYQRNHDRRLLSLDDNVAVFQHLLGPTWEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAA 912
Q + R C +Y+ G + V+R WF E + R IDA C + R ++YQR+ +R++L D V Q LG W V ++HD+ PC L L D+LLTPHGFQSML LF+ PG+ + EVFP KY+K GYAP+A+ VRH + MSR + G + + E CMK CR ++RS+DV L+E L ++ A
Sbjct: 195 QGDETSAREPVCVKYLDTVGESVVQRSEWFPSPEDAASLRRAIDAYCPLSFLRSQEGEEEGVRRL---------------LLYQRDQNRQILHADKVVEDLQERLGGGWIVNMMMHDSDRHPCVLVETLAGVDVLLTPHGFQSMLGLFMRPGSLLFEVFPQKYFKAGYAPMAEGLDVRHAYSMSRALRPMMGHS--YPSTETCMKWYLCRWYARSSDVELDEESLERLVDLA 409
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A7S3GPP9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPP9_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.020e-31 Identity = 74/220 (33.64%), Postives = 110/220 (50.00%), Query Frame = 1
Query: 253 CARYIGEFGAA--PVERGYWFREE-KVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIYQRNHDRRLLSLDDNVAVFQHLLGPT-WEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQI 900
CARY+G G V+RG+WF +E+ R + C V+YQR+ R+L + ++ VA+ + L + W++ ++H + PC L L + D+LLTPHGFQSMLLLFLP + E+FP KY+K GY P E+GV H MS + + L L +V CM+S CR ++R+ DV L +H + +
Sbjct: 37 CARYMGSIGGTWPTVQRGHWFPNPGDIESFRDTLRTAC---------------PADPQLLKQTAKKKKYKMVLYQRDLSRKLANQEEAVAMLRSKLSESDWDIEILMHKTSRSPCTLMHHLYNTDILLTPHGFQSMLLLFLPRPGLMFEIFPEKYYKRGYGPFGAEYGVTHGGTMSPSTGYYQQLVLPYVSSAYCMESKFCRGFARNQDVILTKHGVNNL 241
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A482RTA3_9ARCH (DUF563 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTA3_9ARCH) HSP 1 Score: 114 bits (284), Expect = 1.960e-27 Identity = 60/140 (42.86%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 457 VIYQRNHDRRLLSLDDNVAVFQH--LLGPTWEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADV 870
VIYQR+ R+LL DNV H L WEV ++H PC L+ +LLTPHGFQSMLLL +PP + + EVFP++Y+K Y+P E GV H +MS P W GL + +V C ++ CR +R DV
Sbjct: 15 VIYQRDLSRKLLK-QDNVLQMLHSRLDNSKWEVEVVMHIPDRSPCTLHPLFAQTTLLLTPHGFQSMLLLLMPPSSLLFEVFPFRYYKPAYSPFGAEMGVHHGGVMSPPTYWLYGLLMQYVTTPWCTQTKMCRVNARDQDV 153
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: D7FGW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW3_ECTSI) HSP 1 Score: 120 bits (302), Expect = 2.130e-27 Identity = 64/152 (42.11%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 457 VIYQRNHDRRLLSLDDNVAVFQHLLGPT-WEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPV------SWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHL 891
VIYQR+ DR+LL ++ + LG W V +I+HD+ PC L +L AD+LLT HGFQSML LF+ PG+ + EV+P+KY+K+GYAP+A+ G+R+ + S P+ SW +E+CMK CR++ RS+DV + E +
Sbjct: 304 VIYQRDRDRKLLKTEELMDELWIRLGHLGWAVKEIIHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPPLLPFAFWSWPS--------VEQCMKWYVCRRYMRSSDVVITEDSI 447
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A6H5JCF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF3_9PHAE) HSP 1 Score: 118 bits (296), Expect = 4.050e-26 Identity = 63/145 (43.45%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 457 VIYQRNHDRRLLSLDDNVAVFQHLLGPT-WEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPV------SWEKGLALFFVPLERCMKSIHCRKWSRSADV 870
VIYQR+ +R+LL ++ + LG W V +IVHD+ PC L +L AD+LLT HGFQSML LF+ PG+ + EV+P+KY+K+GYAP+A+ G+R+ + S P+ SW +E+CMK CR++ RS+DV
Sbjct: 465 VIYQRDRNRKLLKTEELMDELWIRLGHLGWAVEEIVHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPPLLPFAFWSWPS--------VEQCMKWYLCRRYMRSSDV 601
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Match: A0A6H5JWT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT6_9PHAE) HSP 1 Score: 117 bits (292), Expect = 9.040e-26 Identity = 74/225 (32.89%), Postives = 104/225 (46.22%), Query Frame = 1
Query: 253 CARYIGEFGAAPVERGYWFRE-EKVENTRARIDALCGDVYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXV----IYQRNHDRRLLSLDDNVAVFQHLLGPTWEVAQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKGLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAA 912
C +Y+ G V +WF E + R I+ C + R V +YQR+ RR+ + + + LG W V +++HD +PC L + D+LLTPHGFQSML LFL PGA + EVFP+KY+ YA + + GVRH MSR S + E CM+ CR +SR+ DV +EE L ++ K A
Sbjct: 297 CVKYLNTVGRKKVSTEHWFPSPEDARSFRTAINTFCPMPFLRGAEEAGAGGDRHRRVEGDGWEGGGEGGVRRLLLYQRDQCRRIKNAAQVMEDLRERLGGDWLVEEMIHDADRQPCELVKTVGGVDVLLTPHGFQSMLGLFLRPGALLFEVFPHKYFWGQYAAMVEGLGVRHAWSMSR--SGRFFMRFAHPTTETCMRYKRCRAYSRNTDVEIEEQDLERLVKLA 519 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16992.4977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16992.4977.1 >prot_Ecto-sp13_S_contig16992.4977.1 ID=prot_Ecto-sp13_S_contig16992.4977.1|Name=mRNA_Ecto-sp13_S_contig16992.4977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp SPAARAAEASTTAADPNAIDQAAGASLSRRREAGAQQHERRDSARRAEYQback to top mRNA from alignment at Ecto-sp13_S_contig16992:1..3787- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16992.4977.1 ID=mRNA_Ecto-sp13_S_contig16992.4977.1|Name=mRNA_Ecto-sp13_S_contig16992.4977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3787bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16992:1..3787- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16992:1..3787- >mRNA_Ecto-sp13_S_contig16992.4977.1 ID=mRNA_Ecto-sp13_S_contig16992.4977.1|Name=mRNA_Ecto-sp13_S_contig16992.4977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16992:1..3787- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |