prot_Ecto-sp13_S_contig16982.4970.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16982.4970.1
Unique Nameprot_Ecto-sp13_S_contig16982.4970.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length519
Homology
BLAST of mRNA_Ecto-sp13_S_contig16982.4970.1 vs. uniprot
Match: A0A6H5JFG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG5_9PHAE)

HSP 1 Score: 756 bits (1952), Expect = 4.420e-266
Identity = 425/519 (81.89%), Postives = 448/519 (86.32%), Query Frame = 0
Query:    1 VDVGSLSNACSSLWQLLKFFDKAGRGDDKVALEEMISGFRKIRRKWATVKTERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQIDTAGDGLETANGTSINCCSSSSGVAKDLFNVERTERQEHSSSHAQDHGHPAPAXXXRPRRHEGFDGTGPTQHNHSSSHSQACTTINGDTISSIAPGGDPDPIQEPDPRRAGGGGERGQQEEIEPLGGSAEGDACGGSLGSAVPMGHPQPEQTHGASLYGDSGSIDARRLSRGMNVPSGSSCGGGVDXXXXXXXXXXXXXXXXXXXXXRSNTMVTWSEEGPRIEIDRCESDLVPTGARERRSAGQEQSCGADNQAGQIENNKEEGAKSRTRTSSIDILNAGRAVACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDENDAATSEAGNLLQVLESYMHRTGARFTDVFFFLDR 519
            VD  +L  A   + +LLKFFD AGRGDDKV LEEMISGFRKIRRKWATVK ERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQID AGDG ETANGTSINC SSSSGVAKDL  VERT +QE+SSSHAQDHGH AP+   +   HEGF+ T PTQHNHSSSH Q CTTIN DT SSI P G PDP +EP+P+RAGG GERGQQEE +PLGGSA+G A GGSLGSA PMGH + +   GASLYGDSGS+DARRLS+GMNV  G+ CGGGV XXXXXXXXXXXXXXXXXX      T+   SEE P  EID CESDLVP GA+E  SAGQEQ CGA NQAG IEN KEEG KSRTRTSSID+LNAGRAVACREHALDGMVYLGQRAYFLGLE+ETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDE+DA TSEAGNLLQVLESYMHRTGARFTDVFF LDR
Sbjct:   64 VDPSALLFADEDIDKLLKFFDNAGRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQIDPAGDGFETANGTSINCRSSSSGVAKDLSIVERTGKQENSSSHAQDHGHQAPSDRGKHHHHEGFEETDPTQHNHSSSHHQGCTTINRDTSSSITPDGIPDPTEEPEPKRAGGEGERGQQEESKPLGGSAQGAASGGSLGSAFPMGHHRSQGARGASLYGDSGSVDARRLSQGMNVLPGNRCGGGVXXXXXXXXXXXXXXXXXXX------TIARRSEEEPGHEIDHCESDLVPMGAKEGPSAGQEQWCGAGNQAGPIENYKEEGVKSRTRTSSIDMLNAGRAVACREHALDGMVYLGQRAYFLGLENETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFCLDR 576          
BLAST of mRNA_Ecto-sp13_S_contig16982.4970.1 vs. uniprot
Match: D8LCN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN4_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 3.340e-162
Identity = 311/519 (59.92%), Postives = 326/519 (62.81%), Query Frame = 0
Query:    1 VDVGSLSNACSSLWQLLKFFDKAGRGDDKVALEEMISGFRKIRRKWATVKTERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQIDTAGDGLETANGTSINCCSSSSGVAKDLFNVERTERQEHSSSHAQDHGHPAPAXXXRPRRHEGFDGTGPTQHNHSSSHSQACTTINGDTISSIAPGGDPDPIQEPDPRRAGGGGERGQQEEIEPLGGSAEGDACGGSLGSAVPMGHPQPEQTHGASLYGDSGSIDARRLSRGMNVPSGSSCGGGVDXXXXXXXXXXXXXXXXXXXXXRSNTMVTWSEEGPRIEIDRCESDLVPTGARERRSAGQEQSCGADNQAGQIENNKEEGAKSRTRTSSIDILNAGRAVACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDENDAATSEAGNLLQVLESYMHRTGARFTDVFFFLDR 519
            VD  +L  A   + +LLKFFDKAGRGDDKV LEEMISGFRKIRRKWATVK ERAGRVVLAKVVRLMRRAGMSLEEWFKFMD SQ                                                                                                                                                           EPDPR AGGGGERGQQ E +PLGGSA+GD  GGSLGSAVPMGH QPE THGASLYGD+GS+DARRLSR MNV SGS CGGG+D XXXXXXXXXXXXXXX      SNT+VT S+E P  EIDRCESDLVPTGA+ER SAGQEQ CG DNQAG IENNKEEGA+SRTR SSID+LNAGRA+ACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDE+DA TSEAGNLLQVLESYMHRTGARFTDVFFFLDR
Sbjct:   64 VDPSALLFADEDIDKLLKFFDKAGRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDTSQ-----------------------------------------------------------------------------------------------------------------------------------------------------------EPDPRHAGGGGERGQQGESKPLGGSAQGDVSGGSLGSAVPMGHHQPEGTHGASLYGDNGSVDARRLSRVMNVLSGSPCGGGIDGXXXXXXXXXXXXXXX------SNTIVTRSDEEPGYEIDRCESDLVPTGAKERPSAGQEQWCGTDNQAGHIENNKEEGAESRTRASSIDVLNAGRAIACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFFLDR 421          
BLAST of mRNA_Ecto-sp13_S_contig16982.4970.1 vs. uniprot
Match: A0A7S2B085_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B085_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.360e-7
Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   15 QLLKFFDKAGRGDD-----KVALEEMISGFRKIRRKWATVKTERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGF 101
            ++L + D  G  DD     K++L E+   FR+ +R  A  + E  GR  + K+  LM +  +++EEWFK MD SQ G GDG ++ LELR G 
Sbjct:   41 KVLNYIDSMGEPDDGPSDGKISLRELDQAFRRAKRARAGKEYEVLGRECVYKLEALMEQCDVTVEEWFKEMDNSQGGKGDGTVSTLELRRGL 132          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16982.4970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JFG5_9PHAE4.420e-26681.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCN4_ECTSI3.340e-16259.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B085_9STRA6.360e-739.13Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16982contigEcto-sp13_S_contig16982:523..3752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16982.4970.1mRNA_Ecto-sp13_S_contig16982.4970.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16982 523..3752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16982.4970.1 ID=prot_Ecto-sp13_S_contig16982.4970.1|Name=mRNA_Ecto-sp13_S_contig16982.4970.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=519bp
VDVGSLSNACSSLWQLLKFFDKAGRGDDKVALEEMISGFRKIRRKWATVK
TERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVG
FERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQIDTAGDGLETANGTS
INCCSSSSGVAKDLFNVERTERQEHSSSHAQDHGHPAPADHGRPRRHEGF
DGTGPTQHNHSSSHSQACTTINGDTISSIAPGGDPDPIQEPDPRRAGGGG
ERGQQEEIEPLGGSAEGDACGGSLGSAVPMGHPQPEQTHGASLYGDSGSI
DARRLSRGMNVPSGSSCGGGVDGGGDGGGGGGGGGGGDGGGGGRSNTMVT
WSEEGPRIEIDRCESDLVPTGARERRSAGQEQSCGADNQAGQIENNKEEG
AKSRTRTSSIDILNAGRAVACREHALDGMVYLGQRAYFLGLESETFTSKD
VSDLMRFIDTDVDFSLDIREMRLAISRLHADEDENDAATSEAGNLLQVLE
SYMHRTGARFTDVFFFLDR
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