mRNA_Ecto-sp13_S_contig16978.4967.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A6H5KLR8_9PHAE (Gal_mutarotas_2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLR8_9PHAE) HSP 1 Score: 463 bits (1191), Expect = 6.330e-158 Identity = 233/265 (87.92%), Postives = 237/265 (89.43%), Query Frame = 1
Query: 1 EDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
EDGTRETQEEH+RLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTT T+PD E AAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVD+ + GGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY
Sbjct: 258 EDGTRETQEEHSRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTXX-TTPDGEIAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDV----------------------EQGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 499
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A7S0FTU8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FTU8_9STRA) HSP 1 Score: 270 bits (690), Expect = 3.290e-83 Identity = 147/276 (53.26%), Postives = 176/276 (63.77%), Query Frame = 1
Query: 4 DGTRE-------TQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHR-RGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGG----AGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
DGTRE + EH +LLEE Q D GLWEESF GH DSKP GP SVGMD+ FPGS H++G+PEHA+S L+TT T + + +PYRLY LDVFEYELD + ALYG IPV++ G TAG+FWFNPTETFVD+ P N GG AG G ++SE G +DL LLPGP P ++++QY +TG+ LPPMFSLG+HQCRWNYRDE DV +V FEE D+PYDV+WLDIEHTDGKRY
Sbjct: 95 DGTREERPIEDEAEVEHRKLLEE-----QSSDLDREGLWEESFGGHTDSKPYGPMSVGMDIKFPGSSHLFGLPEHASSTVLQTTHGTDSK----------YHDPYRLYNLDVFEYELDETMALYGEIPVIISQSLSGGTAGIFWFNPTETFVDVYGP------------------NDDGGIGDTAGHGTTTHFMSESGVMDLFLLPGPDPHSLYEQYGRLTGRVSLPPMFSLGYHQCRWNYRDEPDVYAVHEKFEELDYPYDVLWLDIEHTDGKRY 337
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A1Z5JSS4_FISSO (Alpha 1,3-glucosidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSS4_FISSO) HSP 1 Score: 268 bits (686), Expect = 1.690e-81 Identity = 145/268 (54.10%), Postives = 169/268 (63.06%), Query Frame = 1
Query: 4 DGTRETQEEHNRLLEEAEAARQGKDESGL---GLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRR-GQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
DGTRE +EE E E RQ +E L GLWEE+F H DSKP GP SVGMD+ FPGS H+YGIPEHA+S LK T H+ EPYRLY LDVFEYELD + ALYGAIP ML + + GVFWFNP+ETFVDI + S A WISE G +DL LLPGP P ++++QYA++TG LPPMFSLG+HQCRWNY+DE+DV V FEE D+PYDV+WLDIEHTDGKRY
Sbjct: 273 DGTREEREEIKEEAVEEEDHRQLTEEQTLDPEGLWEETFSSHKDSKPFGPMSVGMDISFPGSKHLYGIPEHASSAVLKATR----------GEGSHYKEPYRLYNLDVFEYELDETMALYGAIPFMLSQSKTAGSVGVFWFNPSETFVDITSTDSSS------------------------TAHWISESGVIDLFLLPGPDPSSIYQQYAKLTGTTPLPPMFSLGYHQCRWNYKDEKDVYYVHEKFEELDYPYDVLWLDIEHTDGKRY 506
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A835Z3X1_9STRA (Alpha-glucosidase II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3X1_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.310e-80 Identity = 136/235 (57.87%), Postives = 156/235 (66.38%), Query Frame = 1
Query: 91 GLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
GL EE FDGH D+KP G TSVGMDV+FPGS +YGIPEHAASM+LK TT S +S+PYRLYTLDVFEYELD ALYGAIP+ + H G TA FW+NP+ETFVD GK RW+SE G +DL++LPGPTP +FKQY +TG P +PP FS+ FHQCRWNYRDE DV +VDAGFE D PYDV+WLDIEHTDGKRY
Sbjct: 175 GLGEERFDGHVDTKPFGATSVGMDVWFPGSQELYGIPEHAASMALKATTGDGAS----------YSDPYRLYTLDVFEYELDVPMALYGAIPLAVSHGAGGTAAAFWWNPSETFVD-----------------------------GGKGVRWLSESGVVDLMILPGPTPADMFKQYMLLTGAPAMPPHFSVAFHQCRWNYRDEADVAAVDAGFEAEDIPYDVLWLDIEHTDGKRY 370
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A7S2STM5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STM5_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.150e-79 Identity = 135/265 (50.94%), Postives = 169/265 (63.77%), Query Frame = 1
Query: 1 EDGTRETQEEHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
EDGTRE + N A + K +G G W+E+F GH DSKP GP SVGMD+ FPG+ H++GIPEHA +SL+ TT P+ H+S+PYR+YTLDVFEY+LD ALYG IP+++GH + G FWFNPTETF+D+ G+ R WISE G +DL+LLPGPTP + Q+ G ELPP+F+LG+HQCRWNY+DE+DV V+A FEE DFPYDV+WLDIEHTDGKRY
Sbjct: 241 EDGTREEKVRDN--------AEEEKLRNGDGFWQETFAGHTDSKPLGPASVGMDIDFPGAQHLFGIPEHATRLSLQPTT----GPNA------HYSDPYRMYTLDVFEYDLDVPMALYGGIPMVMGHTASASVGAFWFNPTETFIDVEKD------------------------GKASRTHWISESGIVDLMLLPGPTPKDILHQFTSAVGTQELPPLFALGYHQCRWNYKDEKDVAQVEAKFEELDFPYDVLWLDIEHTDGKRY 463
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A7S2FWR3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWR3_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.220e-78 Identity = 132/235 (56.17%), Postives = 158/235 (67.23%), Query Frame = 1
Query: 91 GLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
G WEESF GH DSKP GP SVG+DV FPGS H+YGIPEHA+SM+LK TT P + +S+PYRLYTLDVFEY+LD ALYG IP++ H T G FWFNPTETF+DI E +++ R+RWISE G +DL+L+PGPTP Q+ ++ G +LPPMFSLG+HQCRWNY+DE DV V A FEE +FPYDV+WLDIEHTDGKRY
Sbjct: 246 GFWEESFGGHTDSKPLGPASVGIDVDFPGSKHLYGIPEHASSMALKATT----GPGAD------YSDPYRLYTLDVFEYDLDVPMALYGGIPLVWSHTTRGTVGAFWFNPTETFIDI------------------EKDDKSA------RSRWISESGIVDLMLIPGPTPADAISQFTQLVGTTDLPPMFSLGYHQCRWNYKDEADVAQVHAKFEELNFPYDVLWLDIEHTDGKRY 446
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A7S1D5H9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H9_CYCTE) HSP 1 Score: 259 bits (662), Expect = 7.300e-78 Identity = 136/272 (50.00%), Postives = 171/272 (62.87%), Query Frame = 1
Query: 4 DGTRETQEE-------HNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHR-RGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
DGTRE ++E H +L E++ R+G +WEE F H DSKP GP SVGMD+ FP S H+YG+PEHA+S L+ T + A HFSEPYRLY LDVFEYELD + ALYG +P+++ H + T+GVFWFNPTETFVD+ GE K W+SE G +D+ +PGP+P +++QYA +TGK LPPMFSLG+HQCRWNY+DE DV +V FE D+PYDV+WLDIEHTDGKRY
Sbjct: 15 DGTREEKKEVEEETSTHRKLTTESDLDREG-------MWEEKFSSHHDSKPYGPMSVGMDITFPNSKHIYGLPEHASSTILQGT--------QGDGA--HFSEPYRLYNLDVFEYELDETMALYGEVPLVVSHSVKTGTSGVFWFNPTETFVDVMD------------------------EGESKSTHWMSESGIVDIFFMPGPSPSELYEQYALLTGKLALPPMFSLGYHQCRWNYKDEADVYNVHGHFESLDYPYDVLWLDIEHTDGKRY 245
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A812UNB7_9DINO (ModA protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812UNB7_9DINO) HSP 1 Score: 262 bits (669), Expect = 9.430e-78 Identity = 136/250 (54.40%), Postives = 164/250 (65.60%), Query Frame = 1
Query: 58 AARQGKDESG---LGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLG-HRRGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
A QG++ +G G+WEESF H D+KP+GP SVG D+ FP + VYGIPEHA ++LK T D +SEPYRLY LDVFEYE+D+ ALYG+IPVM+ + G+ AGVFW NPTETFVD+ G +G GK +RW+SE G D+ +L GPT AVFKQYA +TG LPP F+L +HQCRWNY+DE DV +VDAGFEE DFPYDVIWLDIEHTDGKRY
Sbjct: 208 AGAQGRELAGHDQAGMWEESFGSHTDTKPNGPMSVGSDISFPFASAVYGIPEHATDLALKHT-------DGSAGG---YSEPYRLYNLDVFEYEMDNPMALYGSIPVMVAANAEGRAAGVFWNNPTETFVDV----------------------AAGPSGSGKTSRWMSESGVFDVWVLAGPTAHAVFKQYASITGTQALPPKFALAYHQCRWNYKDEGDVAAVDAGFEEHDFPYDVIWLDIEHTDGKRY 425
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A401Q7W5_SCYTO (Gal_mutarotas_2 domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401Q7W5_SCYTO) HSP 1 Score: 249 bits (637), Expect = 3.140e-77 Identity = 128/246 (52.03%), Postives = 160/246 (65.04%), Query Frame = 1
Query: 79 ESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRRGQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETH-----NQTGGAGEGKRA--RWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
E G+WEE+F H DSKP+GP+SVG+D PG +HVYGIPEHA ++ LKTT +PYRLY LDVF+YE+++ ALYGA+P+ML H +T G+FW N ET+VDI S N G+T + GA E + RWISE G +D+ +L GP+P VF+QYA +TG LPP+F++G+HQCRWNY DE DV SVDAGF+E D PYDVIWLDIEHTDGKRY
Sbjct: 41 EDEAGMWEETFKTHTDSKPNGPSSVGLDFSLPGFEHVYGIPEHADTLKLKTT---------------DGGDPYRLYNLDVFQYEINNPMALYGAVPLMLAHNVRRTMGLFWLNAAETWVDI------------SSNTAGKTLFGKMLDYVQGANEIPQTDVRWISESGIIDVFVLLGPSPFDVFRQYASLTGTQALPPLFAIGYHQCRWNYNDEDDVRSVDAGFDEHDIPYDVIWLDIEHTDGKRY 259
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Match: A0A7S4K6T3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6T3_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.580e-76 Identity = 143/272 (52.57%), Postives = 176/272 (64.71%), Query Frame = 1
Query: 4 DGTRETQE-------EHNRLLEEAEAARQGKDESGLGLWEESFDGHPDSKPDGPTSVGMDVYFPGSDHVYGIPEHAASMSLKTTTTTPTSPDEETAAPPHFSEPYRLYTLDVFEYELDSSAALYGAIPVMLGHRR-GQTAGVFWFNPTETFVDIPTPFPSMPLPLLSHNPPGETHNQTGGAGEGKRARWISEGGALDLVLLPGPTPGAVFKQYAEVTGKPELPPMFSLGFHQCRWNYRDEQDVLSVDAGFEERDFPYDVIWLDIEHTDGKRY 795
DGTRE ++ EH +LLEE Q D G+WEESF H DSKP+GP SVG+D+ FP S H++G+PEHA+S+ L+TT E A +++PYRLY LDVFEYELD + ALYG IP+++ + G TAG F FNP+ETFVD+ L P G TGG R W++E G LDL LLPG T ++KQYA +TG LPPMFSLG+HQCRWNYRDE DV +V + FEE D+PYDV+WLDIEHTDGKRY
Sbjct: 377 DGTREERKVEGEAEAEHRKLLEE-----QSPDLDREGMWEESFSSHHDSKPNGPMSVGLDITFPSSRHIFGLPEHASSLVLQTT-------HGEGAK---YNDPYRLYNLDVFEYELDETMALYGHIPLVISQSKDGGTAGAFMFNPSETFVDVYDDAQPTKDQKLEVVPKGSASGTTGGM----RTHWMAESGVLDLFLLPGRTAPDLYKQYARLTGYASLPPMFSLGYHQCRWNYRDEPDVYAVHSKFEELDYPYDVLWLDIEHTDGKRY 629 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16978.4967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16978.4967.1 >prot_Ecto-sp13_S_contig16978.4967.1 ID=prot_Ecto-sp13_S_contig16978.4967.1|Name=mRNA_Ecto-sp13_S_contig16978.4967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp MARGKRRKSTTGSSRKQRRPGRARTRAGWVFGRRASMDIPTASPMVPPAWback to top mRNA from alignment at Ecto-sp13_S_contig16978:2..3789- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16978.4967.1 ID=mRNA_Ecto-sp13_S_contig16978.4967.1|Name=mRNA_Ecto-sp13_S_contig16978.4967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3788bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16978:2..3789- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16978:2..3789- >mRNA_Ecto-sp13_S_contig16978.4967.1 ID=mRNA_Ecto-sp13_S_contig16978.4967.1|Name=mRNA_Ecto-sp13_S_contig16978.4967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16978:2..3789- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |