mRNA_Ecto-sp13_S_contig1695.4959.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1695.4959.1
Unique NamemRNA_Ecto-sp13_S_contig1695.4959.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 2.800e-110
Identity = 363/1089 (33.33%), Postives = 481/1089 (44.17%), Query Frame = 1
Query:    7 CRLVRGRRYRPGNPGGMRREIFDTKLAILSNVLAEIRPPPGSSVTAWTGGGTLTKVAWVVASVVYLVVAFAYATSFNVTTAPAVYMAVSSWIIVAVSLRLAASTTAATARDIGAGSSPRERYRASALLV------------QRANRRAPNRGV--------AMPASG--------------------------------------AVNRDHAYWC-KWTDNLWHKCKSMDDWTEDD-----FRKD--MEKSEDVRNEARDQFETKQTHEDWLRLVDRWQPNVDDKETWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVSDG---GEWACSRCGELGGYADDLWFCDGCSPDEEDGSGGTDSG---DAGWTDGMNEEGGGGAGGVNGYSTDEEDGNDI-----GDPES-------NNQEIAGKKSRKRD---------------KKHSVLVDLGGDDSVE---QRLQKEYQQAMDMKEEMKGCTAKLETRNLTLNDVKSALLELDQESTDGPCLQMAFQNLEKSGYRLYGIKV-----RCRGRKGKKNEEKGTMIRRGGRQEKWWTSKSTKIQA*IFSRFAG-AVDKGSCSAH*TFFAERWITTITRTLFRQGTTR----GGWVYFFAASCVWLTSKSRSTSSKTXXXXXXXVXXXXFRRRKRIRQCVFGGKP*ITFGRRVPPRP*LNTSTTPLGIQTRTL*MTWGRTRRSL--RCWGYVVTMRLTPLDLF-----DHPGAFNSKG-----------HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHD--------GELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARV--GSADEGCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVLSDKTGCLLGKRENEDHLYPAAYQQQIDEVVKTLSDEGVTAVDM--FSCALHILDSLTAACLRPQDSLGFRACRAGLCEKRTLGVCP 2847
            CRLVRGRRYR G PGG+RR+IF   LA L  VLAEI PPP   V  W           VV   VYL  A               ++A S W  VA    L      A A+ +G    P  R  A    +            +R  RR  NRG         A P+SG                                      +V RDH +W  K  + L +    ++ W  DD     ++KD   E+ E  R    +Q E             R Q    D+  W                               +    G   G+W CS C   G             PD     GG + G   DAG    ++EE             +EED  D+       P S       + Q     K RKR                 KHS L+   G D+V    +RL  +++ A  M  E+K    K +TR+LT   ++ AL +       G       + LEK  YRLYGIKV     R R R G    +KGT++R   R++   T + T+      + + G  +    C     +     +    R    QG T        V  F    + + +                      R+ KR R  V       T  + V  +          GIQ  +L  T      S+  +  G ++        LF     D   A N+ G           H+ FVNHFVRGAQ++WKLGRPTS ESC+AP+SAG A D         EL + + L +Y+ K T+C I  E A +CGLG R +LARARV  G     C+KW +HCPLYR ++FTRPE  GDI PT+EN+++VS T+R R   +SA ++S  + QD  V   + + YDPVAS+KRN+ANAHENSLSRLG+GSK D GR F ++DW+DK  ++ +LV++ GIKPIM K+  A RRKEV EMC++VL D  G  +GKR++E HLYP  Y++QIDEVV  L+  GV+  D+  FSCALHILDSLT+ACLRPQDSLG  AC+A +   R + V P
Sbjct:  271 CRLVRGRRYRAGTPGGVRRQIFRRHLAALHQVLAEIDPPPEPPVCRWANKS-------VVVGAVYLAAAVXXXXXXXXXXXXXXFVATSIWAAVA---SLLFPVDHARAQAVGVDKPPITRLEADRYFMGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEVALGRGKRKKTTTDKDKSVSAASSVPRDHTHWVGKEAEILANVKNGLEGW--DDAYLAKWKKDHQAEREEAERIFGEEQLEXXXXXXXXXXXXXR-QAEESDRACWKCGEVDHRSDGDLIILCDGADCSGASHVGCCDPPLQGVPDGDWFCSECVATGRAPVSNQEDTETLPD----FGGVEEGFICDAGDAADVDEE-------------EEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTARTMLAEIKKARTKQDTRSLTYLHIEKALGD-----PTGRDFSDVVEKLEKFDYRLYGIKVMGQGGRVRSRPG----QKGTLVRDVHRKK---TGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQ-----------VQKYVIDDDRKIKRRRDAV-------TLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEARRDGSLFMALGLDRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAGGAVDELSEEVDLPNYETKQTICTISPEDASKCGLGTRLLLARARVSTGHGVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPFYKSAVEISSTKDQDLRVLNSIFDAYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFSIEDWKDKCKFLADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLP 1299          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 2.410e-85
Identity = 319/1056 (30.21%), Postives = 460/1056 (43.56%), Query Frame = 1
Query:    1 RVCRLVRGRRYRPGNPGGMRREIFDTKLAILSNVLAEIRPPPGSSVTAWTGGGTLTKVAWVVASVVYLVVAFAYATSFNVTTAPAVYMAVSSWIIVAVSLR-------LAASTTAATARDIGAGSSPRERYRASALLVQRANRRAPNRGVAMPASGAVNRDHAYWCKWTDNLWHKCKSMDDWTEDDFRKDMEKSEDVRNEARDQFETKQTHEDWLRLVDRWQPNVDDKETWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVSDGGEW-ACS-RCGE--LGGYADDLWFCDGCSPDEEDGSGGTDSGDAGWTDGMNEEGGGGAGGVNGYSTDEEDGNDIGDPES------------------------------------NNQEIAGKKSRKRDK-----------------KHSVLVDLGGDDSVEQRLQKEYQQAMDMKEEMKGCTAKLETRNLTLNDVKSALLELDQESTDGPCLQMAFQNLEKSGYRLYGIKVRCRGRKGKKNE-EKGTMIRRGGRQEKWWTSKSTKIQA*IFSRFAG-AVDKGSCSAH*TFFAERW------------------------ITTITRTLFRQGTTRGGWVYFFAASCVWLTSKSRSTSSK----TXXXXXXXVXXXXFRRRKRIRQCVFGGKP*ITFGRRVPPRP*LNTSTTPLGIQTRTL*MTWGRTRRSLRCWGYVVTMRLTPLDLFDHPGAFNSKGHLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARVGSADEGCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKL-RGADRRKEVEEMCMEVLSDKTGCL------LGKRENEDHLYPAAYQQQIDEVVKTLSDEGVTAVDM--FSCALHILDSLTAACLRPQDSLGFRACRAGLCEKRTLGVCPATCR 2859
            R CR+VRGRRYRP   GG+       KLA L  +  ++     S  +A  G G++  VA  +  V YL +A A+ T F      + Y+ +SSWI+ + SLR       L  +   A+ R  GAG +      AS L+   A  R    G    A+ A+ R H +W       W       +W++  + K M  S+D R  A          ++WL            KE                                     D   W AC  +C +  L       + C  C    E+     +S       G NEEG   AG          DG   GD                                         + ++ K S K  K                 +HS LV+ G DD +  +L+   ++A D++EE++G  AK + R LTL ++K+AL+++D ++  G     A++ L K  YRLYGI V  R  +GK  + EKGT +R    +E                  AG ++DK +CS     F  +W                        + TI    +R        ++     C+      R T+S     T       +      R   +R+  +     ++    + P   +    +P   +        G     L   G+  T  L  + + +    F+ K  +EF NHF+RGAQ AWKLGRPTSFESC+ P+SAG  +  ELP  I   S D +NT+     ++A ECGLG RA+L +ARVGS + GCYKW+ H PLYR+   TRP+  G I   +EN+S  S T++   L+++   +S    QD  V +++ E Y  VA+ KR+ A+ +EN L R+G+G K DNGRL    +W+  + ++G+ VE+  I P MD++   A+ R EV +MCMEVL DK+         LGKR +EDHLYP +Y+ QID VV    D GV A D+  FS  L ILDSLTAACLRPQD LG  A +  +   R + V P  C+
Sbjct:  420 RKCRVVRGRRYRPARHGGVVGISLPRKLATLLRLKLKLMSKRRSPASA-RGDGSMDNVAAALTGVTYLAIALAFCTVFGRVMGFSYYLTISSWIVFSRSLRSGELLDELGGNIDLASVRG-GAGPAGTTTRSASGLVAP-APARFNEDGGTTSAAPALERPHMFWLAKMRG-WKVLLESGEWSQAQYNKIMADSKDERENA---------EKEWLDEA------AAKKEADAAEAAERRRVEKLACCECDELEDRPKGDELVLCDGDDCPWGACHMKCDKPNLKSVPRGDYLCPKCRERNEEHELLCESA----ATGENEEGDVAAG----------DGGADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKSVSRKSSAKNKKSICAPKNKRGRLPLPSGRHSGLVNFGDDDKLRDQLEGNRKRARDLREEIRGDRAKADHRYLTLCEIKAALMDVDGDT--GGDFDTAWKKLGKIDYRLYGITVMGRRLRGKGVQYEKGTKVRDSDGRE---------------GVVAGYSLDKETCSG---LFTVQWGEKETTEHGLYDVLELAENFGDPDVVTIGDDKWRVR------MFLRGVLCMVNVQVRRYTTSSENRVTRRRNLYTLPSESADRTMAMRKTAYEEIQDVSSASTMTPYE-IKILESPSDPELVRDLEKAGSFFTMLGLDGFKDTQELGLVYVREE---FH-KRQVEFANHFIRGAQVAWKLGRPTSFESCLVPVSAGGVYT-ELPSEINCASCDRENTVVTNTCQQARECGLGVRALLVKARVGSVESGCYKWMKHFPLYRVFVDTRPDRIGKINVGTENTSHASQTRKDAALLKTGVDVSATSSQDRAVLKQIGEKYKEVANVKRSDASDYENGLKRVGNGQKYDNGRLARGAEWKKDLKFLGDSVEESVIAPFMDRIGEDAEGRDEVVKMCMEVLEDKSDATHNKNRYLGKRLDEDHLYPDSYRAQIDAVVGMFWDSGVDASDLASFSQGLQILDSLTAACLRPQDWLGCLASQVYVKGTRLIFVLPPECK 1410          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5L2T9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T9_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 2.250e-67
Identity = 116/214 (54.21%), Postives = 152/214 (71.03%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHD--------GELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARV--GSADEGCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLV 2508
            H+ FVNHFVRGAQ++WKLGRPTS ESC+AP+SAG A D         EL + + L +Y+ K T+C I  E A +CGLG R +LARARV  G     C+KW +HCPLYR ++FTRPE  GDI PT+EN+++VS T+R R   +S  ++S  + QD  V   + + YDPVAS+KRN+ANAHENSLSRLG+GSK D GR F ++DW+DK  ++ +LV
Sbjct:  202 HMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAGGAVDELSEEVDLPNYETKQTICTISPEDASKCGLGTRLLLARARVSTGHGVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPCYKSTVEISSTKEQDLRVLNSIFDAYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFSIEDWKDKCKFLADLV 415          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5KG30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG30_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 1.090e-60
Identity = 129/234 (55.13%), Postives = 162/234 (69.23%), Query Frame = 2
Query: 2810 RAYVRNGRLEFVLPRVDKNSNTLVRSVLGMVVSHIKANRTACPYAVMIVIGRRLMRIRLREDFAIAKTNEGAAREEEQRAREKLNAA-EPNEVTV--AEKSLKKVTESLKKASRVVNKYRVRKKENDNEVDLARLGRRGGQSRAVGCAELGDKLCPFTEYGKNYNGNQLRDLCKHVGQYYLGLPAFGPNFLCTIHVTSVMAVCYQ*GINQADDRVLNHFALGRHGEYEMRKAYN 3502
            +AYV+NGRL  VL  V KNS TLV SV+GMVV+H K  RT  P+AVM+VIGRRLM + L+E++  A   +  ARE+++ A  +L+ A + +E +   A + L   ++SL +A + V  Y  R  E  ++ D  R  RR  Q+R +  AELGDK  PFT+YGKNYN  QLR +  HVG+Y LGLPAFGPN L TIHVT+VM VCY  GI Q+DDRVLNHFAL RHGEYEMRKAYN
Sbjct:  159 KAYVKNGRLVIVLTPVGKNSRTLVNSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDDARRDLAAASDSLNRADKEVQHYAPRDSEKADQEDNVR-NRRRRQARVLQFAELGDKAAPFTKYGKNYNDGQLRSMYLHVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYN 391          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 6.050e-37
Identity = 118/310 (38.06%), Postives = 163/310 (52.58%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARVGSADE------GCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWM--GNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVLSDKTGCLLGKRENEDHLYPAAYQQQIDEVVKTLSDEG-VTAVD--MFSCALHILDSLTAACLRPQDSLG 2793
            HL FVNHFVRGAQA+++LGRPT+  S +  +S  E     LP G+Q ++   ++T      E      LG R +LARARV  ++E         ++L   PLYRLLD +R +    + PT+E+SS VSPT R R     A+        D  VF  +   Y  V+ EKR++    EN   R+  G+K + GR   V   E    ++    LV + GI   M+KL   D   ++ +MC EVL         KRENEDHL P  ++Q+I+ +V  L +   VT  D  + SC+L +LDSL  A LR QD LG
Sbjct:  836 HLAFVNHFVRGAQASFRLGRPTNMASSMIHLSVNE-----LPPGVQAKTLKEQDTQLYQPGE-PTSFSLGMRCVLARARVKDSEEFGDGGSSTCQFLMRYPLYRLLDLSRVDNL-PLCPTTEHSSHVSPTLRHRDAYSQAFSSHSKRKADLDVFDIIKGGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPDKD---DIVKMCNEVLEMNPR----KRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILG 1131          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5K3D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D8_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.590e-29
Identity = 89/239 (37.24%), Postives = 134/239 (56.07%), Query Frame = 1
Query: 1888 SKGHLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGF--RAMLARARVGSADEGCYKWLSHCPLYRLLDFTRPE-EWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVL 2595
            +K H    +H+V+ AQAA+KLGR  SFESC+AP+S G  HD ELP G++L   + +     I  + A E G G   RA++ARARV  +DE C +W ++ PLY ++ F+RPE +   I PT+EN+S++SPT++       A + S     D  V     + Y+ VA EK+  +   EN   R+G G K   GR     + E  + +M  ++++ G+KP+MD +   D      E+C  VL
Sbjct:  769 AKQHYSTADHYVKVAQAAYKLGRLMSFESCMAPLSVGGVHD-ELPPGVRLAHEEQRKITLTILKKEASEAGYGLAMRALVARARV--SDELC-QWYAYAPLYMVMLFSRPEIDKKSIKPTTENTSRLSPTRKHTIAFNEAMEFSRTRIADLEVVDLWYKQYEYVAKEKKRLSVIWENKRVRMGYGPKVKGGRTHKSGNNE-SILFMRKMLKENGVKPVMDLMSDEDM-----EVCYRVL 997          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5JX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX39_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.050e-28
Identity = 94/257 (36.58%), Postives = 142/257 (55.25%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKN-TLCKIKLE-RAVECGLGFRAMLARARVGSADEGCYKWLSHCPLYRLLDFTRP-EEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVLSDKTGCLLGKRENEDHLYPAA 2658
            H   ++H+++GAQAA+KLGR  S ESC+AP+  G   + ELP G+ L   + +  +L  +KLE      GL  RA++ARARV  ++E C +W ++ PLYR + F+RP  +   I PT+E++S+VSPT++     Q A  LS    QD  V       Y+ VA EK+  A   +N   R+G G K   GR     + E  V ++  +++K G+ P+MD +   D+     E+C  VL      + G+  +E  LYPAA
Sbjct:  879 HYSTIDHYIKGAQAAYKLGRVMSLESCMAPLFIGGDRE-ELPPGVNLAHEEQRRISLHIMKLEVNVARYGLATRALVARARV--SNELC-QWYAYAPLYRTMLFSRPGRDKKPIKPTTESTSRVSPTRKHFVAFQKAMDLSITRRQDREVIDLWYSEYEGVAKEKKRLAVIWDNRRVRMGIGPKVKGGRTHKSGNNE-VVFFLRKMLKKHGVDPVMDLVSDEDK-----EVCYRVLEADPDAI-GEHTDEAQLYPAA 1124          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D8LMU9_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU9_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 2.700e-27
Identity = 91/237 (38.40%), Postives = 132/237 (55.70%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQL---ESYDIKNTLCKIKLERAVECGLGFRAMLARARVGSADEGCYKWLSHCPLYRLLDFTRP-EEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVL 2595
            H   V+H+++GAQAA+KLGR  S ESC+AP+S G   D ELP G+ L   E   I   + KI++  A   GL  RA++ARARV  ++E C +W ++ PLYR + F+RP  +   I PT+EN+S+VSPT++     Q A  LS    +D  V       Y+ VA EK+  A   EN   R+G G K   GR     + E  V ++  +++K G+  +MD +   D+     E+C  VL
Sbjct:  443 HYSTVDHYIKGAQAAYKLGRVMSLESCMAPLSMGGDRD-ELPPGVNLAHEEQRRISLHIMKIEVNVA-RYGLATRALVARARV--SNELC-QWYAYAPLYRTMLFSRPGRDKKPIKPTTENTSRVSPTRKHFVAFQKAMDLSITRREDLEVIDLWYSEYEGVAKEKKRLAVIWENRRVRMGYGPKVKGGRTHKSGNNE-AVLFLRKMLKKNGVDLVMDLVSDEDK-----EVCYRVL 668          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5JMD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD7_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 9.420e-21
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 2
Query: 3323 HVGQYYLGLPAFGPNFLCTIHVTSVMAVCYQ*GINQADDRVLNHFALGRHGEYEMRKAYN 3502
            HVG+Y LGLPAFGPN L TIHVT+VM VCY  GI Q+DDRVLNHFAL RHGEYEMRKAYN
Sbjct:    4 HVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYN 63          
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D8LHA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA1_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 9.080e-18
Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1888 SKGHLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGF--RAMLARARVGSADEGCYKWLSHCPLYRLLDFTRPE-EWGDIAPTSENSSK 2256
            +K H   V+H+V+GAQAA+KLGR  SF+SC+AP+S G  HD ELP G++L   + +     I  + A E G G   RA+++RARV  +DE C +W +  PLY ++ F+RPE +   I  T+EN  K
Sbjct:  241 AKQHYSTVDHYVKGAQAAYKLGRVMSFQSCMAPLSVGGVHD-ELPPGVRLAHEEQRKITLPITKKEASEAGYGLATRALVSRARV--SDELC-QWYASAPLYTVMLFSRPERDKKSIKLTTENEVK 362          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K4R3_9PHAE2.800e-11033.33PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D7FKZ5_ECTSI2.410e-8530.21PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2T9_9PHAE2.250e-6754.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KG30_9PHAE1.090e-6055.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH64_ECTSI6.050e-3738.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3D8_9PHAE2.590e-2937.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX39_9PHAE2.050e-2836.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMU9_ECTSI2.700e-2738.40PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JMD7_9PHAE9.420e-2181.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHA1_ECTSI9.080e-1844.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1695contigEcto-sp13_S_contig1695:9916..14452 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3502
Hectar predicted targeting categorysignal anchor
Exons5
Cds size1365
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1695.4959.1prot_Ecto-sp13_S_contig1695.4959.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1695 9970..12220 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462887.802126-UTR-Ecto-sp13_S_contig1695:9915..99691681462887.802126-UTR-Ecto-sp13_S_contig1695:9915..9969Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1695 9916..9969 +
1681462887.8522885-UTR-Ecto-sp13_S_contig1695:12220..137341681462887.8522885-UTR-Ecto-sp13_S_contig1695:12220..13734Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1695 12221..13734 +
1681462887.8620744-UTR-Ecto-sp13_S_contig1695:13883..144521681462887.8620744-UTR-Ecto-sp13_S_contig1695:13883..14452Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1695 13884..14452 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462887.8128967-CDS-Ecto-sp13_S_contig1695:9969..103041681462887.8128967-CDS-Ecto-sp13_S_contig1695:9969..10304Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1695 9970..10304 +
1681462887.8230875-CDS-Ecto-sp13_S_contig1695:10774..112221681462887.8230875-CDS-Ecto-sp13_S_contig1695:10774..11222Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1695 10775..11222 +
1681462887.8331957-CDS-Ecto-sp13_S_contig1695:11378..114941681462887.8331957-CDS-Ecto-sp13_S_contig1695:11378..11494Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1695 11379..11494 +
1681462887.8427525-CDS-Ecto-sp13_S_contig1695:11754..122201681462887.8427525-CDS-Ecto-sp13_S_contig1695:11754..12220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1695 11755..12220 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1695.4959.1

>prot_Ecto-sp13_S_contig1695.4959.1 ID=prot_Ecto-sp13_S_contig1695.4959.1|Name=mRNA_Ecto-sp13_S_contig1695.4959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=455bp
MRREIFDTKLAILSNVLAEIRPPPGSSVTAWTGGGTLTKVAWVVASVVYL
VVAFAYATSFNVTTAPAVYMAVSSWIIVAVSLRLAASTTAATARDIGAGS
SPRERYRASALLVQRANRRAPNRGVAMPASGAVNRDHAYWCKWTDNLWHK
CKSMDDWTEDDFRKDMEKSEDVRNEARDQFETKQTHEDWLRLVDRWQPNV
DDKETWWDEKHLEKEMTRTKELRDAALEQHETEESEEEAVSDGGEWACSR
CGELGGYADDLWFCDGCSPDEEDGSGGTDSGDAGWTDGMNEEGGGGAGGV
NGYSTDEEDGNDIGDPESNNQEIAGKKSRKRDKKHSVLVDLGGDDSVEQR
LQKEYQQAMDMKEEMKGCTAKLETRNLTLNDVKSALLELDQESTDGPCLQ
MAFQNLEKSGYRLYGIKVRCRGRKGKKNEEKGTMIRRGGRQEKWWTSKST
KIQA*
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mRNA from alignment at Ecto-sp13_S_contig1695:9916..14452+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1695.4959.1 ID=mRNA_Ecto-sp13_S_contig1695.4959.1|Name=mRNA_Ecto-sp13_S_contig1695.4959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4537bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1695:9916..14452+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCGTGTGCAGGCTTGTGCGTGGGCGGCGTTATCGCCCCGGGAATCCTGG TGGCATGCGCCGCGAGATTTTCGACACGAAACTGGCCATCCTCAGCAACG TCCTCGCCGAAATCCGTCCGCCACCGGGTTCGAGCGTCACTGCGTGGACT GGTGGGGGTACGCTGACGAAGGTCGCCTGGGTCGTCGCCAGCGTGGTGTA TCTGGTTGTTGCCTTCGCCTATGCCACCTCGTTCAACGTCACGACCGCTC CCGCCGTTTACATGGCCGTCTCTAGCTGGATTATTGTCGCCGTGTCGCTC CGTCTCGCCGCCTCTACCACTGCCGCTACCGCTCGAGATATCGGTGCCGG CTCCAGTCCGAGAGAGCGCTACAGGGCTAGTGCGCTGCTGTCTGGTCGGA GGTTTGGTTCTTGTCATAGAACTCGCCGCCGTTACGGGAGGAGGAGGGAG AATAGAGGATACCTGAAAGAGGTTTCTTGCAACCCTGGGACTTCGCGTTC ATATGGACATGGGATTGCGGCTCTCCGTGGAGGAGCGGATCCAGCGAACA GCGCGAACGGTCAGGTGTGTGTGGTTCGTGTTTACACGTATTTGGTATTC TATCGATACTGAAGGTCTTGTCAATTTTAGGTGAGAGGGTTGAATTTGGT GAGAGGCTATAGAAGCAGAGGGGATGAGAATTTCTTGCGATATCCAATTC GTCTCCAAATATTCCTCGATGTCATGGGTTGTTTGGCGAAAGTTGCCTAT GTTTGGATTGTAAACGCTGTATACGGTGAGACCCAAAATACACCCAGCTT TTCGGCCGTTTGCAAATCATGTGTTTGTGTTTCTCCGACCAGGGTGCTAG TGGAGAAAGGGTGCAAAGAGCTAACAGGAGAGCTCCGAATCGCGGGGTGG CTATGCCGGCCAGCGGTGCTGTGAACAGAGACCACGCTTACTGGTGTAAA TGGACGGATAATTTGTGGCACAAGTGTAAGAGTATGGACGACTGGACCGA AGACGATTTCCGAAAAGACATGGAAAAGTCTGAGGATGTGAGGAATGAAG CGAGGGATCAATTTGAGACAAAACAGACCCACGAGGACTGGTTACGCTTA GTGGATAGATGGCAACCAAACGTCGACGACAAGGAAACTTGGTGGGACGA AAAACACTTGGAAAAAGAGATGACAAGGACAAAGGAGCTTAGAGACGCGG CATTGGAACAGCACGAAACAGAGGAAAGCGAGGAGGAAGCGGTATCGGAT GGAGGCGAATGGGCGTGCTCTCGGTGCGGAGAACTGGGTGGCTATGCTGA TGACTTGGTGGATGGAGAGGTGAGTTTTCTTGACTCCAGTTCACGTTTTC ACCATTGATATACTTGTATTGTGCTTTGTTTTCGTTTCATCGAACGTGTG TCTTGAAAATGATGTAAGTGTGTTAGTGTCGCGAACGTTGCAGACACCGT TGTACAATTACAGTGGTTCTGTGACGGGTGTTCACCCGACGAGGAGGACG GGAGCGGCGGGACGGACAGTGGTGATGCGGGATGGACGGATGGAATGAAC GAGGAGGGTGGTGGTGGTGCTGGTGGCGTGTCAGATGGAGAGGTGAGTTT TTTGTTGCTGTGTGTCTTGTAGTGTGGTTCCGTTCCGCTGAATATTTCGC CTGTCAACATCTTTCAGTACACATTCTCGATATAATTGTTGATATACATA GGAGTGTCCTTTCGTACTCCTTACCTTGCTTTTCTTACACCGTTCCTGAG AAATACGACAAGTTTTTCCCCCTGAACATGCTGTAGCTAGCTGAAAGCGC AGTTGATCAAGAGCTGATCGGTCACCTTGCGTTGTGCAGTAACGGGTATT CGACCGATGAGGAGGACGGCAATGATATTGGTGATCCTGAGAGCAACAAC CAAGAGATTGCCGGCAAGAAGTCGCGAAAGAGAGATAAGAAGCATAGCGT TCTTGTGGACTTGGGTGGGGATGATAGCGTCGAGCAGCGACTACAGAAGG AGTATCAACAGGCCATGGATATGAAAGAAGAAATGAAGGGTTGTACAGCT AAGCTGGAGACGAGAAACTTGACACTGAACGACGTTAAGAGCGCTTTGCT CGAACTAGACCAAGAGTCCACGGATGGTCCGTGTCTCCAGATGGCCTTCC AAAATCTTGAGAAGTCAGGCTATCGCCTGTACGGCATCAAGGTTAGGTGT AGAGGAAGAAAGGGCAAGAAAAACGAAGAAAAAGGGACAATGATTAGACG CGGTGGAAGACAGGAGAAGTGGTGGACTTCGAAGTCGACAAAGATACAGG CTTGAATATTTTCGAGATTCGCTGGAGCAGTAGACAAAGGGAGCTGCTCA GCACACTAGACGTTCTTCGCGGAGCGGTGGATCACGACAATAACAAGGAC GTTGTTTCGCCAGGGGACGACACGCGGCGGGTGGGTCTATTTCTTCGCGG CGTCTTGTGTATGGTTAACGTCCAAGTCGAGAAGTACCTCATCGAAGACA ACCTCGCGACGAAGAGAAGGCGTGAAGCGACGTCGGTTCCGGAGGAGGAA AAGGATCAGACAATGCGTATTCGGAGGAAAGCCTTGAATCACGTTCGGAC GACGCGTGCCACCGAGACCATGACTGAACACGAGCACGACACCCTTGGGG ATTCAGACAAGGACTTTATAAATGACTTGGGGAAGGACGCGTCGTTCTTT GAGATGTTGGGGCTACGTCGTTACGATGAGATTAACACCCTTGGATTTAT TTGATCATCCGGGTGCCTTCAACTCAAAGGGACACCTGGAATTTGTCAAC CATTTTGTTCGAGGAGCGCAAGCAGCCTGGAAGCTGGGCCGTCCGACGAG CTTCGAGTCGTGCGTGGCTCCTATTTCTGCGGGGGAAGCGCACGACGGCG AGCTTCCGGATGGAATCCAGCTCGAAAGCTATGATATCAAGAACACGCTC TGCAAAATCAAGCTTGAACGCGCGGTCGAATGTGGCTTGGGTTTCAGGGC GATGCTTGCAAGGGCCAGGGTCGGTAGCGCTGACGAGGGGTGCTACAAGT GGCTTTCACACTGCCCTCTCTACAGACTTCTCGATTTTACTAGACCCGAG GAGTGGGGTGACATCGCACCGACAAGCGAGAATAGTTCAAAGGTCTCGCC GACACAGAGGCGTAGACATCTTGTCCAGAGCGCGTATAAGCTTAGTGATG CCGAGGGTCAAGACTGGGGGGTGTTTCAAAAACTGGTCGAGGTTTATGAT CCGGTGGCGAGCGAAAAGAGGAACCAGGCCAATGCCCACGAGAACAGTCT ATCTAGGCTGGGCAGCGGCAGCAAGAAGGACAACGGGAGGCTTTTCGACG TCAAGGATTGGGAAGACAAAGTAGATTGGATGGGAAACCTTGTGGAAAAG ATTGGGATCAAGCCGATTATGGACAAGCTTCGGGGCGCCGACCGCAGAAA GGAAGTGGAAGAAATGTGCATGGAAGTTCTGTCAGACAAGACGGGATGTT TGCTCGGGAAGCGTGAAAACGAGGACCACCTGTATCCTGCGGCGTACCAG CAGCAAATCGACGAGGTCGTCAAAACACTCTCGGACGAGGGGGTCACCGC CGTAGACATGTTTAGCTGCGCCCTCCACATCCTAGATTCGCTGACGGCAG CGTGTCTTCGGCCACAAGACTCGTTGGGATTCCGGGCATGTAGGGCGGGC CTATGTGAGAAACGGACGCTTGGAGTTTGTCCTGCCACGTGTAGACAAAA ATTCCAACACGCTGGTGCGTAGCGTCCTTGGAATGGTGGTCAGTCACATC AAGGCCAACCGGACAGCTTGTGAGTGTTACTGTCAGACGTAGATATTGCT GTCCATGGTTGAGCAGGTTGTGAAATGTGGTTGAGTCGTTGCACCACTCC CTTAGATTGTCTTGACATGTACCTGATATTTGTTCATTTTCTGTTTGGCT CTGTTCTGTAAATCACAGGCCCATATGCGGTCATGATCGTGATCGGCCGA CGGTTGATGAGGATTCGTTTGCGAGAAGACTTTGCAATAGCGAAGACCAA CGAGGGAGCGGCACGGGAAGAAGAACAACGGGCGCGGGAGAAGCTGAATG CTGCGGAACCTAACGAGGTGACGGTAGCGGAAAAATCACTTAAAAAAGTT ACGGAATCCCTGAAGAAAGCGTCCAGAGTAGTTAACAAGTACCGTGTCAG GAAAAAAGAAAACGATAACGAGGTTGATTTAGCCCGACTAGGCCGAAGGG GGGGACAATCTAGGGCTGTTGGGTGTGCGGAGCTTGGGGATAAGTTGTGC CCGTTCACTGAGTACGGGAAGAATTACAATGGGAATCAGCTCCGCGATCT CTGTAAACACGTGGGCCAGTACTACCTTGGTTTGCCCGCGTTCGGGCCTA ATTTTCTCTGCACGATACATGTCACGTCGGTGATGGCGGTTTGTTACCAG TAAGGAATTAACCAAGCAGATGACAGGGTGTTGAATCATTTTGCCCTGGG TAGGCACGGGGAGTATGAGATGAGGAAGGCGTACAAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1695:9916..14452+

>mRNA_Ecto-sp13_S_contig1695.4959.1 ID=mRNA_Ecto-sp13_S_contig1695.4959.1|Name=mRNA_Ecto-sp13_S_contig1695.4959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1365bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1695:9916..14452+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCCGCGAGATTTTCGACACGAAACTGGCCATCCTCAGCAACGTCCT
CGCCGAAATCCGTCCGCCACCGGGTTCGAGCGTCACTGCGTGGACTGGTG
GGGGTACGCTGACGAAGGTCGCCTGGGTCGTCGCCAGCGTGGTGTATCTG
GTTGTTGCCTTCGCCTATGCCACCTCGTTCAACGTCACGACCGCTCCCGC
CGTTTACATGGCCGTCTCTAGCTGGATTATTGTCGCCGTGTCGCTCCGTC
TCGCCGCCTCTACCACTGCCGCTACCGCTCGAGATATCGGTGCCGGCTCC
AGTCCGAGAGAGCGCTACAGGGCTAGTGCGCTGCTGGTGCAAAGAGCTAA
CAGGAGAGCTCCGAATCGCGGGGTGGCTATGCCGGCCAGCGGTGCTGTGA
ACAGAGACCACGCTTACTGGTGTAAATGGACGGATAATTTGTGGCACAAG
TGTAAGAGTATGGACGACTGGACCGAAGACGATTTCCGAAAAGACATGGA
AAAGTCTGAGGATGTGAGGAATGAAGCGAGGGATCAATTTGAGACAAAAC
AGACCCACGAGGACTGGTTACGCTTAGTGGATAGATGGCAACCAAACGTC
GACGACAAGGAAACTTGGTGGGACGAAAAACACTTGGAAAAAGAGATGAC
AAGGACAAAGGAGCTTAGAGACGCGGCATTGGAACAGCACGAAACAGAGG
AAAGCGAGGAGGAAGCGGTATCGGATGGAGGCGAATGGGCGTGCTCTCGG
TGCGGAGAACTGGGTGGCTATGCTGATGACTTGTGGTTCTGTGACGGGTG
TTCACCCGACGAGGAGGACGGGAGCGGCGGGACGGACAGTGGTGATGCGG
GATGGACGGATGGAATGAACGAGGAGGGTGGTGGTGGTGCTGGTGGCGTT
AACGGGTATTCGACCGATGAGGAGGACGGCAATGATATTGGTGATCCTGA
GAGCAACAACCAAGAGATTGCCGGCAAGAAGTCGCGAAAGAGAGATAAGA
AGCATAGCGTTCTTGTGGACTTGGGTGGGGATGATAGCGTCGAGCAGCGA
CTACAGAAGGAGTATCAACAGGCCATGGATATGAAAGAAGAAATGAAGGG
TTGTACAGCTAAGCTGGAGACGAGAAACTTGACACTGAACGACGTTAAGA
GCGCTTTGCTCGAACTAGACCAAGAGTCCACGGATGGTCCGTGTCTCCAG
ATGGCCTTCCAAAATCTTGAGAAGTCAGGCTATCGCCTGTACGGCATCAA
GGTTAGGTGTAGAGGAAGAAAGGGCAAGAAAAACGAAGAAAAAGGGACAA
TGATTAGACGCGGTGGAAGACAGGAGAAGTGGTGGACTTCGAAGTCGACA
AAGATACAGGCTTGA
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