mRNA_Ecto-sp13_S_contig1695.4959.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 2.800e-110 Identity = 363/1089 (33.33%), Postives = 481/1089 (44.17%), Query Frame = 1
Query: 7 CRLVRGRRYRPGNPGGMRREIFDTKLAILSNVLAEIRPPPGSSVTAWTGGGTLTKVAWVVASVVYLVVAFAYATSFNVTTAPAVYMAVSSWIIVAVSLRLAASTTAATARDIGAGSSPRERYRASALLV------------QRANRRAPNRGV--------AMPASG--------------------------------------AVNRDHAYWC-KWTDNLWHKCKSMDDWTEDD-----FRKD--MEKSEDVRNEARDQFETKQTHEDWLRLVDRWQPNVDDKETWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVSDG---GEWACSRCGELGGYADDLWFCDGCSPDEEDGSGGTDSG---DAGWTDGMNEEGGGGAGGVNGYSTDEEDGNDI-----GDPES-------NNQEIAGKKSRKRD---------------KKHSVLVDLGGDDSVE---QRLQKEYQQAMDMKEEMKGCTAKLETRNLTLNDVKSALLELDQESTDGPCLQMAFQNLEKSGYRLYGIKV-----RCRGRKGKKNEEKGTMIRRGGRQEKWWTSKSTKIQA*IFSRFAG-AVDKGSCSAH*TFFAERWITTITRTLFRQGTTR----GGWVYFFAASCVWLTSKSRSTSSKTXXXXXXXVXXXXFRRRKRIRQCVFGGKP*ITFGRRVPPRP*LNTSTTPLGIQTRTL*MTWGRTRRSL--RCWGYVVTMRLTPLDLF-----DHPGAFNSKG-----------HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHD--------GELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARV--GSADEGCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVLSDKTGCLLGKRENEDHLYPAAYQQQIDEVVKTLSDEGVTAVDM--FSCALHILDSLTAACLRPQDSLGFRACRAGLCEKRTLGVCP 2847
CRLVRGRRYR G PGG+RR+IF LA L VLAEI PPP V W VV VYL A ++A S W VA L A A+ +G P R A + +R RR NRG A P+SG +V RDH +W K + L + ++ W DD ++KD E+ E R +Q E R Q D+ W + G G+W CS C G PD GG + G DAG ++EE +EED D+ P S + Q K RKR KHS L+ G D+V +RL +++ A M E+K K +TR+LT ++ AL + G + LEK YRLYGIKV R R R G +KGT++R R++ T + T+ + + G + C + + R QG T V F + + + R+ KR R V T + V + GIQ +L T S+ + G ++ LF D A N+ G H+ FVNHFVRGAQ++WKLGRPTS ESC+AP+SAG A D EL + + L +Y+ K T+C I E A +CGLG R +LARARV G C+KW +HCPLYR ++FTRPE GDI PT+EN+++VS T+R R +SA ++S + QD V + + YDPVAS+KRN+ANAHENSLSRLG+GSK D GR F ++DW+DK ++ +LV++ GIKPIM K+ A RRKEV EMC++VL D G +GKR++E HLYP Y++QIDEVV L+ GV+ D+ FSCALHILDSLT+ACLRPQDSLG AC+A + R + V P
Sbjct: 271 CRLVRGRRYRAGTPGGVRRQIFRRHLAALHQVLAEIDPPPEPPVCRWANKS-------VVVGAVYLAAAVXXXXXXXXXXXXXXFVATSIWAAVA---SLLFPVDHARAQAVGVDKPPITRLEADRYFMGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEVALGRGKRKKTTTDKDKSVSAASSVPRDHTHWVGKEAEILANVKNGLEGW--DDAYLAKWKKDHQAEREEAERIFGEEQLEXXXXXXXXXXXXXR-QAEESDRACWKCGEVDHRSDGDLIILCDGADCSGASHVGCCDPPLQGVPDGDWFCSECVATGRAPVSNQEDTETLPD----FGGVEEGFICDAGDAADVDEE-------------EEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTARTMLAEIKKARTKQDTRSLTYLHIEKALGD-----PTGRDFSDVVEKLEKFDYRLYGIKVMGQGGRVRSRPG----QKGTLVRDVHRKK---TGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQ-----------VQKYVIDDDRKIKRRRDAV-------TLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEARRDGSLFMALGLDRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAGGAVDELSEEVDLPNYETKQTICTISPEDASKCGLGTRLLLARARVSTGHGVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPFYKSAVEISSTKDQDLRVLNSIFDAYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFSIEDWKDKCKFLADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLP 1299
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI) HSP 1 Score: 316 bits (810), Expect = 2.410e-85 Identity = 319/1056 (30.21%), Postives = 460/1056 (43.56%), Query Frame = 1
Query: 1 RVCRLVRGRRYRPGNPGGMRREIFDTKLAILSNVLAEIRPPPGSSVTAWTGGGTLTKVAWVVASVVYLVVAFAYATSFNVTTAPAVYMAVSSWIIVAVSLR-------LAASTTAATARDIGAGSSPRERYRASALLVQRANRRAPNRGVAMPASGAVNRDHAYWCKWTDNLWHKCKSMDDWTEDDFRKDMEKSEDVRNEARDQFETKQTHEDWLRLVDRWQPNVDDKETWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVSDGGEW-ACS-RCGE--LGGYADDLWFCDGCSPDEEDGSGGTDSGDAGWTDGMNEEGGGGAGGVNGYSTDEEDGNDIGDPES------------------------------------NNQEIAGKKSRKRDK-----------------KHSVLVDLGGDDSVEQRLQKEYQQAMDMKEEMKGCTAKLETRNLTLNDVKSALLELDQESTDGPCLQMAFQNLEKSGYRLYGIKVRCRGRKGKKNE-EKGTMIRRGGRQEKWWTSKSTKIQA*IFSRFAG-AVDKGSCSAH*TFFAERW------------------------ITTITRTLFRQGTTRGGWVYFFAASCVWLTSKSRSTSSK----TXXXXXXXVXXXXFRRRKRIRQCVFGGKP*ITFGRRVPPRP*LNTSTTPLGIQTRTL*MTWGRTRRSLRCWGYVVTMRLTPLDLFDHPGAFNSKGHLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARVGSADEGCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKL-RGADRRKEVEEMCMEVLSDKTGCL------LGKRENEDHLYPAAYQQQIDEVVKTLSDEGVTAVDM--FSCALHILDSLTAACLRPQDSLGFRACRAGLCEKRTLGVCPATCR 2859
R CR+VRGRRYRP GG+ KLA L + ++ S +A G G++ VA + V YL +A A+ T F + Y+ +SSWI+ + SLR L + A+ R GAG + AS L+ A R G A+ A+ R H +W W +W++ + K M S+D R A ++WL KE D W AC +C + L + C C E+ +S G NEEG AG DG GD + ++ K S K K +HS LV+ G DD + +L+ ++A D++EE++G AK + R LTL ++K+AL+++D ++ G A++ L K YRLYGI V R +GK + EKGT +R +E AG ++DK +CS F +W + TI +R ++ C+ R T+S T + R +R+ + ++ + P + +P + G L G+ T L + + + F+ K +EF NHF+RGAQ AWKLGRPTSFESC+ P+SAG + ELP I S D +NT+ ++A ECGLG RA+L +ARVGS + GCYKW+ H PLYR+ TRP+ G I +EN+S S T++ L+++ +S QD V +++ E Y VA+ KR+ A+ +EN L R+G+G K DNGRL +W+ + ++G+ VE+ I P MD++ A+ R EV +MCMEVL DK+ LGKR +EDHLYP +Y+ QID VV D GV A D+ FS L ILDSLTAACLRPQD LG A + + R + V P C+
Sbjct: 420 RKCRVVRGRRYRPARHGGVVGISLPRKLATLLRLKLKLMSKRRSPASA-RGDGSMDNVAAALTGVTYLAIALAFCTVFGRVMGFSYYLTISSWIVFSRSLRSGELLDELGGNIDLASVRG-GAGPAGTTTRSASGLVAP-APARFNEDGGTTSAAPALERPHMFWLAKMRG-WKVLLESGEWSQAQYNKIMADSKDERENA---------EKEWLDEA------AAKKEADAAEAAERRRVEKLACCECDELEDRPKGDELVLCDGDDCPWGACHMKCDKPNLKSVPRGDYLCPKCRERNEEHELLCESA----ATGENEEGDVAAG----------DGGADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKSVSRKSSAKNKKSICAPKNKRGRLPLPSGRHSGLVNFGDDDKLRDQLEGNRKRARDLREEIRGDRAKADHRYLTLCEIKAALMDVDGDT--GGDFDTAWKKLGKIDYRLYGITVMGRRLRGKGVQYEKGTKVRDSDGRE---------------GVVAGYSLDKETCSG---LFTVQWGEKETTEHGLYDVLELAENFGDPDVVTIGDDKWRVR------MFLRGVLCMVNVQVRRYTTSSENRVTRRRNLYTLPSESADRTMAMRKTAYEEIQDVSSASTMTPYE-IKILESPSDPELVRDLEKAGSFFTMLGLDGFKDTQELGLVYVREE---FH-KRQVEFANHFIRGAQVAWKLGRPTSFESCLVPVSAGGVYT-ELPSEINCASCDRENTVVTNTCQQARECGLGVRALLVKARVGSVESGCYKWMKHFPLYRVFVDTRPDRIGKINVGTENTSHASQTRKDAALLKTGVDVSATSSQDRAVLKQIGEKYKEVANVKRSDASDYENGLKRVGNGQKYDNGRLARGAEWKKDLKFLGDSVEESVIAPFMDRIGEDAEGRDEVVKMCMEVLEDKSDATHNKNRYLGKRLDEDHLYPDSYRAQIDAVVGMFWDSGVDASDLASFSQGLQILDSLTAACLRPQDWLGCLASQVYVKGTRLIFVLPPECK 1410
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5L2T9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T9_9PHAE) HSP 1 Score: 243 bits (620), Expect = 2.250e-67 Identity = 116/214 (54.21%), Postives = 152/214 (71.03%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHD--------GELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARV--GSADEGCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLV 2508
H+ FVNHFVRGAQ++WKLGRPTS ESC+AP+SAG A D EL + + L +Y+ K T+C I E A +CGLG R +LARARV G C+KW +HCPLYR ++FTRPE GDI PT+EN+++VS T+R R +S ++S + QD V + + YDPVAS+KRN+ANAHENSLSRLG+GSK D GR F ++DW+DK ++ +LV
Sbjct: 202 HMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAGGAVDELSEEVDLPNYETKQTICTISPEDASKCGLGTRLLLARARVSTGHGVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPCYKSTVEISSTKEQDLRVLNSIFDAYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFSIEDWKDKCKFLADLV 415
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5KG30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG30_9PHAE) HSP 1 Score: 229 bits (584), Expect = 1.090e-60 Identity = 129/234 (55.13%), Postives = 162/234 (69.23%), Query Frame = 2
Query: 2810 RAYVRNGRLEFVLPRVDKNSNTLVRSVLGMVVSHIKANRTACPYAVMIVIGRRLMRIRLREDFAIAKTNEGAAREEEQRAREKLNAA-EPNEVTV--AEKSLKKVTESLKKASRVVNKYRVRKKENDNEVDLARLGRRGGQSRAVGCAELGDKLCPFTEYGKNYNGNQLRDLCKHVGQYYLGLPAFGPNFLCTIHVTSVMAVCYQ*GINQADDRVLNHFALGRHGEYEMRKAYN 3502
+AYV+NGRL VL V KNS TLV SV+GMVV+H K RT P+AVM+VIGRRLM + L+E++ A + ARE+++ A +L+ A + +E + A + L ++SL +A + V Y R E ++ D R RR Q+R + AELGDK PFT+YGKNYN QLR + HVG+Y LGLPAFGPN L TIHVT+VM VCY GI Q+DDRVLNHFAL RHGEYEMRKAYN
Sbjct: 159 KAYVKNGRLVIVLTPVGKNSRTLVNSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDDARRDLAAASDSLNRADKEVQHYAPRDSEKADQEDNVR-NRRRRQARVLQFAELGDKAAPFTKYGKNYNDGQLRSMYLHVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYN 391
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI) HSP 1 Score: 163 bits (412), Expect = 6.050e-37 Identity = 118/310 (38.06%), Postives = 163/310 (52.58%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGFRAMLARARVGSADE------GCYKWLSHCPLYRLLDFTRPEEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWM--GNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVLSDKTGCLLGKRENEDHLYPAAYQQQIDEVVKTLSDEG-VTAVD--MFSCALHILDSLTAACLRPQDSLG 2793
HL FVNHFVRGAQA+++LGRPT+ S + +S E LP G+Q ++ ++T E LG R +LARARV ++E ++L PLYRLLD +R + + PT+E+SS VSPT R R A+ D VF + Y V+ EKR++ EN R+ G+K + GR V E ++ LV + GI M+KL D ++ +MC EVL KRENEDHL P ++Q+I+ +V L + VT D + SC+L +LDSL A LR QD LG
Sbjct: 836 HLAFVNHFVRGAQASFRLGRPTNMASSMIHLSVNE-----LPPGVQAKTLKEQDTQLYQPGE-PTSFSLGMRCVLARARVKDSEEFGDGGSSTCQFLMRYPLYRLLDLSRVDNL-PLCPTTEHSSHVSPTLRHRDAYSQAFSSHSKRKADLDVFDIIKGGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPDKD---DIVKMCNEVLEMNPR----KRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILG 1131
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5K3D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D8_9PHAE) HSP 1 Score: 138 bits (347), Expect = 2.590e-29 Identity = 89/239 (37.24%), Postives = 134/239 (56.07%), Query Frame = 1
Query: 1888 SKGHLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGF--RAMLARARVGSADEGCYKWLSHCPLYRLLDFTRPE-EWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVL 2595
+K H +H+V+ AQAA+KLGR SFESC+AP+S G HD ELP G++L + + I + A E G G RA++ARARV +DE C +W ++ PLY ++ F+RPE + I PT+EN+S++SPT++ A + S D V + Y+ VA EK+ + EN R+G G K GR + E + +M ++++ G+KP+MD + D E+C VL
Sbjct: 769 AKQHYSTADHYVKVAQAAYKLGRLMSFESCMAPLSVGGVHD-ELPPGVRLAHEEQRKITLTILKKEASEAGYGLAMRALVARARV--SDELC-QWYAYAPLYMVMLFSRPEIDKKSIKPTTENTSRLSPTRKHTIAFNEAMEFSRTRIADLEVVDLWYKQYEYVAKEKKRLSVIWENKRVRMGYGPKVKGGRTHKSGNNE-SILFMRKMLKENGVKPVMDLMSDEDM-----EVCYRVL 997
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5JX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX39_9PHAE) HSP 1 Score: 135 bits (340), Expect = 2.050e-28 Identity = 94/257 (36.58%), Postives = 142/257 (55.25%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKN-TLCKIKLE-RAVECGLGFRAMLARARVGSADEGCYKWLSHCPLYRLLDFTRP-EEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVLSDKTGCLLGKRENEDHLYPAA 2658
H ++H+++GAQAA+KLGR S ESC+AP+ G + ELP G+ L + + +L +KLE GL RA++ARARV ++E C +W ++ PLYR + F+RP + I PT+E++S+VSPT++ Q A LS QD V Y+ VA EK+ A +N R+G G K GR + E V ++ +++K G+ P+MD + D+ E+C VL + G+ +E LYPAA
Sbjct: 879 HYSTIDHYIKGAQAAYKLGRVMSLESCMAPLFIGGDRE-ELPPGVNLAHEEQRRISLHIMKLEVNVARYGLATRALVARARV--SNELC-QWYAYAPLYRTMLFSRPGRDKKPIKPTTESTSRVSPTRKHFVAFQKAMDLSITRRQDREVIDLWYSEYEGVAKEKKRLAVIWDNRRVRMGIGPKVKGGRTHKSGNNE-VVFFLRKMLKKHGVDPVMDLVSDEDK-----EVCYRVLEADPDAI-GEHTDEAQLYPAA 1124
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D8LMU9_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU9_ECTSI) HSP 1 Score: 130 bits (327), Expect = 2.700e-27 Identity = 91/237 (38.40%), Postives = 132/237 (55.70%), Query Frame = 1
Query: 1897 HLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQL---ESYDIKNTLCKIKLERAVECGLGFRAMLARARVGSADEGCYKWLSHCPLYRLLDFTRP-EEWGDIAPTSENSSKVSPTQRRRHLVQSAYKLSDAEGQDWGVFQKLVEVYDPVASEKRNQANAHENSLSRLGSGSKKDNGRLFDVKDWEDKVDWMGNLVEKIGIKPIMDKLRGADRRKEVEEMCMEVL 2595
H V+H+++GAQAA+KLGR S ESC+AP+S G D ELP G+ L E I + KI++ A GL RA++ARARV ++E C +W ++ PLYR + F+RP + I PT+EN+S+VSPT++ Q A LS +D V Y+ VA EK+ A EN R+G G K GR + E V ++ +++K G+ +MD + D+ E+C VL
Sbjct: 443 HYSTVDHYIKGAQAAYKLGRVMSLESCMAPLSMGGDRD-ELPPGVNLAHEEQRRISLHIMKIEVNVA-RYGLATRALVARARV--SNELC-QWYAYAPLYRTMLFSRPGRDKKPIKPTTENTSRVSPTRKHFVAFQKAMDLSITRREDLEVIDLWYSEYEGVAKEKKRLAVIWENRRVRMGYGPKVKGGRTHKSGNNE-AVLFLRKMLKKNGVDLVMDLVSDEDK-----EVCYRVL 668
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: A0A6H5JMD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD7_9PHAE) HSP 1 Score: 106 bits (264), Expect = 9.420e-21 Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 2
Query: 3323 HVGQYYLGLPAFGPNFLCTIHVTSVMAVCYQ*GINQADDRVLNHFALGRHGEYEMRKAYN 3502
HVG+Y LGLPAFGPN L TIHVT+VM VCY GI Q+DDRVLNHFAL RHGEYEMRKAYN
Sbjct: 4 HVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYN 63
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Match: D8LHA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA1_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 9.080e-18 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1888 SKGHLEFVNHFVRGAQAAWKLGRPTSFESCVAPISAGEAHDGELPDGIQLESYDIKNTLCKIKLERAVECGLGF--RAMLARARVGSADEGCYKWLSHCPLYRLLDFTRPE-EWGDIAPTSENSSK 2256
+K H V+H+V+GAQAA+KLGR SF+SC+AP+S G HD ELP G++L + + I + A E G G RA+++RARV +DE C +W + PLY ++ F+RPE + I T+EN K
Sbjct: 241 AKQHYSTVDHYVKGAQAAYKLGRVMSFQSCMAPLSVGGVHD-ELPPGVRLAHEEQRKITLPITKKEASEAGYGLATRALVSRARV--SDELC-QWYASAPLYTVMLFSRPERDKKSIKLTTENEVK 362 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1695.4959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1695.4959.1 >prot_Ecto-sp13_S_contig1695.4959.1 ID=prot_Ecto-sp13_S_contig1695.4959.1|Name=mRNA_Ecto-sp13_S_contig1695.4959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=455bp MRREIFDTKLAILSNVLAEIRPPPGSSVTAWTGGGTLTKVAWVVASVVYLback to top mRNA from alignment at Ecto-sp13_S_contig1695:9916..14452+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1695.4959.1 ID=mRNA_Ecto-sp13_S_contig1695.4959.1|Name=mRNA_Ecto-sp13_S_contig1695.4959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4537bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1695:9916..14452+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1695:9916..14452+ >mRNA_Ecto-sp13_S_contig1695.4959.1 ID=mRNA_Ecto-sp13_S_contig1695.4959.1|Name=mRNA_Ecto-sp13_S_contig1695.4959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1365bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1695:9916..14452+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |