mRNA_Ecto-sp13_S_contig1692.4944.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1692.4944.1
Unique NamemRNA_Ecto-sp13_S_contig1692.4944.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 6.300e-91
Identity = 186/204 (91.18%), Postives = 190/204 (93.14%), Query Frame = 3 
Query:  681 GANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHSAGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRVHPERLGLRQNTSHVQESTVLRVTRSRTKLLEREQVAGSSGEGATADGRTAREWAKMAHRVLGLDEGIFRTIVGYL 1292
            GANIQATRINGETPL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HSAGDEGAVEVVDLLLRWNADETDDDAYG  PG IVG M PETDS+FVNVQRVWKLLQYAPQDRAWRRRGMLVLCR HPERLGLRQN SHVQESTVLRVTRSRTKL+EREQVAG SGEGA ADGRTAREW+ M +RVLGLDEGIFRTIVGYL
Sbjct:  196 GANIQATRINGETPLHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGLDEGIFRTIVGYL 399
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: A0A6H5JBC2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC2_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.020e-40
Identity = 87/135 (64.44%), Postives = 89/135 (65.93%), Query Frame = 3 
Query:  678 AGANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHSAGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRVHPERL 1082
            AGANIQATRINGETP                                     VHSAGDEGAVEVVDLLLRWNADE DDD YGR P  +V RMAPETD +FVNVQRVWK LQYAPQDRAWR RGMLVLCRVHPERL
Sbjct:  407 AGANIQATRINGETPRHAAAGKLNFEATLALLKHGADMNALGQTRWTPLHSAVHSAGDEGAVEVVDLLLRWNADEADDDTYGRTPRNLVVRMAPETDRMFVNVQRVWKPLQYAPQDRAWRHRGMLVLCRVHPERL 541
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 9.850e-24
Identity = 108/228 (47.37%), Postives = 131/228 (57.46%), Query Frame = 3 
Query:  618 PSLDYAAYNNNVEAIDVLVEAGANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHS-AGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVN-VQRVWKLLQYAPQDRAWRRRGMLVLCRVHPERLGLRQNTSHVQESTVLRVTRSRTKLLEREQVAGSSGEGATADGRTAREWAKMAHRVLGLDE-GIFRTIVGYL 1292
            P+L  A   N V+A+ VL+EAGA+IQ    +  TPL              XXXXXXXXXXXXXXXXXXXXXX  S AG +G+ E+VDLLLR  ADET  D  G+ P   VG      D +  + V  V +LL  AP DRAWRRRG+LVLCR    R  LRQ         + R TRSR KL  R    G+     T +G T  EW   + RV+ L+E GIFR++VG+L
Sbjct:  196 PALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLA-RSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.000e-23
Identity = 68/151 (45.03%), Postives = 89/151 (58.94%), Query Frame = 3 
Query:  843 AGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRVHPERLGLRQNTSHVQESTVLRVTRSRTKLLEREQVAGSSGEGATADGRTAREWAKMAHRVLGL-DEGIFRTIVGYL 1292
            AG +GA EVV+ LLR  ADET  +  G     ++G    E D +  +V+RV +LL  AP DRAWRRRG L++CR  P+R+  R+ TS    + V R TRSR K+     +AG S    T D  T   WA +  +V+ L +EGIFRTIV YL
Sbjct:  254 AGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGES----TVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 3.320e-21
Identity = 83/252 (32.94%), Postives = 108/252 (42.86%), Query Frame = 3 
Query:  549 IDIMKALIEHVVDVNLACALRGAPSLDYAAYNNNVEAIDVLVEAGANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVH---SAGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRVHPERLGLRQNTSHVQESTVLRVTRSRTKLLEREQVAGSSGEGATADGRTAREWAKMAHRVLGL-DEGIFRTIVGYL 1292
            +D ++ LIEH  DV+ A    G  +L +A  NN VEA+DVL+ AGAN ++   +G T L                                     +    AG +G VEVVDLLLRW ADET     G      +G   PE D I    + V KLL  AP DRAWRRR  LVLCR  P+++ L                                         ++   A++  RVLGL +EGIFRTIV ++
Sbjct:  173 VDFIRTLIEHGADVD-ATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL-----------------------------------------SSDRIARLEARVLGLVEEGIFRTIVRFI 382
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.290e-19
Identity = 121/251 (48.21%), Postives = 147/251 (58.57%), Query Frame = 3 
Query:  549 IDIMKALIEHVVDVNLACALRGAPSLDYAAYNNNVEAIDVLVEAGANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHSAGDE-GAVEVVDLLLRWNADETDDDAYGRIPGTIVG-RMAPETDSIFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRVHPERLGLRQNTSHVQESTVLRVTRSRTKLLEREQVAGSSGEGATADGRTAREWAKMAHRVLGLDE-GIFRTIVGYL 1292
            ++I++ LI+H ++VNLA A   A  L +AA  N   AIDVLV AGA+IQA  ++G  PLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    G   G+V+VV LLLRW ADET     G+     +G R  P T+    + +R   LL  AP DRAWRRRG+LVLC  +P+RL                            Q+ G              + A +  RVLGL+E G+FRTIV YL
Sbjct:  183 VEILRMLIDHGMEVNLAAAFGTA--LHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEP--GDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRL----------------------------QLGG--------------DLAGLVDRVLGLEEVGVFRTIVLYL 387
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.510e-15
Identity = 83/252 (32.94%), Postives = 104/252 (41.27%), Query Frame = 3 
Query:  576 HVVDVNLACALRGAPSLDYAAYNNNVEAIDVLVEAGANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHSAGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRVHPE--RLGLRQNTSHVQESTVLRVTRSRTKLLEREQVAGSSGEGATADGRTAREWAKMAHRVLG--------LDEG---IFRTIVGYL 1292
            H  DVN A    G  +L  A+  +   AIDVL EAGANI+A + NG TPL                                       AG  G  E+VDLLLR  ADET     G     +V     E+DS+  +V RV KLL  AP DRAWRRRG L+L R H    R+     TS    + V + TRS                 +    R   +WA +   ++G        + +G   IF  IVGYL
Sbjct:  546 HGGDVN-AKVNNGITALRVASAFDKAPAIDVLTEAGANIEA-QANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRS-----------------SEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: A0A6H5KNN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN1_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.760e-15
Identity = 47/100 (47.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  993 VWKLLQYAPQDRAWRRRGMLVLCRVHPERLGLRQNTSHVQESTVLRVTRSRTKLLEREQVAGSSGEGATADGRTAREWAKMAHRVLGLDEGIFRTIVGYL 1292
            V +LL  AP DRAWRRRG+LVLCR    R  LRQ         + R TRSR KL  R    G+     T +G T  EW   + RV+ L+EGIFR++VG+L
Sbjct:   54 VHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLA-RSDAVGAGCRSGTPEGGTGDEWRSASRRVVELEEGIFRSVVGFL 152
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 8.280e-15
Identity = 64/173 (36.99%), Postives = 83/173 (47.98%), Query Frame = 3 
Query:  555 IMKALIEHVVDVNLACALRGAPSLDYAAYNNNVEAIDVLVEAGANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHSAGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVN---VQRVWKLLQYAPQDRAWRRRGMLVLCR 1064
            +++A+++H VDVN      G  SL  AA NN V AIDVLVEAGA+++    +  TP                                        AG +G   +VD+LLR  ADET  +  GR    +VG    E  +  +N   V+RV  LL+ AP DRAWRRRG LVLCR
Sbjct:  122 VLRAILQHGVDVNRRT--DGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI-EYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCR 291
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BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 9.780e-15
Identity = 64/173 (36.99%), Postives = 83/173 (47.98%), Query Frame = 3 
Query:  555 IMKALIEHVVDVNLACALRGAPSLDYAAYNNNVEAIDVLVEAGANIQATRINGETPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHSAGDEGAVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVNVQ---RVWKLLQYAPQDRAWRRRGMLVLCR 1064
            +++A+++H VDVN      G  SL  AA NN V AIDVLVEAGA+++    +  TP                                        AG +G   +VD+LLR  ADET  +  GR    +VG    E  +  +N Q   RV  LL+ AP DRAWRRRG+LVLCR
Sbjct:  171 VLRAILQHGVDVNRRT--DGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI-EYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCR 340
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1692.4944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G981_ECTSI6.300e-9191.18Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JBC2_9PHAE1.020e-4064.44Reverse transcriptase domain-containing protein n=... [more]
D7FYD0_ECTSI9.850e-2447.37Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KXK5_9PHAE1.000e-2345.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI3.320e-2132.94Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G137_ECTSI1.290e-1948.21Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE1.510e-1532.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNN1_9PHAE2.760e-1547.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI8.280e-1536.99Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE9.780e-1536.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1692contigEcto-sp13_S_contig1692:2230..3908 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score293.9
Seed ortholog evalue7e-77
Seed eggNOG ortholog2880.D7G981
Model size1679
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionsimilar to ankyrin 2,3/unc44
Ec32 orthologEc-13_002950.2
Cds size738
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462886.6119082-UTR-Ecto-sp13_S_contig1692:2229..27861681462886.6119082-UTR-Ecto-sp13_S_contig1692:2229..2786Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1692 2230..2786 +
1681462886.6423073-UTR-Ecto-sp13_S_contig1692:3524..39081681462886.6423073-UTR-Ecto-sp13_S_contig1692:3524..3908Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1692 3525..3908 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462886.6254256-CDS-Ecto-sp13_S_contig1692:2786..35241681462886.6254256-CDS-Ecto-sp13_S_contig1692:2786..3524Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1692 2787..3524 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1692.4944.1prot_Ecto-sp13_S_contig1692.4944.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1692 2787..3524 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1692.4944.1

>prot_Ecto-sp13_S_contig1692.4944.1 ID=prot_Ecto-sp13_S_contig1692.4944.1|Name=mRNA_Ecto-sp13_S_contig1692.4944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
MKALIEHVVDVNLACALRGAPSLDYAAYNNNVEAIDVLVEAGANIQATRI
NGETPLHAAAGKLNFEATLALLKHGADVHALGQTRWTPLHSAVHSAGDEG
AVEVVDLLLRWNADETDDDAYGRIPGTIVGRMAPETDSIFVNVQRVWKLL
QYAPQDRAWRRRGMLVLCRVHPERLGLRQNTSHVQESTVLRVTRSRTKLL
EREQVAGSSGEGATADGRTAREWAKMAHRVLGLDEGIFRTIVGYL*
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mRNA from alignment at Ecto-sp13_S_contig1692:2230..3908+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1692.4944.1 ID=mRNA_Ecto-sp13_S_contig1692.4944.1|Name=mRNA_Ecto-sp13_S_contig1692.4944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1679bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1692:2230..3908+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGACAACGTAAACCTCGCCGGTAGAGGCTTCCAAGAATGGCGATCACGAT
TACTCGCCGCGCGCTGCGGGGGGCAGAGAAGCAGATATTCGACTTCATGG
CACAGACTTGCACACCCGAGCAATGGGCGGCCTGGCTCAGCGCTGCTGTG
TTGAACGCCGCTGACAAAGGAAAGGCAGGCCTCGTACAGAAGCTAGCGAA
GGCAGGAGCAGAGATCGGAGTTGCTATGCACGCGGCGGCGTTGCGCGGCG
ATCAGGAGGTCGCCGACAGTCTGCTGCAGAACGGAGCATCAATCATCGAC
ACCTTTGATGGCTTCACCCCGCTCCACCTTGCTGCTATGCGTGGCAGAAC
GGAGATGGCACGGTGGTTGCTGCTGAAAGGAGCTGAGATAGATGCCGCGG
GCCCAAGAGGGACGACACCTCTTCATTGCTCGATTGAACGCGGGCATGTC
GCCGTAGTAAAACTTCTCCTGGCATCCGGTGCCGACGTTACCGTTCGACA
GGGTGATCATGGTGTCACGCCCTTGGACGCTGCCGTCGACGGTGGTTTAT
CGATATCATGAAAGCTTTGATCGAGCACGTTGTTGATGTCAACTTGGCCT
GCGCCCTGCGTGGTGCGCCTTCGCTGGACTACGCAGCGTACAATAACAAC
GTTGAGGCGATCGACGTCCTCGTGGAGGCGGGGGCCAACATCCAAGCAAC
TCGCATTAATGGCGAGACACCTCTTCATGCGGCTGCAGGCAAGCTTAACT
TTGAGGCGACGCTTGCGCTACTGAAGCACGGCGCAGATGTGCACGCGCTC
GGTCAGACCAGGTGGACTCCGTTACACTCTGCAGTACACTCTGCTGGTGA
CGAAGGCGCTGTGGAGGTAGTGGATCTCCTGCTGAGGTGGAACGCAGACG
AAACAGACGATGATGCCTACGGTCGCATACCCGGCACCATTGTCGGACGC
ATGGCTCCAGAAACGGACAGTATATTCGTGAACGTCCAGCGCGTGTGGAA
GCTATTGCAATACGCTCCGCAAGACAGAGCGTGGCGTCGCCGAGGTATGC
TAGTCCTGTGCCGTGTTCACCCCGAAAGGTTGGGTCTACGGCAGAACACC
AGCCACGTGCAAGAGAGTACGGTGCTGCGGGTAACTCGTAGCCGGACCAA
GTTGCTCGAGAGGGAACAAGTAGCCGGCAGCAGTGGGGAAGGTGCCACGG
CGGATGGCAGAACCGCTCGCGAGTGGGCCAAGATGGCGCACAGGGTCCTT
GGGTTGGACGAAGGCATCTTTCGGACGATTGTAGGGTATTTGTGATTTCG
ATGAAATTAGTTGCTTGAGTCTTCTCATGCTCGGGCTGGGTTTTGGCCAT
GCACTACAATAGTGCAGACTGGTGGGCATGCCTTTGTTTTTTTTCGTGTT
TTTTTCTGTATCGTAACGCACTACAGAGGCACGTTGGTGTGATGATTGTG
CCACTAGAAATTGTTCATCAACCTACCTTGTATCGTCGCCGTTGATGATG
ATCTGATCGCGGACAAAACTCCATCGGCTACCTCCGCTGGAAGTAGTTGG
TCCACGTGATACCCTCGTCACTGGTTGGAGCTCTCGCGGTGATCAACCTC
TCTGGACGTGGCAATGTGCACACAGTAGTTCGGATCGAACCTCGGCTCAA
TGGATGGTAACGTGACACATGAATTGGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1692:2230..3908+

>mRNA_Ecto-sp13_S_contig1692.4944.1 ID=mRNA_Ecto-sp13_S_contig1692.4944.1|Name=mRNA_Ecto-sp13_S_contig1692.4944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=738bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1692:2230..3908+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAAGCTTTGATCGAGCACGTTGTTGATGTCAACTTGGCCTGCGCCCT
GCGTGGTGCGCCTTCGCTGGACTACGCAGCGTACAATAACAACGTTGAGG
CGATCGACGTCCTCGTGGAGGCGGGGGCCAACATCCAAGCAACTCGCATT
AATGGCGAGACACCTCTTCATGCGGCTGCAGGCAAGCTTAACTTTGAGGC
GACGCTTGCGCTACTGAAGCACGGCGCAGATGTGCACGCGCTCGGTCAGA
CCAGGTGGACTCCGTTACACTCTGCAGTACACTCTGCTGGTGACGAAGGC
GCTGTGGAGGTAGTGGATCTCCTGCTGAGGTGGAACGCAGACGAAACAGA
CGATGATGCCTACGGTCGCATACCCGGCACCATTGTCGGACGCATGGCTC
CAGAAACGGACAGTATATTCGTGAACGTCCAGCGCGTGTGGAAGCTATTG
CAATACGCTCCGCAAGACAGAGCGTGGCGTCGCCGAGGTATGCTAGTCCT
GTGCCGTGTTCACCCCGAAAGGTTGGGTCTACGGCAGAACACCAGCCACG
TGCAAGAGAGTACGGTGCTGCGGGTAACTCGTAGCCGGACCAAGTTGCTC
GAGAGGGAACAAGTAGCCGGCAGCAGTGGGGAAGGTGCCACGGCGGATGG
CAGAACCGCTCGCGAGTGGGCCAAGATGGCGCACAGGGTCCTTGGGTTGG
ACGAAGGCATCTTTCGGACGATTGTAGGGTATTTGTGA
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