mRNA_Ecto-sp13_S_contig1689.4923.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: D8LMK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK2_ECTSI) HSP 1 Score: 225 bits (574), Expect = 4.900e-68 Identity = 149/269 (55.39%), Postives = 163/269 (60.59%), Query Frame = 3
Query: 57 AQLCFLGASVGASAASVAVRRPVLESAEAAADSLVGTDWRNGCF*HVHREMMRAEQVILGPPTRWLSMRATAGRGKTSKGTSCGTTQCEGSATTARPAPKRSRP*ENLRRNGPSCPRRASTCSSDRTTGPG----EFS---------WIGGALRSHGRVNRQKHLHEDRVREYKSLLGVTDGFSGPTADAIKPEAAASGLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNNLRKQYTEGSTMQETGCPE 824
A + LGA VG SAASVAV RPVLESAEAAAD LV T W NGCF HV REM+RAEQ ILG T L+ + AG G K G C N+R G +A T P EFS + GA GR+ + +DR EY+SLLGV G SGP AD IK EAAA GL LREGNGGDPDTLMR+TVFVMDTATF FFKGEIYHQFHN+MSEDY R+YNNLRKQY E TMQETGCPE
Sbjct: 49 AAIGILGAGVGISAASVAVGRPVLESAEAAADPLVETYWGNGCFWHVQREMIRAEQAILGRSTDELT--SYAGYGGAKKNFQ-GDKLCY----------------HNMRGIGDYG--KAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGA----GRIFMDRRDPQDRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPE 292
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: A0A6H5JGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT1_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 2.700e-21 Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = 3
Query: 519 DRVREYKSLLGVTDGFSGPTADAIKPEAAASGLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNNLRKQYTEGSTMQETGCPE 824
DR EY+SL+GV SGP +P ++ + + D + VM+ ATF FFKG+IYHQFHN+MSEDY R+YNNLRKQY E TMQET CPE
Sbjct: 13 DRGVEYRSLVGVPGDTSGPDDIEKRPGGDHDRDIIIPPHPRNTDVCVLFEGVVMNRATFPFFKGKIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETDCPE 114
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: A0A7S0Q9J3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0Q9J3_9CRYP) HSP 1 Score: 99.4 bits (246), Expect = 1.490e-20 Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 3
Query: 492 VNRQKHLHEDRVREYKSLLGVTDGFSGPTADAIKPEAAASGLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNNLRKQYTEGSTMQETGCP 821
V+ ++ +DR EY+S++G+ G S P A + EAAA G+ L G GGDPDTL R TV+V D+ F +GE++HQFH++MSE Y YN LR + TGCP
Sbjct: 121 VDGERADPQDRGPEYRSIIGLPGGMSSPDFPAFQAEAAARGMTLARGAGGDPDTLGRRTVYVYDSDAFPLHQGEVFHQFHDDMSERYGAAYNALRGGAVRRGALVPTGCP 230
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: A0A7S0EBK8_9CRYP (Peptide-methionine (S)-S-oxide reductase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EBK8_9CRYP) HSP 1 Score: 89.4 bits (220), Expect = 1.130e-16 Identity = 39/96 (40.62%), Postives = 65/96 (67.71%), Query Frame = 3
Query: 492 VNRQKHLHEDRVREYKSLLGVTDGFSGPTADAIKPEAAASGLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNNLRK 779
+N ++ +DR EY+S++G+ G GP A ++K A+A+GL L G G + DTL + ++V D+A F F E+YHQFH++M + YS+EY++L++
Sbjct: 170 INGERADPQDRGGEYRSIVGIPGGMDGPFAQSLKAAASANGLNLVAGQGNEGDTLGKKLIYVYDSAQFPFHPAEVYHQFHDDMVDKYSKEYHDLKR 265
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: L1JFW7_GUITC (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFW7_GUITC) HSP 1 Score: 89.0 bits (219), Expect = 2.940e-16 Identity = 39/96 (40.62%), Postives = 64/96 (66.67%), Query Frame = 3
Query: 492 VNRQKHLHEDRVREYKSLLGVTDGFSGPTADAIKPEAAASGLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNNLRK 779
+N ++ +DR EY+SL+G+ G GP A+++K A++ GL L G G + DTL + ++V D+ F F E+YHQFH++M + YSREY++L++
Sbjct: 168 INGERADPQDRGGEYRSLVGIPGGMDGPFAESLKAAASSRGLTLVAGKGNEGDTLGKKLIYVYDSVQFPFHPAEVYHQFHDDMVDKYSREYHDLKR 263
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: A0A7S3TUX2_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TUX2_9SPIT) HSP 1 Score: 82.4 bits (202), Expect = 2.350e-15 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 3
Query: 516 EDRVREYKSLLGVTDGFSGPTADAIKPEAAASGLM-LREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNNLRKQYTEGSTMQETGCPE 824
+DR EY+S +G+ G GP + EAA +G M L G G D DT+ V+V D+ F F++GE+YHQFH++M E YS+ Y+ L+ G + + CPE
Sbjct: 38 QDRGGEYRSAIGIPGGMDGPLFKEV--EAANAGRMELVRGQGNDGDTVATKKVWVYDSNKFPFYQGEVYHQFHDDMGERYSKAYHGLKDTMLTGGAINKVQCPE 139
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: A0A8J5XES5_DIALT (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XES5_DIALT) HSP 1 Score: 85.1 bits (209), Expect = 3.970e-15 Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 3
Query: 516 EDRVREYKSLLGVTDGFSGPTADAIKPEAAASGLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEM-SEDYSREYNNLRKQYTEGSTMQETGCP 821
+DR EY+S+LG+ G I+ A + + L EG G +PDTL++ TV+VMD+ F FF E YHQFHN+ S Y R YN+LR+Q + + +TGCP
Sbjct: 170 QDRGPEYRSVLGLPGGVRSVYFAQIE-RANGNKMKLVEGKGDEPDTLLKRTVYVMDSDEFPFFPAEPYHQFHNDFQSPPYGRVYNDLRQQLADAGKLPDTGCP 271
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: A0A7S0C3B6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3B6_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.120e-14 Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 3
Query: 519 DRVREYKSLLGVTDGFSGPTADAIKPEAAASGLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSE-DYSREYNNLRKQYTEGSTMQETGCP 821
DR EY+S+LG+ +GF+ + A + GL L G G D DTL + V+VMD+ F F + E+YHQ+HN+ Y ++YN+L ++ T+ + T CP
Sbjct: 50 DRGPEYRSVLGIPNGFANAAYSILDATAKSHGLTLSIGEGNDADTLGKHVVYVMDSLKFPFHQAEVYHQYHNDFKGLPYGKKYNSLAREATKDGRLAHTNCP 151
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: A0A813JAL1_POLGL (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JAL1_POLGL) HSP 1 Score: 79.7 bits (195), Expect = 1.420e-12 Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query: 531 EYKSLLGVTDGFSGPTADAIKPEAAAS--GLMLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNNLRKQYTEGSTMQETGCPE 824
EY+S+LG+ G P +K +AS L L G G DPDTL+ V++ D+ ++FF+ EIYHQFH++M + Y Y++L+ Q + +++ CP+
Sbjct: 421 EYRSVLGLPGGVESPLFAQVKEARSASLERLKLVAGRGSDPDTLLGSKVYIYDSDKYSFFQAEIYHQFHDDMLQQYDDSYHSLKTQLKQTGKLKDVSCPD 520
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Match: D8LMK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK3_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 2.680e-11 Identity = 32/43 (74.42%), Postives = 33/43 (76.74%), Query Frame = 2
Query: 233 RSTDALAFYAGYGGARKNFQGDKLWYNTM*GIGDYGKAGAEEV 361
R TDALA Y GYGGA KN QGDKLWYN M GIG YG+AGA E
Sbjct: 15 RFTDALASYTGYGGAMKNLQGDKLWYNNMLGIGAYGEAGAGET 57 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1689.4923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1689.4923.1 >prot_Ecto-sp13_S_contig1689.4923.1 ID=prot_Ecto-sp13_S_contig1689.4923.1|Name=mRNA_Ecto-sp13_S_contig1689.4923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp MLREGNGGDPDTLMRDTVFVMDTATFTFFKGEIYHQFHNEMSEDYSREYNback to top mRNA from alignment at Ecto-sp13_S_contig1689:10372..14461- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1689.4923.1 ID=mRNA_Ecto-sp13_S_contig1689.4923.1|Name=mRNA_Ecto-sp13_S_contig1689.4923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4090bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1689:10372..14461- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1689:10372..14461- >mRNA_Ecto-sp13_S_contig1689.4923.1 ID=mRNA_Ecto-sp13_S_contig1689.4923.1|Name=mRNA_Ecto-sp13_S_contig1689.4923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=210bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1689:10372..14461- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |