mRNA_Ecto-sp13_S_contig1688.4915.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: D8LB26_ECTSI (ELMO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB26_ECTSI) HSP 1 Score: 797 bits (2059), Expect = 1.960e-284 Identity = 426/484 (88.02%), Postives = 432/484 (89.26%), Query Frame = 1
Query: 1 MFPFEGTFHFRLKVPDANGLSDYCWIDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDLGGPVEQEAAENAPAEAAAAHDFYAGQGVGVAHGPGLGLDAPGARGQATADEDLAAGVSGMDIGGEERFDVGDDSCSGTRAARERRGERSFEVDEYXXXXXXXXXXXXXXXXXRSPVGGGSRGEYXXXXXRGDRGRGYGDEGGDDGHDRRYRGXXXXXXXXXXXXNWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 1452
MFPFEGTFHFRLKVPDANGLSDYCW+DLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPID GGPVE EAAENAPAEA A DFYAG+GVGVAHGPGLGLDAPGARGQATADEDLA+GVSGMDIGG ERFDVGD S SGTR ARERRGERSF+VD XXXXXXXXXXXXXXXXXRSPVGGGSRGE+ YG XX WKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENL ELANFLGTPFSAT+REHVNDLGKVWMCLFPDDEFEG ESPRWQEAGFQE NVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAG SSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR
Sbjct: 45 MFPFEGTFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFYAGEGVGVAHGPGLGLDAPGARGQATADEDLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERSFDVDXXXXXXXXXXXXXXXXXXXRSPVGGGSRGEHGDGGRXXXXXXXYGXXXXXXXXXXXXXXXXGAYGDDDEDDTWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 528
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: A0A6H5KWK7_9PHAE (ELMO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK7_9PHAE) HSP 1 Score: 561 bits (1446), Expect = 4.090e-194 Identity = 325/360 (90.28%), Postives = 330/360 (91.67%), Query Frame = 1
Query: 379 MDIGGEERFDVGDDSCSGTRAARERRGERSFEVDEYXXXXXXXXXXXXXXXXX--RSPVGGGSRGEYXXXXXRGDRGRGYGDEGGDDGHDRRYRGXXXXXXXXXXXXNWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 1452
MDIGG +RFDVG+DS SGTRAARE RG RSFEVD XXXXXXXXXXXXXXXXX + PVGG S GEY XXXX DDGHDRRYR XXXXXXXXXXXX WKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENL ELANFLGTPFSAT+REHVNDLGKVWMCLFPD+EFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQS G SSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR
Sbjct: 1 MDIGGGQRFDVGNDSGSGTRAAREGRGGRSFEVDXXXXXXXXXXXXXXXXXXXXXKRPVGGRSSGEYGXXXXXXXXXXXXXXXXDDDGHDRRYREXXXXXXXXXXXXXWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDEEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSVGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGMLR 360
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: A0A835YT59_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT59_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.960e-52 Identity = 173/516 (33.53%), Postives = 226/516 (43.80%), Query Frame = 1
Query: 1 MFPFEGTFHFRLKVPDANGLSDYCWIDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDLGGPV---------------EQEAAENAPAEAAAAHDFYAGQGVGVAHGPGLGLDAPGARGQATAD---EDLAAGVSGMDIGGEERFDVGDDSCSGTRAARERRGERSFEVDEYXXXXXXXXXXXXXXXXXRSPVGGGSRGE----------YXXXXXRGDRGRGYGDEGGDDGHDRRYRGXXXXXXXXXXXXNWKASVVNQASQGVKDFQKKTSQVAKTMGFG-AKKMWNAINKGV---GGP-VVPSEEAMENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDE----FEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEE 1437
+FP+ GTFHFRLKV D G + + W+DLT +GDDI+ELA NLGG+E G H + VH+K+LP+ PV ++ + APA AAAAH P ++ R A D E G GG R + S G R R G SP ++ XXXX RG G + + GD HD W ASV + + + + + A G G A+K + INKG GGP +P A+ L +L++ L TPF+ R H L ++W LFPD G SPRW+EAGFQ +V D TG L L+ MV D AL A A YP+AVVA N+TLMLADVL + + +R YWG+F+R AF ++FC AFR LD WAER A R FGQ L S P + AF+ +A +
Sbjct: 38 LFPYCGTFHFRLKVADNVGTAPHVWLDLTQEGDDIVELARNLGGIERAPRGSH--EVVHVKVLPLSFDAPVLNGSDALPPDQIFDWNEDVSAAAPAAAAAAHV------------PAYNVEDAFVRAAAARDDAREFAEPPYLGSSGGGASRSTL-HASAQGQRHVRRPSGGXXXXXXXAEGGSGHCRRPLGSSEHAVSPFDSPAQRRPSQXXXXXXXXXXXXRRGSGGMEF--QQGD--HD-------------DSAQTWTASVNSTITSAINSRAAQDLKQAAKFGLGNARKFLSKINKGGAGGGGPSTLPPVSALATLDDLSHHLETPFNDGVRSHFELLSRLWGLLFPDAPPLAGNGGAVSPRWREAGFQADSVDGDLDHTGTLCLRCMVTLLSSADAPALLRANAARA-PPRRYPFAVVARNVTLMLADVLRLGGRGYCEARASYWGLFERADAFEQLFCWAFRRLDAVWAERNASRDAFGQXXXXXXXXXXXALGSGPETVAAFLERAAQ 520
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: L8H196_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H196_ACACA) HSP 1 Score: 105 bits (263), Expect = 6.240e-20 Identity = 59/187 (31.55%), Postives = 91/187 (48.66%), Query Frame = 1
Query: 862 LRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVF-DRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAF 1419
L EL N EH L K+W +FPD E S +W+ GFQ + + D RG G+L L ++++ + + K + QS YP AV NLT ML ++L + K + +F D AF E++C+AF++LDHTWA+ A ++ +I + I ++L NP + F
Sbjct: 291 LWELQQLSDIAHDKENEEHEKMLLKLWSLVFPDTVLESRVSKQWKTMGFQGTDPATDLRGMGLLGLSNLLYMAEFHSDKLRKIIAVQSERKDHDYPVAVAGINLTKMLYELLHIGTED---PTKPIFNIFFDHAHAFEEMYCIAFQVLDHTWADMNASYMDWSNVIAAVRKQISDVLAQNPATIEMF 474
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: A0A1Y1HQQ4_KLENI (ELMO/CED-12 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQQ4_KLENI) HSP 1 Score: 95.5 bits (236), Expect = 9.460e-18 Identity = 57/189 (30.16%), Postives = 97/189 (51.32%), Query Frame = 1
Query: 847 EAMENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSS-HYPWAVVANNLTLMLADVLEMRAN----QFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESN 1398
E E LR A+ PFS+T+ H L K+W +P + G+ S +W+E G+Q + S DFRG G ++L+++++F +++ R L + + + YP+AV NL+ ML D+L+++A + A R + D AF ++ AF LLD W A F ++ ++ + LL S+
Sbjct: 126 ERFERLRARASV---PFSSTSPSHQEALQKLWRLAYPHQQLTGMVSEQWKEMGWQGTDPSTDFRGGGFISLENLLYFAEKHPRDFQRLLKKEDGERAQWEYPFAVAGLNLSFMLVDLLDLKAEDGVPRSAPGRGFLRFLEDDDSAFDALYVRAFLLLDAEWLRMRASYMEFNVVMKAVRAKLEHLLSSS 311
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: A0A833X553_JUGRE (ELMO domain-containing protein n=8 Tax=Juglandaceae TaxID=16714 RepID=A0A833X553_JUGRE) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-17 Identity = 50/175 (28.57%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 856 ENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLC-RAQSAGSSSHYPWAVVANNLTLMLADVLEMRA--NQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKS 1371
+ L+ L L PF T+ +H L +W FP+ +G+ S +W++ G+Q PN S DFRG G ++L++++FF + Y L + + ++ YP+AV N++ ML +L++ + + + + GAF E+FC+AF ++D W A F +++ T++
Sbjct: 78 QRLQRLQERLQVPFDETHLDHQEALKTLWRAAFPNIALKGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARTYPESFHRLLFKREGIRAAWEYPFAVAGINVSFMLIQMLDLSSVKPRCLPGINFIKLLGEDEGAFDELFCIAFEMMDAQWLAMHASYMEFNEVLQATRT 252
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: UPI001C360816 (Uncharacterized protein n=4 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C360816) HSP 1 Score: 94.4 bits (233), Expect = 1.680e-17 Identity = 51/175 (29.14%), Postives = 90/175 (51.43%), Query Frame = 1
Query: 856 ENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSS-HYPWAVVANNLTLMLADVLEMRA--NQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKS 1371
+ L+ L L PF T +H L +W FP+ +G+ S +W++ G+Q PN S DFRG G ++L++++FF + Y L Q ++ YP+AV N++ ML +L++ + + + + GAF E+FC+AF ++D W A F +++ T++
Sbjct: 102 QRLQRLQERLQVPFDETQLDHQEALKTLWHAAFPNIPLKGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARTYPESFHRLLFKQEGKRAAWEYPFAVAGINVSFMLIQMLDLSSVKPRCLPGINFIKLLGEDEGAFDELFCIAFEMMDAQWLAMHASYMEFNEVLQVTRT 276
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: A0A2D4BH07_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH07_PYTIN) HSP 1 Score: 95.5 bits (236), Expect = 2.170e-16 Identity = 58/211 (27.49%), Postives = 91/211 (43.13%), Query Frame = 1
Query: 829 PVVPSEEAMENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGV----ESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSSH-YPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGM 1446
P+ P + M+ L L P + + L +W ++ D G+ P W GFQ P+ + DFR G+L+LK +V+F + Y A + Q GS S+ YPW N+T MLA R+ W F + A + +F F L DH W E A F +++ T V++E L+ +L F+ + +
Sbjct: 2566 PLEPYQSTMQGYYAL---LKQPCVTDDPSYEELLKNMWNAMYTRDSAAGMAFERSGPSWSRLGFQRPDPTTDFRAGGMLSLKCLVYFAENYYEHASRMVEHQVPGSRSNTYPWGPAGINITCMLARTFWSVDGCLYKERQYNWPFFADKSALYIMFSEVFLLFDHLWDEMNAHYGIFSEVMQSTTGVVLEALDEAKGDLQTFLVEIRAQSL 2773
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: A0A024UEY2_9STRA (ELMO domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEY2_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 4.450e-12 Identity = 65/225 (28.89%), Postives = 107/225 (47.56%), Query Frame = 1
Query: 748 KKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVESPRW-QEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAE-RG----AKRSNFGQI-IGYTKSVIVELLESNP 1401
K T++V +T+ F A + + + + G PS A++ L ++ FS +NREH++ L ++W L D F SP W +E GF + + GVL L ++ FF + R A R YP+A+V N+ +L +VL++ + +F + YW VF+ +E+F ++F D W + RG A+ F I TK + LL +P
Sbjct: 154 KTTAKVWETVEFTAGRYFGSQS----GAEKPSAAALQQLAAGSSLSRIYFSDSNREHMDQLRRLWGALAGDAPFART-SPTWIKEGGFPSEDPGATLKSCGVLGLYALAFFTDVH-RSASEDMR------HGGYPYAMVGLNVASILVEVLDLDSGRFLERDEVYWKVFEDPIGLYELFSVSFHAYDTFWKQSRGGSTAARDRTFQPTPIDLTKQFVCRLLMQSP 366
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Match: W4H3L4_9STRA (ELMO domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3L4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 8.860e-11 Identity = 52/200 (26.00%), Postives = 96/200 (48.00%), Query Frame = 1
Query: 748 KKTSQVAKTMGFGAKKMWNAINKGVGGPVVPSEEAMENLRELANFLGTPFSATNREHVNDLGKVWMCLFPDDEFEGVE-SPRW-QEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGSSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSN 1341
K T++V +T+ F A + + + + G P+ A++NL + TPFS +NR+H++ + ++W + D SP W E GF + F+ GVLAL ++ FF + + + R Y +A + +L +VL++ + +F + YW VF+ ++E+F +AF W ++G S+
Sbjct: 160 KTTAKVWETVEFTAGRYFGSQS----GAEKPTAAALQNLAAASALSRTPFSDSNRDHMDQIRRLWGAVVGDSGRPFARTSPVWVDEGGFPSDDPGATFKAHGVLALHALAFFTDVHRSASDEMRRGG-------YAYATEGLQVVSILVEVLDLDSGRFLERDEVYWKVFEDPIGWYELFSVAFHAHHTFWRQQGKGASS 348 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1688.4915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1688.4915.1 >prot_Ecto-sp13_S_contig1688.4915.1 ID=prot_Ecto-sp13_S_contig1688.4915.1|Name=mRNA_Ecto-sp13_S_contig1688.4915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=485bp MFPFEGTFHFRLKVPDANGLSDYCWIDLTTDGDDILELAENLGGLEGGNSback to top mRNA from alignment at Ecto-sp13_S_contig1688:3438..11379+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1688.4915.1 ID=mRNA_Ecto-sp13_S_contig1688.4915.1|Name=mRNA_Ecto-sp13_S_contig1688.4915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7942bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1688:3438..11379+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1688:3438..11379+ >mRNA_Ecto-sp13_S_contig1688.4915.1 ID=mRNA_Ecto-sp13_S_contig1688.4915.1|Name=mRNA_Ecto-sp13_S_contig1688.4915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1455bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1688:3438..11379+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |