mRNA_Ecto-sp13_S_contig16875.4914.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: A0A6H5KUW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW1_9PHAE) HSP 1 Score: 286 bits (733), Expect = 7.660e-94 Identity = 139/150 (92.67%), Postives = 146/150 (97.33%), Query Frame = 3
Query: 3 VKEAMGGSEEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTDQDNWRHLKWLDKSTVAALSIRGGVCTLSYDPETAAAKPTAKSSGNSATE 452
VKEAMGGS EFEHLGK+AWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPE+AE+GGHTKEITIAAFSPDGGRHLATAALDGR+VVWDVEE+LAVKTFVNTDQ+NWRHLKWLDKSTVAALSI GGVCTLSY+P TAAAKPT KSSGNSATE
Sbjct: 211 VKEAMGGSAEFEHLGKLAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPENAEDGGHTKEITIAAFSPDGGRHLATAALDGRLVVWDVEERLAVKTFVNTDQENWRHLKWLDKSTVAALSIGGGVCTLSYNPVTAAAKPTGKSSGNSATE 360
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: D7G152_ECTSI (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI) HSP 1 Score: 293 bits (750), Expect = 6.560e-91 Identity = 148/164 (90.24%), Postives = 155/164 (94.51%), Query Frame = 3
Query: 3 VKEAMGGSEEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTDQDNWRHLKWLDKSTVAALSIRGGVCTLSYDPETAAAKPTAKSSGNSATE---DAGEEAADRQA 485
VKEA+GGS EFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPE+AE+GGHTKEITIAAFSPDGG+HLATAALDGRVVVW+VE+KLAVKTFVNTDQ+NWRHLKWLDKSTVAALSI GGVCTLSYDP TAAAKPT KS GNSATE DAGEE ADRQA
Sbjct: 201 VKEAIGGSAEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPENAEDGGHTKEITIAAFSPDGGQHLATAALDGRVVVWNVEDKLAVKTFVNTDQENWRHLKWLDKSTVAALSIGGGVCTLSYDPVTAAAKPTEKSCGNSATEYLKDAGEEPADRQA 364
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: A0A0A1TGH1_9HYPO (Mcl1_mid domain-containing protein n=1 Tax=Torrubiella hemipterigena TaxID=1531966 RepID=A0A0A1TGH1_9HYPO) HSP 1 Score: 64.7 bits (156), Expect = 3.900e-9 Identity = 35/110 (31.82%), Postives = 59/110 (53.64%), Query Frame = 3
Query: 48 KVAWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTDQDNWRHLKWLDKSTVAALSIRGG 374
KV WHPDG++ +V T D ++ ++ W++ P GH +IT A+SP+G LA+AA DG+V+VW+ + + ++ + D N LKW + + + G
Sbjct: 196 KVVWHPDGRAFAVPTPTRDIQIISKNDWEKQQAFPS-----GHNADITALAWSPNGAM-LASAAKDGKVIVWETKSQSVLQRY---DFRNVIDLKWHPTKNILSFTTTDG 296
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: A0A2S7YA23_BEABA (Mcl1_mid domain-containing protein n=5 Tax=Beauveria TaxID=5581 RepID=A0A2S7YA23_BEABA) HSP 1 Score: 61.2 bits (147), Expect = 6.210e-8 Identity = 33/110 (30.00%), Postives = 60/110 (54.55%), Query Frame = 3
Query: 48 KVAWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTDQDNWRHLKWLDKSTVAALSIRGG 374
K AWHPDG++ +V T D ++ ++ W++ + E GH +IT A+SP+G LA+AA DG+++VWD + + ++ + + N L W + + + + G
Sbjct: 197 KAAWHPDGRAFAVPTPTRDIQVISKNDWEK-----QRCFENGHMGDITALAWSPNGAM-LASAAKDGKILVWDTKTQAVLQRY---NFSNVIDLCWHPRKNILSFTTTDG 297
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: A0A0G4KWF3_9PEZI (Mcl1_mid domain-containing protein (Fragment) n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4KWF3_9PEZI) HSP 1 Score: 58.9 bits (141), Expect = 3.680e-7 Identity = 29/81 (35.80%), Postives = 51/81 (62.96%), Query Frame = 3
Query: 54 AWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 293
AWHPDG++L++ T D ++ ++ W++ + A GH +IT A+SP+G LATAA DG+V++W+ + + ++ F
Sbjct: 116 AWHPDGRALALPTPTHDIQVVSKNDWEK-----QRAFSNGHLGDITALAWSPNGAL-LATAAKDGKVLIWETKTQSVIQKF 190
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: E3QGZ0_COLGM (WD domain-containing protein n=24 Tax=Colletotrichum TaxID=5455 RepID=E3QGZ0_COLGM) HSP 1 Score: 58.5 bits (140), Expect = 5.300e-7 Identity = 29/89 (32.58%), Postives = 53/89 (59.55%), Query Frame = 3
Query: 30 EFEHLGKVAWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 293
+ E ++ WHPDG++ +V T D ++ ++ W++ + A GH +IT A+SP+G LATAA DG++++W+ + + V+ F
Sbjct: 190 DSETSARIVWHPDGRAFAVPTPMHDVQVVSKNDWEK-----QRAFANGHLGDITALAWSPNGAL-LATAAKDGKLLIWETKTQSVVQKF 272
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: A0A6G1NZI9_VERDA (Mcl1_mid domain-containing protein n=1 Tax=Verticillium dahliae VDG1 TaxID=1027910 RepID=A0A6G1NZI9_VERDA) HSP 1 Score: 57.8 bits (138), Expect = 9.760e-7 Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 3
Query: 48 KVAWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 293
+ WHPDG++L++ T D ++ ++ W++ + A GH +IT A+SP+G LATAA DG+V++W+ + + ++ F
Sbjct: 195 EAVWHPDGRALALPTPTHDIQVVSKNDWEK-----QRAFSNGHLGDITALAWSPNGAL-LATAAKDGKVLIWETKTQSVIQKF 271
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: G2XBF8_VERDV (Minichromosome loss protein n=7 Tax=Verticillium TaxID=1036719 RepID=G2XBF8_VERDV) HSP 1 Score: 57.8 bits (138), Expect = 9.790e-7 Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 3
Query: 48 KVAWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 293
+ WHPDG++L++ T D ++ ++ W++ + A GH +IT A+SP+G LATAA DG+V++W+ + + ++ F
Sbjct: 195 EAVWHPDGRALALPTPTHDIQVVSKNDWEK-----QRAFSNGHLGDITALAWSPNGAL-LATAAKDGKVLIWETKTQSVIQKF 271
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: A0A0G4M902_9PEZI (Mcl1_mid domain-containing protein n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4M902_9PEZI) HSP 1 Score: 57.8 bits (138), Expect = 9.990e-7 Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 3
Query: 48 KVAWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 293
+ WHPDG++L++ T D ++ ++ W++ + A GH +IT A+SP+G LATAA DG+V++W+ + + ++ F
Sbjct: 195 EAVWHPDGRALALPTPTHDIQVVSKNDWEK-----QRAFSNGHLGDITALAWSPNGAL-LATAAKDGKVLIWETKTQSVIQKF 271
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Match: A0A2J6T0B9_9HELO (Chromosome segregation protein-like protein n=3 Tax=Hyaloscypha hepaticicola/Rhizoscyphus ericae species complex TaxID=186449 RepID=A0A2J6T0B9_9HELO) HSP 1 Score: 57.0 bits (136), Expect = 1.800e-6 Identity = 31/93 (33.33%), Postives = 50/93 (53.76%), Query Frame = 3
Query: 30 EFEHLGKVAWHPDGKSLSV-TGAADPLMLMRDSWKRSIIVPEDAEEGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTD 305
E E KV WHPDG++ + T D ++ R W+ + GH +IT A+SP+G LA+AA DG+V++W+ + + + T+ D
Sbjct: 190 EDEISSKVVWHPDGRAFAAPTATRDIQVMSRGDWEN-----QRTFTSGHDGDITALAWSPNGAM-LASAAKDGKVLLWETKTQKMLATYDYAD 276 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16875.4914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16875.4914.1 >prot_Ecto-sp13_S_contig16875.4914.1 ID=prot_Ecto-sp13_S_contig16875.4914.1|Name=mRNA_Ecto-sp13_S_contig16875.4914.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp MGGSEEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPEDAEEback to top mRNA from alignment at Ecto-sp13_S_contig16875:557..3025+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16875.4914.1 ID=mRNA_Ecto-sp13_S_contig16875.4914.1|Name=mRNA_Ecto-sp13_S_contig16875.4914.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2469bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16875:557..3025+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16875:557..3025+ >mRNA_Ecto-sp13_S_contig16875.4914.1 ID=mRNA_Ecto-sp13_S_contig16875.4914.1|Name=mRNA_Ecto-sp13_S_contig16875.4914.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16875:557..3025+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |