prot_Ecto-sp13_S_contig16868.4910.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig16868.4910.1
Unique Name	prot_Ecto-sp13_S_contig16868.4910.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	106

Homology

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 3.750e-59
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMGQD 106
            GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKT+GED+SGQVALGTFHSICARLLRRHGDALPAVVPGLD RFSIFDTEDSRRLLTDIIKEMGQD
Sbjct:  110 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTVGEDVSGQVALGTFHSICARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTDIIKEMGQD 215

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A6I7PMM4_9BACT (DNA helicase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6I7PMM4_9BACT)

HSP 1 Score: 112 bits (279), Expect = 1.620e-26
Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQ--VALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMG 104
            GKTRV+TRRIAHLVR +G PAWSILA+TFT KA+ EMR RV   LGED      + + TFHS+CARLLRR+ D L   VPGLD+ +SI+D+ D   L+  +I ++G
Sbjct:   71 GKTRVITRRIAHLVR-MGVPAWSILALTFTNKAAGEMRERVGVLLGEDTRAARGLTVATFHSLCARLLRRYADLLR--VPGLDASYSIYDSADQASLMKRVIVDIG 173

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A399Z6V0_9CHLR (DNA helicase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A399Z6V0_9CHLR)

HSP 1 Score: 105 bits (263), Expect = 6.950e-26
Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMGQD 106
            GKTRVLT+R+A L+ + G   + ILAVTFT KA+ EM +RV+  LGED +  + LGTFH+ICARLLRR  + LP     ++S F IFD +D  R++  IIKE   D
Sbjct:   31 GKTRVLTQRVAWLIASEGVRPYQILAVTFTNKAAREMESRVQSLLGEDATQGMMLGTFHAICARLLRREAELLP-----VESNFVIFDADDQERIVKSIIKEFNLD 131

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A349BUE5_9FLAO (DNA helicase (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A349BUE5_9FLAO)

HSP 1 Score: 103 bits (256), Expect = 1.420e-25
Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMGQD 106
            GKTRVLT RIAHL+ + G  ++SILA+TFT KA+ EM++R+ + +GE  +  + +GTFHS+ AR+LR  G+ L     G  S F+I+DT+DS RL+  IIKEMG D
Sbjct:   36 GKTRVLTYRIAHLMAS-GVDSFSILALTFTNKAAREMKSRIAELVGEGEAKNLWMGTFHSVFARILRHEGEKL-----GFPSNFTIYDTQDSDRLIASIIKEMGLD 135

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A3N5UTJ7_9CHLR (DNA helicase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UTJ7_9CHLR)

HSP 1 Score: 106 bits (264), Expect = 1.420e-25
Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMG 104
            GKTRVLT+RIA+L+   G   W ILAVTFT KA++EM+ARV+  L +     + LGTFHSICAR+LRR  + LP     ++S F IFDT+D  R++  +I+EM 
Sbjct:   31 GKTRVLTQRIAYLIAVEGVRPWQILAVTFTNKAAKEMQARVKSLLPDQAIEGIMLGTFHSICARILRREAEHLP-----IESNFVIFDTDDQERIVKTVIREMN 129

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A363U1S3_9CHLR (DNA helicase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363U1S3_9CHLR)

HSP 1 Score: 108 bits (270), Expect = 2.700e-25
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMG 104
            GKTRVLT+RIA+L+   G   W ILAVTFT KA++EM+ RVRK L +     + LGTFHSICAR+LRR  D LP     ++S F IFD++D  RL+  +I+E+ 
Sbjct:   31 GKTRVLTQRIAYLIAEEGVRPWQILAVTFTNKAAKEMQERVRKLLPDQAIEGIMLGTFHSICARILRREADHLP-----IESNFVIFDSDDQERLVKSVIRELN 129

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A850BW17_9CHLR (DNA helicase (Fragment) n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A850BW17_9CHLR)

HSP 1 Score: 102 bits (255), Expect = 7.040e-25
Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMG 104
            GKTRVLT+RIA+L+   G   W ILAVTFT KA++EM+ RV++ L +     + LGTFHSIC R+LRR  + LP     + S F IFDT+D  R++  +I+E+ 
Sbjct:   31 GKTRVLTQRIAYLIAEEGVRPWQILAVTFTNKAAKEMQERVKRLLPDQAIEGIMLGTFHSICGRILRREAEHLP-----IQSNFVIFDTDDQERVVKSVIRELN 129

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A1F3B8X6_9BACT (DNA helicase n=1 Tax=Armatimonadetes bacterium RBG_19FT_COMBO_69_19 TaxID=1797289 RepID=A0A1F3B8X6_9BACT)

HSP 1 Score: 107 bits (266), Expect = 9.340e-25
Identity = 55/106 (51.89%), Postives = 74/106 (69.81%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMGQD 106
            GKTRVL  R+A L+R  G P   ILAVTFT KA+ EMR RV + +G  ++  + +GTFH IC+R+LRRHGD +     G+DSRF+IFD +D R L+  I+K++G D
Sbjct:   31 GKTRVLAYRVAWLMRERGVPPARILAVTFTNKAANEMRERVDRLIGAAVARGMWIGTFHHICSRILRRHGDRI-----GVDSRFAIFDDDDQRSLVRGILKDLGLD 131

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: A0A399ZRF5_9CHLR (DNA helicase n=2 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A399ZRF5_9CHLR)

HSP 1 Score: 106 bits (265), Expect = 1.240e-24
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMG 104
            GKTRVLT+RIA+L+   G   W ILAVTFT KA++EM+ RV+K L +  +  + LGTFHSICAR+LRR  + LP     ++S F IFD++D  R++ ++I+E+ 
Sbjct:   32 GKTRVLTQRIAYLIAEEGVRPWQILAVTFTNKAAKEMQERVKKLLPDQATEGIMLGTFHSICARILRREAEHLP-----IESNFVIFDSDDQERIVKNVIRELN 130

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BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Match: UPI001AC7FDD8 (ATP-dependent DNA helicase PcrA n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=UPI001AC7FDD8)

HSP 1 Score: 106 bits (264), Expect = 1.690e-24
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    1 GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMSGQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDIIKEMG 104
            GKTRVL++RIA+L+ + G   W ILAVTFT KA++EM +RV+  L E  +  + LGTFHSICAR+LRR  D LP     L+S F IFD +D  R++  IIKE+ 
Sbjct:   31 GKTRVLSQRIAYLIDSEGVRPWQILAVTFTNKAAKEMDSRVKAMLNEQATEGMMLGTFHSICARILRRESDHLP-----LESNFVIFDADDQERIVKTIIKELN 129

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig16868.4910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FLP3_ECTSI	3.750e-59	97.17	DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D...	[more]
A0A6I7PMM4_9BACT	1.620e-26	57.55	DNA helicase n=1 Tax=Phycisphaerales bacterium Tax...	[more]
A0A399Z6V0_9CHLR	6.950e-26	51.89	DNA helicase n=1 Tax=Anaerolineae bacterium TaxID=...	[more]
A0A349BUE5_9FLAO	1.420e-25	51.89	DNA helicase (Fragment) n=1 Tax=Flavobacteriaceae ...	[more]
A0A3N5UTJ7_9CHLR	1.420e-25	51.92	DNA helicase (Fragment) n=1 Tax=Chloroflexi bacter...	[more]
A0A363U1S3_9CHLR	2.700e-25	52.88	DNA helicase n=1 Tax=Anaerolineales bacterium TaxI...	[more]
A0A850BW17_9CHLR	7.040e-25	49.04	DNA helicase (Fragment) n=1 Tax=Anaerolineales bac...	[more]
A0A1F3B8X6_9BACT	9.340e-25	51.89	DNA helicase n=1 Tax=Armatimonadetes bacterium RBG...	[more]
A0A399ZRF5_9CHLR	1.240e-24	50.00	DNA helicase n=2 Tax=Anaerolineae bacterium TaxID=...	[more]
UPI001AC7FDD8	1.690e-24	52.88	ATP-dependent DNA helicase PcrA n=1 Tax=Anaeroline...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034739	UvrD/AddA helicase, N-terminal	PFAM	PF00580	UvrD-helicase	coord: 1..101 e-value: 1.0E-21 score: 77.8
None	No IPR available	GENE3D	3.40.50.300		coord: 1..106 e-value: 7.0E-29 score: 102.7
None	No IPR available	PANTHER	PTHR11070:SF7	DNA HELICASE II	coord: 1..103
IPR000212	DNA helicase, UvrD/REP type	PANTHER	PTHR11070	UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER	coord: 1..103
IPR014016	UvrD-like helicase, ATP-binding domain	PROSITE	PS51198	UVRD_HELICASE_ATP_BIND	coord: 1..106 score: 19.904
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig16868	contig	Ecto-sp13_S_contig16868:2410..3810 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig16868.4910.1	mRNA_Ecto-sp13_S_contig16868.4910.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig16868 2410..3810 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig16868.4910.1 ID=prot_Ecto-sp13_S_contig16868.4910.1|Name=mRNA_Ecto-sp13_S_contig16868.4910.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
GKTRVLTRRIAHLVRNVGAPAWSILAVTFTKKASEEMRARVRKTLGEDMS
GQVALGTFHSICARLLRRHGDALPAVVPGLDSRFSIFDTEDSRRLLTDII
KEMGQD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR034739	UvrD/AddA_N
IPR000212	DNA_helicase_UvrD/REP
IPR014016	UvrD-like_ATP-bd
IPR027417	P-loop_NTPase