prot_Ecto-sp13_S_contig10029.49.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10029.49.1
Unique Nameprot_Ecto-sp13_S_contig10029.49.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: D8LQL4_ECTSI (Carbamoyl-phosphate synthase (Glutamine-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL4_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 6.620e-38
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
Query:   99 MAMRSDSSAKRSTRAATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            MAMRSDSSAKRSTRAATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV
Sbjct:    1 MAMRSDSSAKRSTRAATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 76          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: X1NRJ5_9ZZZZ (CPSase_sm_chain domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1NRJ5_9ZZZZ)

HSP 1 Score: 99.0 bits (245), Expect = 5.610e-24
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0
Query:  116 LTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            L LEDGT   G SFGA++SV+GEVVF+TGMVGY ESLTDPSYKGQ+LTLTYP+IGNYGV
Sbjct:    6 LVLEDGTEYRGQSFGAELSVSGEVVFNTGMVGYNESLTDPSYKGQILTLTYPLIGNYGV 64          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: A0A7S1UQY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQY8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.000e-24
Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0
Query:   98 FMAMRSDSSAKRSTRAATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            FM+ +S   AKR  + A L LEDGT L G SFG+  SV GEVVFSTGMVGY ESLTDPSY+GQ+LTLT PM+GNYGV
Sbjct:   48 FMSTKSGDDAKRPEKLARLHLEDGTTLTGRSFGSHESVEGEVVFSTGMVGYPESLTDPSYQGQILTLTSPMVGNYGV 124          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: K2C0U7_9BACT (CPSase_sm_chain domain-containing protein (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2C0U7_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 3.010e-23
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0
Query:  114 ATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            A L L+DGTV HG+SFG   S+ GEVVF+TGMVGY E+LTDPSY+GQ+LTLTYPMIGNYGV
Sbjct:    5 AQLILQDGTVYHGWSFGYHKSMDGEVVFNTGMVGYPETLTDPSYRGQILTLTYPMIGNYGV 65          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: A0A661YGR6_9BACT (Carbamoyl-phosphate synthase (Glutamine-hydrolyzing) small subunit (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661YGR6_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 5.700e-23
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0
Query:  114 ATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            A L LEDGT+ +GYSFG   SV+GEVVF+T M GY ESLTDPSYKGQ+LTLTYP++GNYGV
Sbjct:    7 AKLILEDGTIFNGYSFGYKGSVSGEVVFNTAMTGYPESLTDPSYKGQILTLTYPLVGNYGV 67          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: A0A7V4F490_9BACT (Carbamoyl-phosphate synthase small chain n=2 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V4F490_9BACT)

HSP 1 Score: 102 bits (255), Expect = 7.260e-23
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 0
Query:  112 RAATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            + A L LEDGTV+ G+SFGAD SVAGEVVF+T MVGY ESLTDPSYKGQ+L LTYPM+GNYG+
Sbjct:    6 KVAKLILEDGTVMTGFSFGADTSVAGEVVFNTSMVGYPESLTDPSYKGQILVLTYPMVGNYGI 68          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: A0A7S2G1N5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G1N5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 9.990e-23
Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 0
Query:  114 ATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            ATL LEDGT L GYSFGA   V+GEVVFSTGMVGY ESLTDPSYKGQ+L+LTYPMIGNYGV
Sbjct:   36 ATLVLEDGTRLPGYSFGARTGVSGEVVFSTGMVGYTESLTDPSYKGQLLSLTYPMIGNYGV 96          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: A0A7S1H286_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H286_HEMAN)

HSP 1 Score: 103 bits (258), Expect = 1.360e-22
Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 0
Query:   23 TVILRALLSIPRVCGALRCRAAVALQQAHTPYVATPRVRSNHHPSSQSLHDS----SRRAAFPLRCR-------GGAIKGSTAVSKFMAMRSDSSAKRSTRAATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            +++L + ++   V  AL  R+  A+ ++    +A P    N  PS   L  +    SR  A+ ++ R       GG + G++ VSK           R+ R  TL LEDG+V  G SFG+++SV+GEVVF+TGMVGY E+LTDPSY+GQ+L  TYP++GNYGV
Sbjct:   30 SIMLTSSVARKGVASALSLRSVAAMTRSFR--IAAPSAPRNSFPSPAGLRPAPPAFSRGMAYDIQKRQDAALDVGGGMGGTSGVSK-----------RTDRRCTLVLEDGSVYSGQSFGSEISVSGEVVFNTGMVGYVENLTDPSYRGQLLVSTYPLLGNYGV 179          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: A9V281_MONBE (Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V281_MONBE)

HSP 1 Score: 95.9 bits (237), Expect = 1.870e-22
Identity = 47/61 (77.05%), Postives = 50/61 (81.97%), Query Frame = 0
Query:  114 ATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            ATL LEDGT  +GYSFGA VSV GE VF TGMVGY ESLTDPSY  Q+L LT+PMIGNYGV
Sbjct:   22 ATLVLEDGTRFNGYSFGAPVSVVGETVFQTGMVGYPESLTDPSYTRQLLCLTFPMIGNYGV 82          
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Match: A0A533XPX0_9BACT (Carbamoyl phosphate synthase small subunit (Fragment) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A533XPX0_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 2.410e-22
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0
Query:  115 TLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAESLTDPSYKGQMLTLTYPMIGNYGV 174
            TL LEDG+VL GYSFG+  S +GEVVF+TGMVGY ESLTDPSYKGQ+L LTYP+IGNYGV
Sbjct:   20 TLILEDGSVLEGYSFGSPKSASGEVVFNTGMVGYLESLTDPSYKGQILVLTYPLIGNYGV 79          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10029.49.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQL4_ECTSI6.620e-38100.00Carbamoyl-phosphate synthase (Glutamine-hydrolyzin... [more]
X1NRJ5_9ZZZZ5.610e-2479.66CPSase_sm_chain domain-containing protein (Fragmen... [more]
A0A7S1UQY8_9STRA6.000e-2468.83Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
K2C0U7_9BACT3.010e-2375.41CPSase_sm_chain domain-containing protein (Fragmen... [more]
A0A661YGR6_9BACT5.700e-2373.77Carbamoyl-phosphate synthase (Glutamine-hydrolyzin... [more]
A0A7V4F490_9BACT7.260e-2376.19Carbamoyl-phosphate synthase small chain n=2 Tax=B... [more]
A0A7S2G1N5_9STRA9.990e-2383.61Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1H286_HEMAN1.360e-2240.49Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A9V281_MONBE1.870e-2277.05Predicted protein (Fragment) n=1 Tax=Monosiga brev... [more]
A0A533XPX0_9BACT2.410e-2278.33Carbamoyl phosphate synthase small subunit (Fragme... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002474Carbamoyl-phosphate synthase small subunit, N-terminal domainSMARTSM01097CPSase_sm_chain_2coord: 112..174
e-value: 3.7E-11
score: 40.1
IPR002474Carbamoyl-phosphate synthase small subunit, N-terminal domainPFAMPF00988CPSase_sm_chaincoord: 114..174
e-value: 3.8E-27
score: 94.6
IPR036480Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamilyGENE3D3.50.30.20coord: 111..174
e-value: 3.7E-30
score: 106.2
IPR036480Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamilySUPERFAMILY52021Carbamoyl phosphate synthetase, small subunit N-terminal domaincoord: 113..174
NoneNo IPR availablePANTHERPTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERcoord: 103..174
NoneNo IPR availablePANTHERPTHR11405:SF4CARBAMOYL-PHOSPHATE SYNTHASE ARGININE-SPECIFIC SMALL CHAINcoord: 103..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10029contigEcto-sp13_S_contig10029:50..1921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10029.49.1mRNA_Ecto-sp13_S_contig10029.49.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10029 48..1921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10029.49.1 ID=prot_Ecto-sp13_S_contig10029.49.1|Name=mRNA_Ecto-sp13_S_contig10029.49.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
TRPAYGVARFHGLPAPAAAAAATVILRALLSIPRVCGALRCRAAVALQQA
HTPYVATPRVRSNHHPSSQSLHDSSRRAAFPLRCRGGAIKGSTAVSKFMA
MRSDSSAKRSTRAATLTLEDGTVLHGYSFGADVSVAGEVVFSTGMVGYAE
SLTDPSYKGQMLTLTYPMIGNYGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002474CarbamoylP_synth_ssu_N
IPR036480CarbP_synth_ssu_N_sf