mRNA_Ecto-sp13_S_contig16844.4896.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: D8LIE5_ECTSI (Putative phospholipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE5_ECTSI) HSP 1 Score: 333 bits (854), Expect = 5.330e-113 Identity = 162/177 (91.53%), Postives = 168/177 (94.92%), Query Frame = 1
Query: 157 MVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGFTSSAAGKFALSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTEEDRAKADRDQWGNPGKRNRANNM 687
M+PLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEA AGGGFTS AAGKF+LSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGN PPAPVVAFLRY+VAPVIPKWQIPNALESV+NP +VWKTEEDRAKADRDQWGNPG +NM
Sbjct: 1 MIPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAIAGGGFTSPAAGKFSLSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGNPPPAPVVAFLRYVVAPVIPKWQIPNALESVKNPTQVWKTEEDRAKADRDQWGNPGALGWGHNM 177
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: D8LTQ2_ECTSI (Putative phospholipase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ2_ECTSI) HSP 1 Score: 217 bits (552), Expect = 3.620e-63 Identity = 110/235 (46.81%), Postives = 147/235 (62.55%), Query Frame = 1
Query: 1 QGDEYMVNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGFTSSAAGK--------------FALSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTEEDRAKADRDQWGNPG 663
Q +EY +N R ++H R+Y P +EIKA++LF HGYG H NS K ++G +M G+ Q+DL GHGYS GERAY Y+HWVDD QLLE AG +S G + Q ++L+ VP F++GESLGG LS+ GL+L++ H+LLPRFKG L+APAI+GN PPA +VA LR+LV P++P+WQIP+ LESV P ++R A+ D G PG
Sbjct: 77 QSEEYFINERGRVIHFRSYLPQSADEIKAVVLFSHGYGAHCNSPRKHQMGMSMPEKGLCMYQMDLEGHGYSGGERAYIEDYNHWVDDYRQLLELVAGDRIDTSRGGPSRAGDEAAGVVPHVLTATAAQRKRLQEVPFFVAGESLGGALSILLGLSLHESNHSLLPRFKGQVLLAPAIKGNPPPAMLVAALRHLVVPLVPRWQIPSCLESVNRPEMCVLEVDERRHANHDVLGYPG 311
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A836C8U6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8U6_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.710e-48 Identity = 90/204 (44.12%), Postives = 120/204 (58.82%), Query Frame = 1
Query: 61 PADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGFTSSAAG---KFALSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTEEDRAKADRDQWGNPG 663
P D IKA++ F HGYGGH + K+ G+ + G+A V DL GHGYSEG RAY + HW+DD L+ T++A G ++ Q L VP FL+GESLGG ++ GL L D + + RF G C++AP I+GN PP PVVA LRYL+AP++P +IP AL+SV P + W EDR +D WG+ G
Sbjct: 2 PEDASSIKAVVFFFHGYGGHNSYISKLWYGKYLSERGMAVVMPDLVGHGYSEGTRAYVNSWQHWIDDHRMLIGLVCDAAATAAANGTEFNLGFTEQQRSALARVPYFLTGESLGGAQAIALGLRLQDEEAGVARRFAGACVIAPGIKGNPPPKPVVAALRYLIAPLVPYREIPKALDSVFLPEKAWLRPEDREGCLQDGWGSLG 205
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A7S2UYI4_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYI4_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.210e-45 Identity = 93/242 (38.43%), Postives = 135/242 (55.79%), Query Frame = 1
Query: 19 VNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFA---GGGFTSSAAGKFA-------------LSKGQ--------LEQLKT--VPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTEED-RAKADRDQWGNPG 663
VN R++ +H+R Y P ++++ ++L+IHGYGGH+N LGE+M G+A + +DL GHGYSEGERAY ++H+VDD Q LE G + G L G+ LE+L++ +P FL+GESLGGGL++ + H L RFKG ++APA+ G PP PVV L++LV P PK +P +E V +P +WK+ E + ++D WG PG
Sbjct: 19 VNNRNQKIHVRHYLPESPKKVRGVVLWIHGYGGHINDPKGTTLGESMSKKGLAIITMDLHGHGYSEGERAYLEDWNHFVDDELQFLEMVCLPPGSRACKNKEGSSXXXXXXXXXXXASQLDSGENLGIPADFLEKLQSPEIPFFLAGESLGGGLAVLMATQMSGHAH-LASRFKGFAVIAPAVVGKPPPYPVVWLLQHLVLPFFPKTLVPQMIEPVNDPNLLWKSPEIIKRNTEQDTWGQPG 259
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A835Z2I8_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I8_9STRA) HSP 1 Score: 137 bits (345), Expect = 6.590e-35 Identity = 80/221 (36.20%), Postives = 113/221 (51.13%), Query Frame = 1
Query: 13 YMVNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGF----TSSAAGKFALSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTEEDRAKADRDQWGNPG 663
+ +TR E LH+R + P ++K ++LF+HGYG HVNS+ G+AM G+ D GHG+S+GERAY +Y WV+D LL+ G + + G A G LK VP + G+SLGGGL +G L GNTP V+ FLR + A + P Q+P++LE V+ P +W +E D+ + DQWG PG
Sbjct: 58 WFTSTRGERLHVRRFLPDSPADLKCVVLFLHGYGAHVNSTTPRAFGKAMAAAGVGVFMYDYVGHGHSQGERAYVANYLDWVEDAVLLLKMVVESGCDVPESQACLGADAAEWGPA--LKAVPFAIMGQSLGGGLIA-----------------QGSALPTSRFLGNTPHPVVLFFLRNVAARLFPLRQLPDSLERVQIPSLIWVSEADQVRTKLDQWGLPG 259
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A6H5JJB5_9PHAE (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJB5_9PHAE) HSP 1 Score: 136 bits (342), Expect = 9.440e-35 Identity = 76/223 (34.08%), Postives = 112/223 (50.22%), Query Frame = 1
Query: 1 QGDEYMVNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGFTSSAAGKFALSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYD--RQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTEEDRAKADRDQWGNPG 663
+GD + +N+R + LHLRT+ P G E+KALL + HGY H++ + E M G A + +D GHGYS+G Y H ++D +L+ G L +++ +P F G+SLGGGLSL + L + + + R GV PAI+ N P PV+ L++++AP+ P QIP +E V P VW E D+ G PG
Sbjct: 35 KGDNFFINSRKQRLHLRTFLPESGVEMKALLFWYHGYAAHISGPTFREFAEGMAADGYAVIAVDQHGHGYSDGATVLINDYKHLLEDNIAILDVVTRGT-PDGERSNLGLDPDIRDKMTQLPFFFGGQSLGGGLSLLMAMQLKNDTTRPNVGARLLGVMTNCPAIRANPPKEPVLFLLKHVIAPLFPSRQIPKFMEKVSLPELVWLKPEHIEMGALDKIGQPG 256
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A7S2MYC8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2MYC8_9DINO) HSP 1 Score: 110 bits (275), Expect = 9.690e-25 Identity = 64/184 (34.78%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 43 HLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGFTSSAAGKFALS--KGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYD-RQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALES 585
H+R + P G IKA + F HG HVN+ P + + M G A +DLPGHG+SEGE D + L F GG + AL L L+ P F+ GES+GG ++ F + L F+G L+ P++ + PP PV+ FLR V P +P W +PN+L S
Sbjct: 111 HVRHWLPPPGVTIKATMFFCHGMHVHVNAKPTIAFYDDMSARGYATFAMDLPGHGFSEGENRCMIPDFQGCFDAHEALMRFVLGGCAQDDKAEVALGVDSAVLAALRGKPFFVVGESMGGMIAAFLAQQVAKGTSRELAGGFRGALLLCPSLVVDLPPPPVLWFLRSCVVPAVPHWTMPNSLSS 294
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A7R9U9R1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9R1_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.530e-23 Identity = 67/216 (31.02%), Postives = 106/216 (49.07%), Query Frame = 1
Query: 13 YMVNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGFTSSAAGKFALSKG------QLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHA--------LLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTE 618
Y N+R + +H R Y P +G+ K+LL HG H N+ E + G+ V LD GHGYSEGER +H ++ F ++ FAG + A ++ L + QL +L +P L+G S+G G ++ GL + + + R GV +APA++ PP VV LR L+AP++P+ Q+P ++ + +W E
Sbjct: 40 YFRNSRGQRIHFRYYLP-EGQP-KSLLFVFHGLTSHCNTPIFDTFAERLGASGVVLVSLDFHGHGYSEGERCLIWDGAHLDEEAFSVVALFAGP--RALAPAEYNLEEPLSHDAEQLRRLSLLPYALAGGSMGAGAAMNVGLKIRSLSRSAASEVERDFVDRLYGVMFIAPALKAFLPPESVVWILRNLIAPLVPRAQLPAFIDKATDDALIWADE 251
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A7S3HCP1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCP1_9STRA) HSP 1 Score: 103 bits (258), Expect = 8.110e-23 Identity = 69/223 (30.94%), Postives = 104/223 (46.64%), Query Frame = 1
Query: 1 QGDEYMVNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAF-----AGGGFTSSAAGKFALSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPRFKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPKWQIPNALESVRNPIEVWKTEEDRAKADRDQWG 654
Q +N LH R A+ K +L +I GY GH+N +K+ M + +D+ GHGYSEGER T++ H ++D QL+ + A + G F S L ++ +P F+ G S+GG L T L ++ P+FKG L+APA+ T ++ LRY V P Q+P L ++ + ++T E A A D WG
Sbjct: 11 QTGNSFINENGHKLHFRVEW-ANFSTAKYVLFYIPGYSGHINGPSFLKMSAHMNKHMCVVIGVDMQGHGYSEGERCLMTNHEHMMNDFIQLVSSLQHEDKAHELTFDQSEGSF--SPQYLPDIRKLPFFIMGSSMGGALCTITAHQLQSQREEY-PQFKGAILLAPALSFKTANWLLIETLRYTVGTCTPSSQMPQFLSNLNDNTLTFRTAEGLAYAAADSWG 229
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Match: A0A7S2W3A1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W3A1_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.410e-18 Identity = 64/216 (29.63%), Postives = 102/216 (47.22%), Query Frame = 1
Query: 13 YMVNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVK---------LGEAMVPLGIANVQLDLPGHGYSEGERAYATHYSHWVDDIFQLLEAFAGGGFTSSAAGKFALSKGQLEQLKTVPIFLSGESLGGGLSLFTGLTLYDRQHALLPR-FKGVCLMAPAIQGNTPPAPVVAFLRYLVAPVIPK---WQIPNALESVRNPIEVWKTEE 621
+ T + L+ R + P DG++ K +L++ HG H K+K LG++++ G A LD+ GHG+SEG R Y YS V+D F+ + +P++L G S GG + L ++ + P ++G L+APAI G P APVV LRY++AP+IP + +PN + + R +W +E
Sbjct: 38 WFKGTDNHWLNYRKFMPPDGQKPKGVLIYQHGIMDHCGVGYKLKDGTTTNYALLGKSLIEEGFAFYVLDMRGHGFSEGLRHYVPDYSVNVNDFDNFSRFVDSSEFSG----------------QDIPLYLGGHSYGGTICLHVS-RMWQNDTSKKPNGYRGSLLVAPAIIGTLPAAPVVFVLRYILAPLIPTRTPFFMPNPVSADR----IWNNQE 232 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16844.4896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16844.4896.1 >prot_Ecto-sp13_S_contig16844.4896.1 ID=prot_Ecto-sp13_S_contig16844.4896.1|Name=mRNA_Ecto-sp13_S_contig16844.4896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp MVNTRDEMLHLRTYAPADGEEIKALLLFIHGYGGHVNSSPKVKLGEAMVPback to top mRNA from alignment at Ecto-sp13_S_contig16844:294..3814- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16844.4896.1 ID=mRNA_Ecto-sp13_S_contig16844.4896.1|Name=mRNA_Ecto-sp13_S_contig16844.4896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3521bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16844:294..3814- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16844:294..3814- >mRNA_Ecto-sp13_S_contig16844.4896.1 ID=mRNA_Ecto-sp13_S_contig16844.4896.1|Name=mRNA_Ecto-sp13_S_contig16844.4896.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16844:294..3814- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |