prot_Ecto-sp13_S_contig16833.4889.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16833.4889.1
Unique Nameprot_Ecto-sp13_S_contig16833.4889.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length260
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16833.4889.1 vs. uniprot
Match: D7FM02_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM02_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 5.290e-153
Identity = 225/239 (94.14%), Postives = 230/239 (96.23%), Query Frame = 0 
Query:   21 MSYPTNDNSRWEPPPRRLSEGTIVLAPRRRSIIRDEEGEGEDVEEKADPPLGRWHQHSLCPCRNPNIMLYSLCXXXXAMGDIGCILRENWMCYPAYCLGAWCPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFVRVIGARLMCFCSVCLMPCLHISQMRAEVAFRKHGKATVCPXXXXXXXXXXXPGQATYKEEELDYPRDDGVERPHAIEXXXXXXXGGKRVELTPEREVKVVLDYPR 259
            MSYPTNDNS WEPP RR SEGTIVLAPRRRSIIRDEEGEGE VEEK DPPLGRWHQHSLCPCRNPNIMLYSLCXXXXAMGDIGC LRENWMCYPAYCLGA CPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFV++IGARLMCFCSVCLMPCLHISQMRAEVAFRKHGKATVCPXXXXXXXXXXX G+ TYKEEELDYPRDDGV+RPHAIEXXXXXXXGGKRVELTPE+EVKVVLDYPR
Sbjct:    1 MSYPTNDNSGWEPPSRRPSEGTIVLAPRRRSIIRDEEGEGEGVEEKPDPPLGRWHQHSLCPCRNPNIMLYSLCXXXXAMGDIGCYLRENWMCYPAYCLGASCPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFVKMIGARLMCFCSVCLMPCLHISQMRAEVAFRKHGKATVCPXXXXXXXXXXXXGETTYKEEELDYPRDDGVKRPHAIEXXXXXXXGGKRVELTPEKEVKVVLDYPR 239
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16833.4889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM02_ECTSI5.290e-15394.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16833contigEcto-sp13_S_contig16833:387..2612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16833.4889.1mRNA_Ecto-sp13_S_contig16833.4889.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16833 48..2694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16833.4889.1 ID=prot_Ecto-sp13_S_contig16833.4889.1|Name=mRNA_Ecto-sp13_S_contig16833.4889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
MVPPLRHRETNSGAPAGKAVMSYPTNDNSRWEPPPRRLSEGTIVLAPRRR
SIIRDEEGEGEDVEEKADPPLGRWHQHSLCPCRNPNIMLYSLCCCCCAMG
DIGCILRENWMCYPAYCLGAWCPCCVGDTRELVAEKYNLPIVSWDPDEFG
WCFVRVIGARLMCFCSVCLMPCLHISQMRAEVAFRKHGKATVCPCCCCEC
GGGEGPGQATYKEEELDYPRDDGVERPHAIEEADYPREGGKRVELTPERE
VKVVLDYPR*
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