prot_Ecto-sp13_S_contig16823.4886.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16823.4886.1
Unique Nameprot_Ecto-sp13_S_contig16823.4886.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: D7FP97_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP97_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 3.150e-46
Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPAGFPFQILAIFMTLLEGNAFATFVSGAAPDPLT 85
            MEERSIYTREHSRGAYRV+SYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPAGFPFQILAIFMTLLEGNAFATFVSG+APDPLT
Sbjct:  467 MEERSIYTREHSRGAYRVMSYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPAGFPFQILAIFMTLLEGNAFATFVSGSAPDPLT 551          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A6S9KQH8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KQH8_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 6.900e-17
Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPAG--FPFQILAIFMTLLEGNAFATFVSGAAPDPLT 85
            + ER I+TRE+SRGAYR ISY+L   L+++PV  ++ + FT++S+FM+ LP     F FQ+L + +T   GN F T +SG  PD LT
Sbjct:  430 LNERDIFTRENSRGAYRSISYVLAGTLVFIPVTFILGLVFTSVSWFMVGLPNDANLFFFQVLTLLVTCFLGNCFCTLISGIVPDALT 516          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A2R6XAD8_MARPO (ABC transporter domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XAD8_MARPO)

HSP 1 Score: 68.6 bits (166), Expect = 1.320e-11
Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDL--PPAGFPFQILAIFMTLLEGNAFATFVSGAAPD 82
            +EER I+ RE SRGAYR  +Y++   ++ +P  +++++ F+ ISY+++ L   P  F F  L +F+ LL  N+F +FVSG  P+
Sbjct:  494 LEERQIFIRETSRGAYRAATYVISGAIVIIPFLMILAIVFSTISYWLVGLVAEPGPFFFFTLTVFLVLLVANSFVSFVSGLVPN 577          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A2K1L8H1_PHYPA (ABC transporter domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L8H1_PHYPA)

HSP 1 Score: 63.5 bits (153), Expect = 7.580e-10
Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPP-AGFPFQ-ILAIFMTLLEGNAFATFVSGAAPD 82
            + ER I+ RE SRGAYRV +Y+L   L+ LP   V+++ F+ +SYFM+ L   AG  F  +  +F+TL   NAF  F++   PD
Sbjct:  429 LNERQIFIRETSRGAYRVSAYVLSQALVILPFLFVLAMIFSCVSYFMVGLAKDAGAFFSFVFILFLTLAVANAFVAFMASFVPD 512          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A1Y1IEV1_KLENI (ABC transporter G family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEV1_KLENI)

HSP 1 Score: 63.2 bits (152), Expect = 1.040e-9
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPAGFPFQ--ILAIFMTLLEGNAFATFVSGAAPD 82
            +EER I+ RE SRGAYR  ++++   L+Y P  L+++VAF AISYFM+ +     PF   +L++++ L+  N F  F     P+
Sbjct:  439 LEERLIFVRETSRGAYRTSAFVVAQQLVYAPFFLLLAVAFCAISYFMVGMAAGTEPFLFFVLSVWLVLIVANTFVLFWGAVVPN 522          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A8J5SHR1_ZIZPA (AAA domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SHR1_ZIZPA)

HSP 1 Score: 60.8 bits (146), Expect = 6.770e-9
Identity = 35/82 (42.68%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    3 ERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPA--GFPFQILAIFMTLLEGNAFATFVSGAAPD 82
            ER IY RE +  AYR  SY L N ++  P  +V+S+AFT IS+F + L     GF F +L +  +   G  F TF+SG  PD
Sbjct:  535 ERYIYLRETAHNAYRRSSYTLSNAIVAFPPLVVLSLAFTVISFFAVGLAGGVGGFLFFVLIVLASFWAGGGFVTFLSGVIPD 616          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A5C7ICG9_9ROSI (ABC transporter domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7ICG9_9ROSI)

HSP 1 Score: 60.5 bits (145), Expect = 9.200e-9
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPA--GFPFQILAIFMTLLEGNAFATFVSGAAPD 82
            ++ER I TRE SRGAYRV SY+L N LI++P  L++ + FT   Y++I L     GF +  L ++M LL  N+F    S   P+
Sbjct:  403 LQERGILTRETSRGAYRVSSYVLSNTLIFIPFLLMVGLLFTTPVYWLIGLRRDIDGFMYFSLVVWMVLLMSNSFVACFSALVPN 486          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A2K1JQD6_PHYPA (ABC transporter domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JQD6_PHYPA)

HSP 1 Score: 60.5 bits (145), Expect = 9.260e-9
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPAG--FPFQILAIFMTLLEGNAFATFVSGAAPD 82
            +EER+I TRE SRGAYRV SY+L + LI+LP    +++ +    Y ++ L P    F F +L I++ L+  N+F +F+S    D
Sbjct:  483 LEERTILTRETSRGAYRVSSYVLSSTLIFLPFLFFVALLYAGPVYHLVGLAPQSDAFIFFLLVIWLVLVTANSFVSFLSAMVSD 566          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A0K9P591_ZOSMR (ABC transporter G family member n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P591_ZOSMR)

HSP 1 Score: 60.1 bits (144), Expect = 1.260e-8
Identity = 31/84 (36.90%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDL--PPAGFPFQILAIFMTLLEGNAFATFVSGAAPD 82
            ++ER+I TRE +RGAYR+ SY+  N +I+LP  L +++ ++  +Y+M+ L   P  F +  L I++ +L  N+F +F S   P+
Sbjct:  414 LQERTILTRETTRGAYRISSYVTANTVIFLPFLLSVAILYSLPAYWMVGLRRDPTAFLYFTLVIWLVVLMANSFVSFFSALVPN 497          
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Match: A0A2K1KX83_PHYPA (ABC transporter domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KX83_PHYPA)

HSP 1 Score: 60.1 bits (144), Expect = 1.260e-8
Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    1 MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDLPPA--GFPFQILAIFMTLLEGNAFATFVS 77
            +EER+I TRE SRGAYRV SY+L + L++LP  L +++ +    Y+++ L P    F F +L I++ L+  N+F +F S
Sbjct:  474 LEERNILTRETSRGAYRVSSYVLSSTLVFLPFLLFIALLYAGPVYYLVGLAPQVDAFLFFLLVIWLILVTANSFVSFFS 552          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16823.4886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP97_ECTSI3.150e-4697.65ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6S9KQH8_HETAK6.900e-1747.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R6XAD8_MARPO1.320e-1139.29ABC transporter domain-containing protein n=2 Tax=... [more]
A0A2K1L8H1_PHYPA7.580e-1042.86ABC transporter domain-containing protein n=2 Tax=... [more]
A0A1Y1IEV1_KLENI1.040e-939.29ABC transporter G family n=1 Tax=Klebsormidium nit... [more]
A0A8J5SHR1_ZIZPA6.770e-942.68AAA domain-containing protein n=1 Tax=Zizania palu... [more]
A0A5C7ICG9_9ROSI9.200e-942.86ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2K1JQD6_PHYPA9.260e-940.48ABC transporter domain-containing protein n=3 Tax=... [more]
A0A0K9P591_ZOSMR1.260e-836.90ABC transporter G family member n=1 Tax=Zostera ma... [more]
A0A2K1KX83_PHYPA1.260e-841.77ABC transporter domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 2..82
e-value: 1.3E-12
score: 47.5
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 2..77
NoneNo IPR availablePANTHERPTHR19241:SF482ABC TRANSPORTER G FAMILY MEMBER 10coord: 2..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 58..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16823contigEcto-sp13_S_contig16823:2672..3814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16823.4886.1mRNA_Ecto-sp13_S_contig16823.4886.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16823 2664..3814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16823.4886.1 ID=prot_Ecto-sp13_S_contig16823.4886.1|Name=mRNA_Ecto-sp13_S_contig16823.4886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MEERSIYTREHSRGAYRVISYLLCNFLIYLPVCLVMSVAFTAISYFMIDL
PPAGFPFQILAIFMTLLEGNAFATFVSGAAPDPLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans