prot_Ecto-sp13_S_contig1681.4879.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1681.4879.1
Unique Nameprot_Ecto-sp13_S_contig1681.4879.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length216
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1681.4879.1 vs. uniprot
Match: D7FKI9_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI9_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 6.220e-37
Identity = 131/214 (61.21%), Postives = 135/214 (63.08%), Query Frame = 0 
Query:    1 MAVPGTQGKSLHLACMDGDAAVVQRWLDAGKFVDKRDSSERTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------AAGAELEIRDVENKIAGDVFNKKASNRFRVPLETRDEIIAMRNSRQQEIAVAKQRGEAVRLGERAKTGKTRPR 199
            MAVPGTQGKSLHLACMDGDAA VQRWLDAG FVDKRDSS RTG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                           AAGAE+EIRDV N IAGDVFNKK      VPLETRD++IAMRNSRQQEIAVAKQR EAVRL ERAKTG+ R R
Sbjct:    4 MAVPGTQGKSLHLACMDGDAAAVQRWLDAGNFVDKRDSSGRTGLHQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGHLAVVKNQLKKSSVPLANDEQVLLGFKANINAVDFNGDTPLSKAARAGMVDVIDALLAAGAEIEIRDVGNNIAGDVFNKK------VPLETRDKVIAMRNSRQQEIAVAKQREEAVRLAERAKTGQPRNR 211
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1681.4879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKI9_ECTSI6.220e-3761.21Chain A, 4ank: A Designed Ankyrin Repeat Protein W... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 6..35
e-value: 1100.0
score: 4.8
coord: 72..101
e-value: 3.9E-6
score: 36.4
coord: 105..134
e-value: 0.003
score: 26.8
coord: 39..68
e-value: 2.9
score: 16.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 105..137
score: 13.25
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 72..104
score: 12.102
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 39..71
score: 10.072
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 59..136
e-value: 1.0E-12
score: 48.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 6..137
score: 38.541
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..181
e-value: 1.3E-42
score: 147.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 10..148
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 64..154
coord: 8..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1681contigEcto-sp13_S_contig1681:4682..7818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1681.4879.1mRNA_Ecto-sp13_S_contig1681.4879.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1681 4541..7827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1681.4879.1 ID=prot_Ecto-sp13_S_contig1681.4879.1|Name=mRNA_Ecto-sp13_S_contig1681.4879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
MAVPGTQGKSLHLACMDGDAAVVQRWLDAGKFVDKRDSSERTGLHQAAKC
GQSEVASLLLGAHAEVDSLDKQQRTPLHLCSETGHLAVVKVLLDFKANIN
AVDFNGDTPLNKAARAGMVDVVEALLAAGAELEIRDVENKIAGDVFNKKA
SNRFRVPLETRDEIIAMRNSRQQEIAVAKQRGEAVRLGERAKTGKTRPRE
KGSRDDGGCACCCIS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf