prot_Ecto-sp13_S_contig16808.4877.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16808.4877.1
Unique Nameprot_Ecto-sp13_S_contig16808.4877.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16808.4877.1 vs. uniprot
Match: D7FQH1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH1_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 1.790e-46
Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 0 
Query:    1 MELLVKIAAAHPSDTFRRKQAKAAIQDYAEEERSTAEGGYWMDRGVRDVLDLNARNRLTETPLILGAQNASIEVVAALLEEPNTD 85
            MELLVKI AAHPSDTFRRKQAKAAIQDYAEEERSTAEGGYWMDRG++D LDLNARNRLTETPLILGAQNASIEVVAALLEEP+TD
Sbjct:  146 MELLVKIGAAHPSDTFRRKQAKAAIQDYAEEERSTAEGGYWMDRGIKDALDLNARNRLTETPLILGAQNASIEVVAALLEEPDTD 230
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16808.4877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQH1_ECTSI1.790e-4694.12Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16808contigEcto-sp13_S_contig16808:1729..3125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16808.4877.1mRNA_Ecto-sp13_S_contig16808.4877.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16808 1729..3741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16808.4877.1 ID=prot_Ecto-sp13_S_contig16808.4877.1|Name=mRNA_Ecto-sp13_S_contig16808.4877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MELLVKIAAAHPSDTFRRKQAKAAIQDYAEEERSTAEGGYWMDRGVRDVL
DLNARNRLTETPLILGAQNASIEVVAALLEEPNTD
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