mRNA_Ecto-sp13_S_contig16803.4876.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: D7FUV6_ECTSI (Predicted ATPase of the ABC class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV6_ECTSI) HSP 1 Score: 384 bits (985), Expect = 1.490e-133 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGGARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQNG 594
EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGGARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQNG
Sbjct: 68 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGGARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQNG 265
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A6H5JP10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP10_9PHAE) HSP 1 Score: 333 bits (855), Expect = 7.040e-108 Identity = 176/183 (96.17%), Postives = 176/183 (96.17%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGG--VKRHKTFHLAGGARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFE 543
EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVG VKRHKTFH AGGARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFE
Sbjct: 533 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGXXXXXXVKRHKTFHFAGGARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFE 715
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A2D4BNI8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNI8_PYTIN) HSP 1 Score: 186 bits (471), Expect = 4.650e-52 Identity = 111/199 (55.78%), Postives = 136/199 (68.34%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGG--ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMD-AKGLDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQ 588
EKEPITPFIS+VRALY++M VSS+LVIGG GDYF VAD VIMMD Y P+DVT EAK IA + G + + TF GG +R+P R + GKVV+R ++IQYGDVD+DL VEQLVETSQ RA+ADA+ + RS M + +K++L +E EMD LD L + YARPRRFE+AAAINR R V Q
Sbjct: 438 EKEPITPFISKVRALYDSMGVSSVLVIGGAGDYFSVADHVIMMDSYSPRDVTTEAKAIAKEH-----GEILQEPTF---GGFRSRIPLPRGFEVTGKVVSRGLNRIQYGDVDLDLSAVEQLVETSQVRAIADAIATV-RSLMNGQRTLKEILXMIEKEMDETNSLDCLSSFRKVGFYARPRRFELAAAINRLRGATVTQ 627
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A3R7IFS1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IFS1_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.660e-50 Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGG--ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKG-LDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQ 588
+KEPITPFIS+VRALYE VSS+LVIGG GDYF VAD VIMMD Y P+DVTAEAK+IA++ G +++ TF GG R+P +R + GK+V+R DKIQYG+VD+DL VEQ+VE SQ R +ADA+ ARS M K +++++ LE+EMD G LD + Y RPR+ E+AAAINR R + Q
Sbjct: 435 DKEPITPFISKVRALYEQCGVSSVLVIGGAGDYFSVADHVIMMDSYEPRDVTAEAKKIASEH-----GEIRQDATF---GGFKVRIPLSRGFEVNGKIVSRGVDKIQYGEVDLDLSAVEQIVEPSQVRTIADAIQK-ARSYMDGKRTLEEVISMLESEMDRTGSLDVVGVHKKSGFYTRPRKLELAAAINRLRSATMTQ 624
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A8K1F9B2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1F9B2_PYTOL) HSP 1 Score: 179 bits (455), Expect = 9.780e-50 Identity = 108/199 (54.27%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGG--ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMD-AKGLDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQ 588
+KEPITPFIS+VRALYE VSS+LVIGG GDYF VAD VIMMD Y P+DVT EAK IA+ G +++ F GG AR+P R + GKVV+R D+IQYGDVD+DLG VEQ+VE SQ RA+ADA+ AR M + +KD+L +E MD + LD + + YARPRRFE+AAAINR R + Q
Sbjct: 441 DKEPITPFISKVRALYENHGVSSVLVIGGAGDYFSVADHVIMMDSYEPRDVTVEAKAIASKH-----GEIRQEDEF---GGFRARIPLRRGFEVSGKVVSRGLDRIQYGDVDLDLGAVEQIVEPSQVRAIADAIQS-AREFMDGRRTLKDVLLAMEEAMDRSSSLDTIGMHSKSGFYARPRRFELAAAINRLRSATMTQ 630
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A835YTL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL6_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.420e-48 Identity = 109/234 (46.58%), Postives = 139/234 (59.40%), Query Frame = 1
Query: 1 EKEPITPFISR----------------------VRALYETMSVSSILVIGGCGDYFE--------------------VADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGGARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSA--MARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFEVAAAINRYR 570
+KEPITPFIS+ VRALY VSS+LVIGG GDYFE VADTV+MMDCY P+DVTA+A+ I + G V + F R P A ++ + GKVVAR KDKIQYGDVDI+L VEQL E SQTRA+ A+ +LA S MA++ ++ +LD+ ++++D+ GLDAL AF+ +ARPRRFE+AAAINRYR
Sbjct: 472 DKEPITPFISKASARAHGRARCGLLRPGQRARPVRALYADKGVSSVLVIGGAGDYFEGKLFLVSHAFPKSVGVTFYQVADTVVMMDCYAPRDVTAQARAIVTESLSLGHKSVIQLPEFGQVS-QRTPSAASFTTHGKVVARGKDKIQYGDVDIELAPVEQLCEASQTRAIGAAMRLLASSVGPMAQRATMQHVLDWFDSQVDSNGLDALALNAFIGDFARPRRFELAAAINRYR 704
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: K3WBG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBG0_GLOUD) HSP 1 Score: 173 bits (438), Expect = 2.950e-47 Identity = 107/199 (53.77%), Postives = 129/199 (64.82%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGG--ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMD-AKGLDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQ 588
EKEPITPFIS+VRALY VSS+LVIGG GDYF VAD VIMMD Y P+DVT EAK+IA G +++ F GG AR+P R + GKVVAR +IQYG+VD+DL VEQLVE SQ RA+ADA+ + ARS M K + ++L+ LE EM LD + Y RPRRFE+AAAINR R + Q
Sbjct: 449 EKEPITPFISKVRALYNQNGVSSVLVIGGAGDYFSVADHVIMMDSYEPRDVTKEAKQIAKQH-----GEIRQDDDF---GGFTARIPLPRGFEVNGKVVARGLGRIQYGEVDLDLAAVEQLVEPSQVRAIADAI-LKARSYMDGKRTLTEVLNVLEEEMARTNSLDLIGTHKKSGFYTRPRRFELAAAINRLRTATITQ 638
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A7S4TB03_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TB03_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.730e-47 Identity = 92/203 (45.32%), Postives = 131/203 (64.53%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIA--ADETVGGGGGVKRH-KTFHLAGG---ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFEVAAAINRYR-EGKVEQ 588
+KEPITPF+ +VR+LY VSSILVIGG GDYF+VAD V+MMDCY DVT AK IA A++ + G H + L G R P +++ ++GKV R+ + I YGDV++DL G+EQ+V TSQT +++ AL + S+ + + + +++ ++A +D GLDAL PG F ARPR FE+A A+NR R +G + Q
Sbjct: 49 DKEPITPFVRKVRSLYTEKGVSSILVIGGSGDYFDVADHVVMMDCYTCHDVTERAKTIATNANKAIEASNGNLHHTSSAPLPFGDITPRCPVGQSFKAKGKVAVRATNVISYGDVELDLSGLEQIVSTSQTNSISSALQKIGSSSTSGRSTLLEVIASIDATLDRDGLDALAPGQFHGGLARPRSFEIAGAVNRLRVDGNMVQ 251
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A5D6Y400_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y400_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.190e-46 Identity = 102/199 (51.26%), Postives = 128/199 (64.32%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIAADETVGGGGGVKRHKTFHLAGG--ARVPQARTYASRGKVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARSAMARKLPVKDLLDFLEAEMD-AKGLDALMPGAFMAKYARPRRFEVAAAINRYREGKVEQ 588
+KEPITPFI++VRAL+E VSS+LV+GG GDYF VAD VIMMD Y P+DVT EAK IAA +++ F GG AR+P R + GKVV+R +IQYG+VD+DL VEQ+VE SQ RA+AD + + RS M K + ++LD LE E D LD + P Y RPRRFE+AAAINR R + Q
Sbjct: 428 DKEPITPFIAKVRALFEREGVSSVLVVGGAGDYFSVADHVIMMDAYAPRDVTREAKAIAAAHPA-----IRQDSVF---GGFTARIPLPRGFEVTGKVVSRGIGRIQYGEVDLDLSAVEQIVEPSQVRAIADGIVKM-RSYMDGKRTLAEVLDILEQEFDRTASLDVIGPHRKSGFYTRPRRFELAAAINRLRTATMTQ 617
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Match: A0A2R5G7R3_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7R3_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.050e-46 Identity = 100/201 (49.75%), Postives = 128/201 (63.68%), Query Frame = 1
Query: 1 EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDVTAEAKRIA---ADETVGGGGGVKRHKTFHLAGGARVPQARTYASRG----KVVARSKDKIQYGDVDIDLGGVEQLVETSQTRAVADALDMLARS-AMARKLPVKDLLDFLEAEMDAKGLDALMPGAFMAKYARPRRFEVAAAINRYREGK 579
+KEPI PFIS+VRALY+T VS+ILVIGG GDYFEVADTV+MMD Y P DVT +AK IA A+ G R+ AR P + RG KVVAR D I YGD+++DLGG+EQLVE SQ RA+AD + L + A+ K ++++L ++AE++ KGLDA + RPRRFE+A AINR R +
Sbjct: 455 DKEPIKPFISKVRALYDTHGVSTILVIGGAGDYFEVADTVVMMDSYKPFDVTTKAKAIARRHAEARGDASGDSSRYSASFAGWSARAPLPDGFVPRGEMSSKVVARRLDTISYGDLNLDLGGLEQLVEVSQVRAIADIMQWLVQHRAINGKRTLREILQLVDAELEEKGLDAFALFSKTGNLVRPRRFEIAGAINRLRTAR 655 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16803.4876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16803.4876.1 >prot_Ecto-sp13_S_contig16803.4876.1 ID=prot_Ecto-sp13_S_contig16803.4876.1|Name=mRNA_Ecto-sp13_S_contig16803.4876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp EKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPKDback to top mRNA from alignment at Ecto-sp13_S_contig16803:75..3259- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16803.4876.1 ID=mRNA_Ecto-sp13_S_contig16803.4876.1|Name=mRNA_Ecto-sp13_S_contig16803.4876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3185bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16803:75..3259- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16803:75..3259- >mRNA_Ecto-sp13_S_contig16803.4876.1 ID=mRNA_Ecto-sp13_S_contig16803.4876.1|Name=mRNA_Ecto-sp13_S_contig16803.4876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16803:75..3259- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |