mRNA_Ecto-sp13_S_contig16800.4874.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A6H5K7S9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S9_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 8.500e-21 Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTCCEC 132
GLAHIHD GM+HRDIKAANIVVMVNEDGSASGKVADFGLTC EC
Sbjct: 53 GLAHIHDDGMIHRDIKAANIVVMVNEDGSASGKVADFGLTCGEC 96
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: D8LJ48_ECTSI (Similar to doublecortin and CaM kinase-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ48_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 1.220e-17 Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTC 123
GLAHIHDH MVHRDIKAANIVVMVNEDGSASGKVADFGLTC
Sbjct: 553 GLAHIHDHNMVHRDIKAANIVVMVNEDGSASGKVADFGLTC 593
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A6H5JBQ5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ5_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.600e-17 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTC 123
GLAHIHD GM+HRDIKAANI VMVNEDGSASGKVADFGLTC
Sbjct: 53 GLAHIHDDGMIHRDIKAANIGVMVNEDGSASGKVADFGLTC 93
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: D7G381_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G381_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 1.800e-15 Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTC 123
GL HIHD GMVHRDIKAANI+VMVNEDG A+GKVADFGLTC
Sbjct: 509 GLQHIHDKGMVHRDIKAANIIVMVNEDGDATGKVADFGLTC 549
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A6H5JND7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND7_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.800e-15 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTCCE 129
GL HIHD GMVHRDIKAANI+VMVNEDG A+GKVADFGLTC +
Sbjct: 546 GLQHIHDKGMVHRDIKAANILVMVNEDGDATGKVADFGLTCAQ 588
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A388LLE5_CHABU (Protein kinase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLE5_CHABU) HSP 1 Score: 61.6 bits (148), Expect = 8.910e-10 Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTCCEC 132
GL H H G+VHRD+K N++VMV+EDG + K++DFG +CC C
Sbjct: 163 GLQHAHSRGVVHRDVKGQNVLVMVDEDGGVTAKLSDFGASCCVC 206
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A388LLR0_CHABU (Protein kinase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLR0_CHABU) HSP 1 Score: 60.1 bits (144), Expect = 1.200e-9 Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTCCEC 132
GL H H G+VHRD+K N++VMV+E+G + K++DFG +CC C
Sbjct: 79 GLQHAHSRGVVHRDVKGQNVLVMVDEEGGVTAKLSDFGASCCVC 122
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A388LLP1_CHABU (Protein kinase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLP1_CHABU) HSP 1 Score: 60.1 bits (144), Expect = 3.110e-9 Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTCCECFCP 141
GL H H G+VHRD+K N++VMV+E+G + K++DFG +CC C P
Sbjct: 128 GLQHAHSRGVVHRDVKGQNVLVMVDEEGGVTAKLSDFGSSCCVCGDP 174
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A388LLI6_CHABU (Protein kinase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLI6_CHABU) HSP 1 Score: 59.3 bits (142), Expect = 5.820e-9 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 GLAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGLTCCECFCP 141
GL H H G+VHRD+K N+++MV+E+G + K++DFG +CC C P
Sbjct: 289 GLQHAHSRGVVHRDVKGQNVLLMVDEEGGVTAKLSDFGASCCVCGDP 335
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Match: A0A4R7FSV7_9MICO (Non-specific serine/threonine protein kinase n=1 Tax=Amnibacterium kyonggiense TaxID=595671 RepID=A0A4R7FSV7_9MICO) HSP 1 Score: 54.7 bits (130), Expect = 2.480e-7 Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 4 LAHIHDHGMVHRDIKAANIVVMVNEDGSASGKVADFGL 117
LAHIHD G+VHRD+K AN+++ V DG+ GK+ DFG+
Sbjct: 121 LAHIHDRGVVHRDVKPANVLLQVRPDGAVRGKLTDFGI 158 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16800.4874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16800.4874.1 >prot_Ecto-sp13_S_contig16800.4874.1 ID=prot_Ecto-sp13_S_contig16800.4874.1|Name=mRNA_Ecto-sp13_S_contig16800.4874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp MVHRDIKAANIVVMVNEDGSASGKVADFGLTCCECFCPLVQ*back to top mRNA from alignment at Ecto-sp13_S_contig16800:2..154- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16800.4874.1 ID=mRNA_Ecto-sp13_S_contig16800.4874.1|Name=mRNA_Ecto-sp13_S_contig16800.4874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=153bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16800:2..154- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16800:2..154- >mRNA_Ecto-sp13_S_contig16800.4874.1 ID=mRNA_Ecto-sp13_S_contig16800.4874.1|Name=mRNA_Ecto-sp13_S_contig16800.4874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=126bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16800:2..154- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |