prot_Ecto-sp13_S_contig168.4869.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig168.4869.1
Unique Nameprot_Ecto-sp13_S_contig168.4869.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length194
Homology
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 7.260e-93
Identity = 140/176 (79.55%), Postives = 150/176 (85.23%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKGRPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYALP 193
            +VP +IY+K V YKKAK NVRRRFHGTS S QCNF VDLKG PCSSK CNVCNICT+GF LR NV GTA+   YR RYGEGLYFSSVSGKSNDYAQQSEKVGS+ KKVRCMFVANV AGNAYLT+Q SLG+D CPPAGYDSVVGEV  G GL HDELV Y++EAAIPS LIVYALP
Sbjct:   60 KVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSLGQDMCPPAGYDSVVGEV--GSGLIHDELVAYEDEAAIPSYLIVYALP 233          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 4.740e-76
Identity = 118/163 (72.39%), Postives = 129/163 (79.14%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKGRPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEV--------RAGGGLNHD 172
            +VP +IY KY  YKKAK N+RRRFHGTS S  CNF VDLKG PCSS+ CNVCNICTNGF L+GNVGGTAK T   LRYGEGLYFSSVSGKSNDYAQ SEKVGS+ KKVRCMF+ANV AGNAYLT+Q SLG++ CPPAG+DSVVGE         RA  G  HD
Sbjct:  122 KVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSLGQNMCPPAGHDSVVGEAPIETYRTDRAATGATHD 284          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 4.210e-72
Identity = 114/174 (65.52%), Postives = 139/174 (79.89%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKGRPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYA 191
            +VP ++ RK   Y+K   NVRRRFHGTS S +CNF VDL+G PCS K C VC+ICT+GF L+GNVGGTA+ T + LRYGEGLYFSSVSGK+NDYA  SEK  S  +++RCMFVANV AG A+ T + SL +++CPPAGYDSVVGEV  G GLN+DELVVYK+EAA+P+ LIVY+
Sbjct:  282 EVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEV--GQGLNYDELVVYKDEAALPTHLIVYS 453          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 6.500e-60
Identity = 100/175 (57.14%), Postives = 125/175 (71.43%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKGRPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYAL 192
            +VP  +  K+  Y +  RN+RRRFHGTS S  CNF+VD +  PC  + C++CNI   GF+L  NVG TA    + LRYG+G+YFSSVSGK+NDYA  + K   +  K+RCMFVANV AG AY T++ +L   KCPP GY+SVVGEV  G GLN+DELVVYK EAA+P+ LIVYAL
Sbjct:  276 EVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEV--GQGLNYDELVVYKEEAALPTHLIVYAL 448          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.210e-59
Identity = 101/175 (57.71%), Postives = 125/175 (71.43%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKGRPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYAL 192
            QVP +I R+         NV+RRFHGTS S  C F VDL+G PC    C VCNICT+GF+LR NVG TA+ T + LRYG+GLYFSSVSGK+NDYA+ SEK     KKVRCMF+++V  G A++T +  L  ++CPP G+DSVVGE   G  LN+ E+VVYK EAA+P+ LIVYAL
Sbjct:  302 QVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGE--KGPALNYPEVVVYKEEAALPTHLIVYAL 474          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D7FXR1_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR1_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.190e-54
Identity = 94/177 (53.11%), Postives = 119/177 (67.23%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKG--RPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYAL 192
            +V   +  ++  YK    N+ +RFHGTS +  CNF+VD +G   PC    C+VCNIC  GF+L  NV GTA+ TG+ LRYGEG+Y +SVSGK+NDYA +S K      ++RCMFVANV  G  + T+  SL  ++CPP GY SVVGEV  G GLN DE VVY  EAA+P+ LIVYAL
Sbjct:   55 EVSREVREEHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGFPLRYGEGVYLTSVSGKANDYASRSAKKIGNDSELRCMFVANVAVGRTFKTKSTSLPANQCPPPGYQSVVGEV--GRGLNFDEFVVYDEEAALPTHLIVYAL 229          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 2.460e-54
Identity = 96/182 (52.75%), Postives = 119/182 (65.38%), Query Frame = 0
Query:   13 RATFFQVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKG--RPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYAL 192
            R    QV   +  K+  YK    N+ +RFHGTS +  CNF+VD +G   PC    C+VCNIC  GF+L  NV GTA+ TG  LRYGEG+Y +SVSGK+NDYA +S K      ++RCMFVA+V  G A+ T+   L  ++CPP GY SVVGEV  G GLN DE VVY  EAA+P+ LIVYAL
Sbjct:   51 RVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEV--GQGLNFDEFVVYNEEAALPTHLIVYAL 230          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.050e-51
Identity = 97/177 (54.80%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKK-AKRNVRRRFHGTSSSPQCNFVVDLKGR--PCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYA 191
            QVP  ++ K+  YK+    N+R+RFHGTS +  CNF+VD +G   PC    C+VCNIC  GF+L  NV  TA+ +G  LRYG G+YFSSVSGK+NDYA+ S K GS+  ++RCMFVANV  G A+ T+++ L + +CPP+G  SVVGEV  G  LN+DE+VVYK EAA+P+ LIVYA
Sbjct:  501 QVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEV--GHALNYDEVVVYKEEAALPTHLIVYA 675          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 2.010e-49
Identity = 95/177 (53.67%), Postives = 117/177 (66.10%), Query Frame = 0
Query:   18 QVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQCNFVVDLKG--RPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYAL 192
            QV   +  K+  YK    N+ +RFHGTS +  CNF+VD +G   PC    C+VCNIC  GF+L  NV  TA+ T + LRYG G+Y +SVSGK+NDYA +S K   E + +RCMFVA+V  GN + T  A L  D+CPP GY SVVGE  AG  LN DE VVYK EAA+P+ LIVYAL
Sbjct:  253 QVSREVREKHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYASRSAKKVGELE-LRCMFVASVALGNTFKTTSARLPADQCPPPGYHSVVGE--AGQRLNFDEFVVYKEEAALPTHLIVYAL 426          
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Match: D8LKU9_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU9_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 8.350e-49
Identity = 89/159 (55.97%), Postives = 112/159 (70.44%), Query Frame = 0
Query:   36 NVRRRFHGTSSSPQCNFVVDLKGR--PCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLYFSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDKCPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYAL 192
            N+R+RFHGTS +  CNF++D +G   PC    C+VCNIC  GF L  NV  TA+ T + LRYG G+Y SSVSGK+NDYA +S K GS+  ++RCMFVANV  G A+ T+ ++L +  CPP GY SVVGEV  G  LN DE+VVYK  A +P+ LIVYAL
Sbjct:  381 NLRQRFHGTSCNAGCNFMIDPQGATAPCGLSSCSVCNICMLGFNLGKNVARTARATRFPLRYGPGVYLSSVSGKANDYAGRSAKTGSDGTELRCMFVANVAVGKAFNTKSSNLPQSACPPLGYQSVVGEV--GQALNFDEVVVYKEAAVLPTHLIVYAL 537          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig168.4869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKU8_ECTSI7.260e-9379.55PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU6_ECTSI4.740e-7672.39PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS87_ECTSI4.210e-7265.52PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS88_ECTSI6.500e-6057.14PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS86_ECTSI1.210e-5957.71PARP catalytic domain-containing protein n=2 Tax=E... [more]
D7FXR1_ECTSI1.190e-5453.11PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JBF5_9PHAE2.460e-5452.75PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU5_ECTSI1.050e-5154.80TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
D7FXR2_ECTSI2.010e-4953.67PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU9_ECTSI8.350e-4955.97PARP catalytic domain-containing protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.228.10coord: 16..192
e-value: 1.6E-31
score: 111.6
NoneNo IPR availablePANTHERPTHR31681FAMILY NOT NAMEDcoord: 33..191
NoneNo IPR availablePANTHERPTHR31681:SF3coord: 33..191
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 30..191
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPFAMPF00644PARPcoord: 63..165
e-value: 3.8E-11
score: 43.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig168contigEcto-sp13_S_contig168:19891..21966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig168.4869.1mRNA_Ecto-sp13_S_contig168.4869.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig168 18990..23857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig168.4869.1 ID=prot_Ecto-sp13_S_contig168.4869.1|Name=mRNA_Ecto-sp13_S_contig168.4869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
MVKSSNNARGGSRATFFQVPGNIYRKYVGYKKAKRNVRRRFHGTSSSPQC
NFVVDLKGRPCSSKECNVCNICTNGFELRGNVGGTAKTTGYRLRYGEGLY
FSSVSGKSNDYAQQSEKVGSECKKVRCMFVANVNAGNAYLTEQASLGKDK
CPPAGYDSVVGEVRAGGGLNHDELVVYKNEAAIPSCLIVYALP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012317Poly(ADP-ribose)pol_cat_dom