mRNA_Ecto-sp13_S_contig1679.4862.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: D8LPV4_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV4_ECTSI) HSP 1 Score: 348 bits (893), Expect = 5.960e-119 Identity = 180/214 (84.11%), Postives = 182/214 (85.05%), Query Frame = 2
Query: 2 RRMLPGEGRVHWPVNIVWGGRQTYR*QFCYFARSAVSRPLLPRLPRIYLCVLGLCCFFLFSQLGAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 643
RRM GEGRVHWPVNIVWGG + P LP + VLG FFL SQLGAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLT KGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK
Sbjct: 2 RRMPHGEGRVHWPVNIVWGGGKPTSNSSAIALALPFLAPFSLVLPVYFFFVLGRLFFFL-SQLGAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLTEKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 214
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A6V1Q1R9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q1R9_HETAK) HSP 1 Score: 178 bits (451), Expect = 2.520e-50 Identity = 90/153 (58.82%), Postives = 108/153 (70.59%), Query Frame = 2
Query: 185 QLGAVDATQATNLAQKYGVQGYPTIKAFPAGPKK-KAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEK 640
++ AVDAT LAQ+YG+ G+PTIK F AGPK +DY GPREA IV YA +LE SG VP +LTG+ D+ CGG +ICV+AALPHILDSGKAGRE Y+E + AKK R S W EG AQPA EEA GLTFG+PA++A+S EK
Sbjct: 222 KVAAVDATVHQRLAQEYGITGFPTIKVFKAGPKLGDPEDYRGPREAPAIVQYALELLEASGVVPSIEELTGQRAFDDACGGKRICVLAALPHILDSGKAGREEYLERLVQVAKKVRGKPFSFFWFEGTAQPAAEEAYGLTFGFPALVAVSAEK 374
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A7S2V150_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V150_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.920e-47 Identity = 85/152 (55.92%), Postives = 105/152 (69.08%), Query Frame = 2
Query: 188 LGAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQ-DYNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEK 640
+GAVDAT+ LA Y +QG+PT+K FPAGPK K YNGPREA+ IV YA MLE +G P P+LT + D C G +ICV+AALPHILDSGK+GR YIE + AKK R +SL W EGG Q LE + GLTFG+PA++A++ EK
Sbjct: 218 VGAVDATEHKELAATYQIQGFPTLKVFPAGPKTKDPLPYNGPREASDIVQYALNMLEEAGIDPAVPELTKQKEFDSACSGKRICVLAALPHILDSGKSGRNEYIEMLINVAKKLRGKPISLFWFEGGMQVELEASFGLTFGFPALVAVNKEK 369
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A835YTP9_9STRA (Protein disulfide isomerase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP9_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.190e-45 Identity = 85/153 (55.56%), Postives = 105/153 (68.63%), Query Frame = 2
Query: 191 GAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVPK--TPQLTGKGVIDEKCGGT-KICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEK 640
G+VD TQ +LAQ+Y V+G+PTIK FP G K YNG R A I AT +LE SG+VP PQ+T + V+DE CGG +ICVI+ LPHI D G A RE +IET++ AAKK+RN S +WTE GAQP LE+A LTFG PA +AIS +K
Sbjct: 213 GSVDCTQYEDLAQRYDVKGFPTIKIFPHGSKHAPIPYNGERSAGAIAAEATRILEESGYVPTLPVPQITSQKVLDETCGGAQRICVISVLPHIADGGAAAREAHIETIKAAAKKARNHMFSYLWTEVGAQPNLEQALSLTFGTPAAVAISKDK 365
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A7S3M1T2_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1T2_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.080e-42 Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 2
Query: 185 QLGAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVP--KTPQLTGKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 643
+LGAVDATQ LAQKYGV+GYPTIK FP G KKK Y GPREAAGIVDYA L S + +LT V CG K+C + LPHILDSG GR Y++T + A + R ++ +WTE AQPALE + +P + +SVEKK
Sbjct: 41 RLGAVDATQHGELAQKYGVKGYPTIKVFPGGAKKKGSTYKGPREAAGIVDYARSTLGGSAQAASIELQELTSPEVFSSTCGSAKLCAMLFLPHILDSGAQGRNAYLDTFKEIAAEFRRMPIAFVWTEANAQPALESGFSINGNFPTLAMVSVEKK 195
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A7S0SQQ7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQQ7_9STRA) HSP 1 Score: 156 bits (394), Expect = 5.920e-42 Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 2
Query: 185 QLGAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGT-KICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 643
+LGAVDAT +NLA +YGV+GYPTIK F AG K A+DYNGPREAAGIV+YA L+ +G P P++T + + C + KICVI +PHILDSG GR YI AK +R LS +W E G+QP LEE+ + YP + +S EKK
Sbjct: 223 KLGAVDATVHSNLASQYGVKGYPTIKLFSAGKKTGAKDYNGPREAAGIVEYALKTLDDAGVPPNIPEITKPNIFSDSCNASGKICVILFVPHILDSGAKGRNNYISQFIEVAKSNRGQPLSFLWVEAGSQPELEESLEINQAYPGLAVLSYEKK 376
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A7S1CKD4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKD4_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.630e-41 Identity = 77/156 (49.36%), Postives = 99/156 (63.46%), Query Frame = 2
Query: 185 QLGAVDATQATNLAQKYGVQGYPTIKAFPAGPKK---KAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 643
+ GAVDAT ++LA ++GVQGYPTIK F AG K AQDY G R A ++D AT + E +G P +LT + V DE C G KICV+A LPH+LDSGK GRE Y+ + AK R +W G QPA+EE GLTFG+PA +A++ K+
Sbjct: 63 KFGAVDATVHSDLASQFGVQGYPTIKYFNAGAKSGPFDAQDYQGGRTARDLIDAATRVQEETGVAPGPVELTSQAVWDENCSGKKICVLAVLPHVLDSGKEGREAYLADLTQVAKDKRKLPFRFLWAGAGDQPAIEEQLGLTFGFPAAVAVNQGKE 218
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A6G0X5N7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5N7_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.250e-40 Identity = 77/155 (49.68%), Postives = 102/155 (65.81%), Query Frame = 2
Query: 185 QLGAVDATQATNLAQKYGVQGYPTIKAF--PAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 643
+LGA+DAT A +YG++G+PTIK F A AQ+Y GPR+AAGIV YA LE+ G K P++T V+++ C G ICV+A LP+I+DSG AGRE Y++ V GAAK R W +GG Q LE A LTFGYPA++AIS++K+
Sbjct: 213 KLGAIDATANERKAGEYGIKGFPTIKLFGPTASSSSDAQEYQGPRQAAGIVGYALNKLEKLGGGLKVPEITSTKVLNDHCAGKSICVVALLPNIIDSGAAGRESYLKEVDGAAKLVRGKPFRFSWVQGGDQDKLESAFDLTFGYPALVAISLDKQ 367
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A3R7D4L0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D4L0_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.450e-40 Identity = 77/155 (49.68%), Postives = 98/155 (63.23%), Query Frame = 2
Query: 185 QLGAVDATQATNLAQKYGVQGYPTIKAF--PAGPKKKAQDYNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 643
+LGA+DAT A A +YG++G+PTIK F A AQDY GPR+A+GIV YA LE+ G K P++T + + C G ICV+A LPHI DSG GR Y+ V GAAK R W +GG Q LE+A LTFGYPAV+AIS++K+
Sbjct: 240 KLGALDATAAERKASEYGIKGFPTIKLFGPTASSASDAQDYQGPRQASGIVSYALHQLEKLGGGLKVPEITSMSTMQDHCAGKSICVVAVLPHIFDSGAKGRTDYLSQVEGAAKLVRGKPFRFSWVQGGDQNKLEQAFDLTFGYPAVVAISLDKQ 394
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Match: A0A7S2EU45_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EU45_TRICV) HSP 1 Score: 149 bits (375), Expect = 1.960e-40 Identity = 79/155 (50.97%), Postives = 97/155 (62.58%), Query Frame = 2
Query: 188 LGAVDATQATNLAQKYGVQGYPTIKAFPAGPKKKAQD---YNGPREAAGIVDYATGMLERSGWVPKTPQLTGKGVIDEKCGGT-KICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEK 640
LG VDAT LA +YGV+GYPTIK FP G K A D Y G R IV YA ++R+G + P+LTG V+ CGGT KICV+AALPHILDSG GR Y ET+ A+ R + +W EG +Q LE A +TFGYPAV A+S++K
Sbjct: 76 LGVVDATVEERLASQYGVRGYPTIKVFPGGANKSASDASEYEGGRTTQQIVQYALAEVDRTGVPKEIPELTGPDVLKSSCGGTNKICVLAALPHILDSGAEGRNRYRETLASVARTFRGSAFNFVWFEGSSQLELESAMEMTFGYPAVAALSMDK 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1679.4862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1679.4862.1 >prot_Ecto-sp13_S_contig1679.4862.1 ID=prot_Ecto-sp13_S_contig1679.4862.1|Name=mRNA_Ecto-sp13_S_contig1679.4862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp APHASRGRKGPLACEYCLGGEANLPLTVLLFRSLCRFSPPSPSPSPYISLback to top mRNA from alignment at Ecto-sp13_S_contig1679:14280..15927+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1679.4862.1 ID=mRNA_Ecto-sp13_S_contig1679.4862.1|Name=mRNA_Ecto-sp13_S_contig1679.4862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1679:14280..15927+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1679:14280..15927+ >mRNA_Ecto-sp13_S_contig1679.4862.1 ID=mRNA_Ecto-sp13_S_contig1679.4862.1|Name=mRNA_Ecto-sp13_S_contig1679.4862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1679:14280..15927+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |