prot_Ecto-sp13_S_contig16785.4858.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16785.4858.1
Unique Nameprot_Ecto-sp13_S_contig16785.4858.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length562
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16785.4858.1 vs. uniprot
Match: D7FRR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR7_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.770e-21
Identity = 90/230 (39.13%), Postives = 106/230 (46.09%), Query Frame = 0 
Query:   76 PAASSSDGDTSSKVSPSRGTVRHRPCDHDSEGPPPRRARLDGENDPGGHASVNGQEEDE-GDALFSSSVGSDGGGEVFPEENAVTDLDDAPSEMKSEGYDFDGCSDGVATPPPRDGVEERDDNVQDTRSGEISQHVNLGGGVEEAKGRECDQDPGNVGGTRQGTVDEH---RKGERTNSVDVVGDDGSGGDLVIAGAGASTAGVLRLEGGRTCDERPVQDTQTHDSATLQ 301
            P+ SS  G     +       R  P   D++  P RR  +          S NGQE+D+ GDALFSSSV + GGG  FPE + V D DDAPSEM    Y FDG  DGVAT                                                   +GTVDE    R+     SVD +G DGS GD VIAGAGA+ AGV RL+ GRT ++ P QDTQT  SATLQ
Sbjct:   60 PSTSSFSGSDEEDIDGDSDAARESPLRGDAKWRPWRRVDM-----ARNKYSGNGQEDDDVGDALFSSSVCNQGGGAAFPEADGVADFDDAPSEMDCGDYSFDGGFDGVATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTVDERLWCRQNGCPYSVDGLGGDGSSGDSVIAGAGANAAGVHRLKRGRTYEQGPFQDTQTDGSATLQ 284
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16785.4858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRR7_ECTSI2.770e-2139.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16785contigEcto-sp13_S_contig16785:1102..2831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16785.4858.1mRNA_Ecto-sp13_S_contig16785.4858.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16785 1102..2831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16785.4858.1 ID=prot_Ecto-sp13_S_contig16785.4858.1|Name=mRNA_Ecto-sp13_S_contig16785.4858.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
MAQGQDVANSGDGGANQTRGGGLGEQSSSSISSSDDKDSDGDSDGDRDEL
DGRGQRGHPQWASWLSNIMQGSSVSPAASSSDGDTSSKVSPSRGTVRHRP
CDHDSEGPPPRRARLDGENDPGGHASVNGQEEDEGDALFSSSVGSDGGGE
VFPEENAVTDLDDAPSEMKSEGYDFDGCSDGVATPPPRDGVEERDDNVQD
TRSGEISQHVNLGGGVEEAKGRECDQDPGNVGGTRQGTVDEHRKGERTNS
VDVVGDDGSGGDLVIAGAGASTAGVLRLEGGRTCDERPVQDTQTHDSATL
QVCHRGMDVVGSPLDGGGDGGDASPGGEGLPESLDNVRDTSVRWLDREVY
HGGRADDDRPEGHVEYLCEGGVDGSGSASGGKSRKNRSDSGGHGMKTGRK
GTTSLSDRGVKDGSFQGGGLSRGQGEDTEMRATSRLTSVAPLVGIEGGLN
ADDHMGRGLDTAAGANARGGSSTSEGRACGRRRFGLARPRKTGPGSDAGS
SFVRVPRVSLQPQSMMELRGGDVDATAANAGAGAREASVQSRRNRQDGSY
SGPTKEERVWT*
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