mRNA_Ecto-sp13_S_contig16782.4856.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16782.4856.1
Unique NamemRNA_Ecto-sp13_S_contig16782.4856.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A6H5JXE6_9PHAE (Calcium-transporting ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXE6_9PHAE)

HSP 1 Score: 617 bits (1592), Expect = 2.830e-211
Identity = 308/338 (91.12%), Postives = 318/338 (94.08%), Query Frame = 1
Query:    1 QVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDIGGEDGREIAGLFCQDYTDYVENTCTDAREYICYDEFFDT----FANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSFCGYATPKEQRLSSSAPGGGPNV 1002
            +VAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALL+VFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDIGGEDGREIAGL+CQDYTDYVENTCTDAREYICYDEFFDT    F NDED         MECSK DYTHYTILFNAFV+CQ+FNELNARSIFDDWNIFRGLH NPLFAAVIV+TVILQFLIVE GAEFTKTAHLSSKEWL++VALGAIALPLGVFMRFIP  ENPSSFCGYATPKEQRLSS+APGG P+V
Sbjct:  779 KVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLIVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDIGGEDGREIAGLYCQDYTDYVENTCTDAREYICYDEFFDTSGDFFTNDEDVDTFYDDCDMECSKNDYTHYTILFNAFVFCQVFNELNARSIFDDWNIFRGLHNNPLFAAVIVVTVILQFLIVEMGAEFTKTAHLSSKEWLVTVALGAIALPLGVFMRFIP--ENPSSFCGYATPKEQRLSSAAPGGAPHV 1114          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A7S2XZI8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZI8_9STRA)

HSP 1 Score: 322 bits (826), Expect = 9.120e-106
Identity = 182/332 (54.82%), Postives = 224/332 (67.47%), Query Frame = 1
Query:    1 QVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDI-------------GGEDGREIA------GLFCQDYTDYVENTCTDAREYICYDEFFDTFANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVK-ENPSSF 936
            +VA  ASDIVILDDRFSSIVRAIMWGR VYDNIRKFLQFQLTVNVVALLLVFIG+++G DPPLN +MMLWVNLIMD++GALALGTE PT+ LL+RRPY+RN  LIS+PM RNI+ QS FQL+LLL LLY    L+ GV   N CK W +             G E+G +I       GL  +   +Y      D  E  CY+E++  F +            +EC   D+TH++I+FN FV+CQIFNE NARSI +  N+F GLHKN LF  VI  T ++Q  IVE   +F KT +L+  +W+  VA GAIALP+GV MR IP + E+P +F
Sbjct:   20 KVAMTASDIVILDDRFSSIVRAIMWGRCVYDNIRKFLQFQLTVNVVALLLVFIGSVTGYDPPLNAVMMLWVNLIMDSLGALALGTEMPTMELLERRPYRRNCSLISKPMMRNILSQSAFQLVLLLGLLYGGANLY-GVHNGNFCKRWFVEEGVRTSWNPDTYGMEEGGDITCTTMLTGLQGR-LDEYPACNMHDNGE--CYEEYYSKFED-------YSLDCLECDAEDFTHFSIIFNTFVFCQIFNEFNARSIKNKLNVFEGLHKNMLFLGVIFFTCLMQIFIVEVAGDFVKTTNLTIVQWVSCVAWGAIALPVGVLMRLIPPRDEDPRTF 340          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A835ZDK6_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK6_9STRA)

HSP 1 Score: 338 bits (866), Expect = 2.320e-103
Identity = 183/332 (55.12%), Postives = 229/332 (68.98%), Query Frame = 1
Query:    1 QVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDI---------GGEDGREIA---GLFCQDYTDYVENT--CTDAREYICYDEFFDTFANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSFCGYATP 954
            +VAQNASDIVILDDRFSSIVRAIMWGR VYDNIRKFLQFQLTVNVVAL +VFIG+++G DPPLN +MMLWVNLIMDTMGALALGTEAPTL LL R+P+ R A L+S  + R+I V S FQL +LL LL+    LF  V+K+N C+ + +           E  +++A   G  C   T     T  C       CYD+ F  +A+ +D          +C+ +DY HY+++FN FV+ QI NE NARSI D+WNI RG+  NP+F A+I+IT+ LQ  ++E G EFTKTA L++++WLI+ ALG IA PLGV MRFIPV E  S + GY  P
Sbjct:  837 KVAQNASDIVILDDRFSSIVRAIMWGRSVYDNIRKFLQFQLTVNVVALSIVFIGSVAGFDPPLNAVMMLWVNLIMDTMGALALGTEAPTLDLLKRKPFSRRASLLSYKIMRHIGVMSVFQLAMLLGLLFAPDVLFDDVRKNNPCEQYVVKPNVADLAWSPETFQQVANCAGAACAGLTTCASFTAACGGGDNGACYDDEFAQYADFDDKCFK------DCTSFDYVHYSLIFNTFVFAQIANEFNARSIGDEWNILRGIGGNPMFIAIILITIGLQIFVIEVGGEFTKTAGLTAEQWLITSALGLIAFPLGVLMRFIPVGERMSDYAGYDPP 1162          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A482RTL3_9ARCH (Cation_ATPase_C domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTL3_9ARCH)

HSP 1 Score: 314 bits (804), Expect = 2.370e-101
Identity = 175/344 (50.87%), Postives = 232/344 (67.44%), Query Frame = 1
Query:    1 QVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDIGGEDG--------REIAGLF-CQDYTDYVENTCTDAREYICY--DEFFDTFANDEDXXXXXXXXX--MECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSF---CGYATPKEQRLSSSAP 984
            +VAQ+ASDIVILDD+FSSIV+AI WGR VYDNIRKFLQFQL+VN+VALL+VFI ALSG + PLN + +LWVNL+MDTMGALALGTE PT  LL+R+PYKR A LIS PM RNI+VQS FQL+LLL LL+     F  V +   C  +D+ G            + AG   C  + DY   +  D   Y CY  +  F   A +             +EC ++DYTH +I+FN F++CQ+FNE  +R++FD+WN F+ +  N +F  V ++T+ LQ +++E G EF KT+ L++ +WLI+VALGAI LP+GV MR IPVKE+P+SF    G+    E+ +SS +P
Sbjct:   66 KVAQSASDIVILDDKFSSIVKAISWGRCVYDNIRKFLQFQLSVNLVALLIVFIAALSGFEVPLNAVQLLWVNLVMDTMGALALGTEVPTPELLERKPYKRQASLISWPMRRNIVVQSCFQLVLLLILLFQGAQFFD-VHEGVVCAHYDVKGSSTLWNVNTLEEDPAGTIGCSTFKDYCSGSSAD---YDCYLNNRMFPGAAEEHSFSDYKDYASTCLECQEFDYTHGSIIFNTFIFCQVFNEYTSRNLFDEWNPFKNILSNYVFLCVSIVTIGLQIILIEFGGEFLKTSPLTATQWLITVALGAIGLPIGVLMRLIPVKEDPASFFDNSGHLP--EEVVSSQSP 403          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A7S2STS2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS2_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.830e-99
Identity = 176/334 (52.69%), Postives = 218/334 (65.27%), Query Frame = 1
Query:    4 VAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGAL--SGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACK----------AW-DIGGEDGREIAGLFCQDYTDYVENT----------CTDAREYICYDEFFDTFANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSF 936
            VA+ A+DIVILDD+FSSI+ AI WGR VYDNIRKFLQFQLTVNVVALLLVFI AL    +DPPLN + +LWVNLIMDTMGALALGTE PT  LL R PYKR A L+SRP+ R+I+ QS FQL+LLL LL  +   +  V   N C           AW + G   G     + C  +   V             C++ R+  CY++ +D F    +         + C K+DYTH+TI+FN FV+CQIFNELNARSI DDW+I +G+HKN +F  +I+ TV +Q  IVE G EFTKT+ LS  EW+ +  LG IA+P+G  MRFIPV E+P SF
Sbjct:  167 VAKGAADIVILDDKFSSIIVAIKWGRCVYDNIRKFLQFQLTVNVVALLLVFIVALIPEFEDPPLNAVQLLWVNLIMDTMGALALGTEQPTEELLKRPPYKREASLLSRPIIRHILAQSFFQLVLLL-LLLTLGDAWFNVDSGNVCDDYGDTGRNHWAWFENGNYQGNGKGTVGCPTFLQGVLRNGSSPTDLKLDCSNDRDQSCYEDGYDGFDL-TNKHLTFEDVCLRCKKHDYTHFTIIFNTFVFCQIFNELNARSIGDDWHILKGIHKNFIFIFIIIFTVCMQIFIVEVGGEFTKTSSLSPMEWVRTAGLGFIAIPVGFLMRFIPVAEDPKSF 498          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A482SEH8_9ARCH (HAD family hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEH8_9ARCH)

HSP 1 Score: 315 bits (808), Expect = 1.440e-97
Identity = 175/335 (52.24%), Postives = 223/335 (66.57%), Query Frame = 1
Query:    1 QVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNAC---------KAWDIGGEDGREIAGLF-CQDYTDYVENTCTDAREYICYDEFF---DTFANDE----DXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSFCGYATP 954
            +VAQ+ASDIVILDD+FSSIV+AI WGR VYDNIRKFLQFQL VN+VALLLVFI ALSG + PLN + +LWVNL+MDTMGALA G E PT  LL R+PYKR A +IS PM RNI+VQ+ FQLILLL LLY+   +F GV +  +C           WD+  +   +  G F C ++ DY      D + Y C+   F   D     +    D          EC   DYTH TI+FN F++ Q+FNE NARSIFD+WN+F G+  NP+F  V +IT+  Q ++VE G +F KT+ L+  +W I+VALGAI+LP+G+ MRFIPVKE+P+ F   + P
Sbjct:  462 KVAQSASDIVILDDKFSSIVKAISWGRCVYDNIRKFLQFQLVVNLVALLLVFIAALSGFEVPLNAVQLLWVNLVMDTMGALAEGMELPTPELLQRKPYKRQASMISSPMKRNILVQAAFQLILLLVLLYNGAQMF-GVTEGISCFEYNVDSNNLKWDLSTKKIDDATGTFTCANFNDYC-----DGKGYGCFHLKFSLSDGITTYDMAMSDLKEFQTECLSECKLLDYTHNTIIFNTFIFAQVFNEYNARSIFDEWNMFHGIEHNPVFIVVTIITIGFQIILVEFGGDFLKTSPLTINQWFITVALGAISLPIGMLMRFIPVKEDPADFFDNSMP 790          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A7S3Y3V0_HETAK (Calcium-transporting ATPase n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3V0_HETAK)

HSP 1 Score: 311 bits (798), Expect = 4.570e-94
Identity = 166/332 (50.00%), Postives = 215/332 (64.76%), Query Frame = 1
Query:    1 QVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACK---------AWDIGGEDGREIAGLFCQD----YTD-------YVENTCTDAREYICYDEFFDTFANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSF 936
            +VAQ ASDIVILDD+FSSIV+AI+WGR VYDNIRKFLQFQLTVNVVAL+LVF+GA+SG   PLN +MMLWVNLIMD+MGALALGTE PT A+LDR+PYKR A L+SRPM+RNI+ QS FQL LL  LLY   ++F    + N C          AWD    D  +     C D    Y+        Y    C D    + Y++F D                  C  YDYTH+T++F  FV+CQ+FNE NARSI DD N+F+GL  N +F  +IV T+++Q ++VE      +T+HL++ +W   + LG I+LP+G  MRF+P++E+  +F
Sbjct:  760 KVAQEASDIVILDDKFSSIVKAILWGRSVYDNIRKFLQFQLTVNVVALILVFVGAVSGLGSPLNAVMMLWVNLIMDSMGALALGTETPTPAMLDRKPYKREAALVSRPMWRNILCQSAFQLALLFGLLYGGKSMFGLEHEGNYCTVWKLQDSSAAWDSATGDRADGGDFTCADIETSYSSCIRRGGGYANTDCLDEAGLLSYEDFEDKCFK-------------TCFDYDYTHFTLIFTTFVFCQVFNEFNARSIKDDRNVFKGLASNRMFIGIIVFTILVQVVLVEGAGFLLETSHLTAGQWFACLGLGTISLPVGFLMRFLPMEEDEQTF 1078          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A7S2FZ34_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZ34_9STRA)

HSP 1 Score: 295 bits (755), Expect = 1.010e-93
Identity = 167/315 (53.02%), Postives = 199/315 (63.17%), Query Frame = 1
Query:    1 QVAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDIGGEDGREIAGLFCQDYTDYVENTCTDAREYICYDEFFDTFANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSFCGY 945
            +VA+ ASDIVI+DDRF+SIV+A+MWGR V+DNIRKFLQFQLTVNVVAL+L F+ A  G +PPLN +MMLWVNLIMDTMGALALGTEAPT ALLDR+P KRNA L+SR M+RNI+VQS +QL LLL LL +    F GV+K +                                                                      H+TI+FN FV+CQIFNELNARSI DD NIF+GL  N +F  VI+ TVI Q  +VE G +F +T  L+  EW  SVALGA+ALPLGV MRFIPVKE+PS + GY
Sbjct:  187 EVAKEASDIVIMDDRFASIVKAVMWGRCVFDNIRKFLQFQLTVNVVALVLTFLSATLGYEPPLNAVMMLWVNLIMDTMGALALGTEAPTEALLDRKPLKRNASLVSRVMWRNILVQSIYQLALLLILLENGDLYFDGVEKGSV--------------------------------------------------------------------RHFTIIFNVFVFCQIFNELNARSIGDDINIFKGLANNSMFQMVILFTVITQVGLVELGGDFLRTTPLTPTEWYQSVALGAVALPLGVLMRFIPVKEDPSDYAGY 433          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A7S2DQE9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQE9_9STRA)

HSP 1 Score: 290 bits (741), Expect = 3.170e-93
Identity = 156/316 (49.37%), Postives = 198/316 (62.66%), Query Frame = 1
Query:    4 VAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILLLWLLYDIHTLFPGVQKDNACKAWDIGGEDGREIAGLFCQDYTDYVENTCTDAREYICYDEFFDTFANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSFCGYAT 951
            VA+ ASDIVI DDRF SIV+A++WGR V+DNIRKFLQFQLTVN VAL+L F+ AL+G +PPLN +MMLWVNLIMDTMGALALGTEAPT ALLDRRP KR APL++R M RNI VQS +QL+LL+ +L     +FPG++ ++                                                                      HYT+LFN FV+CQ+FNELNARSI +D NI + +H+NP+F  ++V TVI+Q+ IV+ G +FTKTA L   +W+ SVALGA+ +P+G  MR IPV EN + F GY +
Sbjct:   71 VAKEASDIVITDDRFVSIVKAVVWGRCVFDNIRKFLQFQLTVNAVALILTFLTALAGYEPPLNAVMMLWVNLIMDTMGALALGTEAPTNALLDRRPLKRTAPLVNRTMIRNIAVQSIYQLVLLVSMLKLGDKMFPGIELNST--------------------------------------------------------------------VHYTLLFNVFVFCQVFNELNARSITNDMNILKDMHRNPMFQIILVFTVIMQYGIVQYGGDFTKTAPLDQTQWIHSVALGALTIPIGFLMRLIPVSENMNDFAGYTS 318          
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Match: A0A225X3I1_9STRA (Calcium-transporting ATPase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225X3I1_9STRA)

HSP 1 Score: 303 bits (777), Expect = 2.290e-91
Identity = 161/326 (49.39%), Postives = 213/326 (65.34%), Query Frame = 1
Query:    4 VAQNASDIVILDDRFSSIVRAIMWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNLIMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLILL-LWLLYDIHTLFPGVQKDNACKAWDIGGE--------------DGREIAGLFCQDYTDYVENTCTDAREYICYDEFFDTFANDEDXXXXXXXXXMECSKYDYTHYTILFNAFVYCQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFTKTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSF 936
            +A+ ASDI+I+DD+FSSI +A++WGR VYDNIRKFLQFQLTVN+VAL++ FI A++GK+PPLN +MMLW+NLIMDTMGALALGTEAPT ALLDRRPYK+ A L+ R M +NI+VQS FQL+L+ L L+Y   T   G    N C +W+   +              +G     L C+DY    +N+        C D+                     CS +DY HYT++FN FV+CQ+FNE NAR   +DW +F GL  NPLF  +I IT+ +Q L+ E G  F KT+ +S + WLI + LGA++LP+GV MR+IPV E+P +F
Sbjct:  733 LAKEASDIIIMDDKFSSIRKAVLWGRCVYDNIRKFLQFQLTVNIVALVVTFISAVTGKEPPLNSVMMLWINLIMDTMGALALGTEAPTEALLDRRPYKKTAKLLGRCMVKNIIVQSIFQLLLVFLLLIYGAETF--GYHDGNKCVSWEYSVKAKFPTLTNETCVTVNGDNCWSLSCEDYK---KNSTVLDYPVSCLDD--------------------SCSAHDYRHYTLIFNTFVFCQLFNEFNARRTNNDWRVFSGLVSNPLFIMIIAITLAVQVLLAEFGGNFIKTSSISFEHWLICIGLGALSLPVGVIMRWIPVTESPDAF 1033          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16782.4856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXE6_9PHAE2.830e-21191.12Calcium-transporting ATPase n=2 Tax=Ectocarpus Tax... [more]
A0A7S2XZI8_9STRA9.120e-10654.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZDK6_9STRA2.320e-10355.12Calcium-transporting ATPase n=1 Tax=Tribonema minu... [more]
A0A482RTL3_9ARCH2.370e-10150.87Cation_ATPase_C domain-containing protein (Fragmen... [more]
A0A7S2STS2_9STRA1.830e-9952.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SEH8_9ARCH1.440e-9752.24HAD family hydrolase n=1 Tax=archaeon TaxID=190666... [more]
A0A7S3Y3V0_HETAK4.570e-9450.00Calcium-transporting ATPase n=5 Tax=Heterosigma ak... [more]
A0A7S2FZ34_9STRA1.010e-9353.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DQE9_9STRA3.170e-9349.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A225X3I1_9STRA2.290e-9149.39Calcium-transporting ATPase n=2 Tax=Phytophthora T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16782contigEcto-sp13_S_contig16782:15..3812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score580.1
Seed ortholog evalue6.2e-163
Seed eggNOG ortholog2880.D7G3Y5
Model size1034
KEGG koko:K01537,ko:K05850
KEGG TC3.A.3.2
KEGG Pathwayko04020,ko04022,ko04024,ko04261,ko04925,ko04970,ko04972,map04020,map04022,map04024,map04261,map04925,map04970,map04972
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.calcium-transporting ATPase activity
EggNOG OGsCOG0474@1,KOG0204@2759
EC3.6.3.8
Cds size936
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16782.4856.1prot_Ecto-sp13_S_contig16782.4856.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16782 44..3743 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462880.0676663-UTR-Ecto-sp13_S_contig16782:14..431681462880.0676663-UTR-Ecto-sp13_S_contig16782:14..43Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16782 15..43 -
1681462880.1548874-UTR-Ecto-sp13_S_contig16782:3743..38121681462880.1548874-UTR-Ecto-sp13_S_contig16782:3743..3812Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16782 3744..3812 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462880.0850558-CDS-Ecto-sp13_S_contig16782:43..1301681462880.0850558-CDS-Ecto-sp13_S_contig16782:43..130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16782 44..130 -
1681462880.094214-CDS-Ecto-sp13_S_contig16782:970..11021681462880.094214-CDS-Ecto-sp13_S_contig16782:970..1102Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16782 971..1102 -
1681462880.1024594-CDS-Ecto-sp13_S_contig16782:1510..16521681462880.1024594-CDS-Ecto-sp13_S_contig16782:1510..1652Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16782 1511..1652 -
1681462880.1116626-CDS-Ecto-sp13_S_contig16782:1984..20941681462880.1116626-CDS-Ecto-sp13_S_contig16782:1984..2094Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16782 1985..2094 -
1681462880.1221821-CDS-Ecto-sp13_S_contig16782:2456..26301681462880.1221821-CDS-Ecto-sp13_S_contig16782:2456..2630Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16782 2457..2630 -
1681462880.1319222-CDS-Ecto-sp13_S_contig16782:3167..33941681462880.1319222-CDS-Ecto-sp13_S_contig16782:3167..3394Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16782 3168..3394 -
1681462880.141518-CDS-Ecto-sp13_S_contig16782:3679..37431681462880.141518-CDS-Ecto-sp13_S_contig16782:3679..3743Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16782 3680..3743 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16782.4856.1

>prot_Ecto-sp13_S_contig16782.4856.1 ID=prot_Ecto-sp13_S_contig16782.4856.1|Name=mRNA_Ecto-sp13_S_contig16782.4856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MWGRGVYDNIRKFLQFQLTVNVVALLLVFIGALSGKDPPLNPLMMLWVNL
IMDTMGALALGTEAPTLALLDRRPYKRNAPLISRPMFRNIMVQSTFQLIL
LLWLLYDIHTLFPGVQKDNACKAWDIGGEDGREIAGLFCQDYTDYVENTC
TDAREYICYDEFFDTFANDEDVDTFYDDCDMECSKYDYTHYTILFNAFVY
CQIFNELNARSIFDDWNIFRGLHKNPLFAAVIVITVILQFLIVETGAEFT
KTAHLSSKEWLISVALGAIALPLGVFMRFIPVKENPSSFCGYATPKEQRL
SSSAPGGGPNV*
back to top

mRNA from alignment at Ecto-sp13_S_contig16782:15..3812-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16782.4856.1 ID=mRNA_Ecto-sp13_S_contig16782.4856.1|Name=mRNA_Ecto-sp13_S_contig16782.4856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16782:15..3812- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGGCCCAAAACGCGTCCGACATAGTTATCCTCGATGACCGGTTCTC TTCCATTGTGAGGGCTATCATGTGGGGCCGGGGGGTGTACGACAACATCC GCAAGTTCCTTCAGTTCCAGTTGACTGTCAATGGTAAGCCCGCCCTCTTG GTGTTGATGCTGCTACTGCTGGTGTTGCTACGTAATTGTTCGTGTGGTCG ATCGGTGTTGCTGTTGCTGCTGTTGTTGTTGAGGAACCTTGCTGAACCGA CCATTGAAATCCTCTGTTGGTAATTCAGTTCTTGATATATTTGCAAAATT ATCATTGACTAGGTACAAGACCTCACGTAGCGGTCTTCGATATAAAACAA GAACAACACCAACGACTCTCCCCCTCCCCCCCCCTTCTCCCCTATTTTCT CCCTCGTGGAACCTCCAGTGGTGGCTCTTCTGCTTGTGTTCATCGGGGCT CTCTCCGGCAAGGACCCCCCCCTCAACCCCCTCATGATGCTCTGGGTCAA CCTCATCATGGACACCATGGGCGCCTTGGCGCTGGGTACGGAGGCACCGA CGCTTGCGCTGCTGGACCGCCGCCCCTACAAGCGGAACGCCCCGCTCATC AGCAGGCCCATGTTCCGCAACATCATGGTCCAGTCCACCTTCCAGGTTTG TGCGTGGATGTATGCTAGGCATCTGTCGTTTTTCGTCATCAGCGGCGAGG GACGGCCTTGTTTCTGGACGTTGGGGGCGGCATGTGGATAGGGACCGCCT TCGCGAGAAACTAAGTTTATGGGGACATAGAGCCGCGAGAGGGGGTACGC AGACCCTAAACCTAACCCAACTTCCCCCACTGTGGTTGTGCTTTATCAAG AGTGTTTTACTTGAACGCAGAACACCGTGCGGAGGCTATTGATGTATAGG CATGAGGTGTTTTTCATGTTACAGCATCCACAAGTCGTATCGCACGGCCA AAGTTTCCATGACATTCCGCAAAGCACCAAGAAAACGGGTGTATGCATAT GAGCCTAGGACACTTCCCCATCGAACGAGAGTTGGAGGCCAACCTCTAGA CTGCTAGGCGCAACGACGTCTGCACCGCGAAAATTCCGACACAACATAAC ACCCCGGTGCTTATCTGTTTACCCATCACTTGGCTGACACCCCGCCTGCG CCCCACGCTCCCGTTTGTCCTCCTCTGCGCAGCTTATCCTGCTGCTGTGG CTCCTGTACGACATTCACACTCTGTTCCCCGGCGTCCAGAAGGACAATGC GTGCAAGGCTTGGGACATCGGGGGGGAGGACGGCAGGGAGATTGCCGGAT TGTTTTGCCAGGATTACACGGACTATGTGGAAAACACATGCACGGATGCG AGAGAGGTGTGGGAGAGGGTGTGTGACGAGTTTTTTTTGTTGTCTTGACC TCAAATCGGCGCTCACAGCATGTGTGCCGGAGAACTTCAACCCGTCGTCA CACAGCTTCTATCCCTCTGGCTCACTAGAGTGGTTGGTGATTATCTGAAG GCCTGTCAGTCGCTGGACCCTCCACCTCCCTCCAGGTGGTGGTAATGCGC TGAGCATATACACGACTGCTGGCTTTGGGTGAGAGCGCGTAACCGTACAA GCATGTTTGGATGCCCGTACATGCCGCATTCCACGCAAAATCACACCCGC ACCTCGTTGCCGTCCATGCCACCGCCTGCGAAATCGATCTCTCGATTGAA TTTATTCTTTTGATTCAGTACATTTGTTATGATGAGTTCTTCGACACCTT CGCCAACGACGAGGACGTGGACACGTTCTACGACGATTGTGACATGGAGT GCAGCAAGTACGACTACACACACTACACGTGAGTGTTGTCGCTGTTGTTG TTGCTGTGGCTGTTACGGTTGACGTCTGCTTCCTGTCGTCGTCTGTCGTT ATTTACTGTTGTTGTTGTTGCTGTTGTTTATGTGTTGCTGTGTCTTGGCG ACTTCGCAGATAGTAACGCCGTTGGCGCTGCATGCAAGTACTTGATTCAG GTATGCATAGCCCGGCCACACGTACTTCCAAGAGCAGGCACTGAAATAGT TCATATACCGCAACAGATTTGTCGTCACAACTCACATTCACCTCTTTCAA TCGAGATATCCCTCGCCCCGCACCCGCCCCGTTTTTGCGAACTTGTCCCC GGCGGCGCAGCATCCTGTTCAACGCATTCGTGTATTGCCAGATCTTCAAC GAGCTTAACGCCCGATCCATCTTCGACGATTGGAACATTTTCAGGGGGTT GCACAAGAACCCCCTTTTCGCTGCGGTTATTGTCATAACCGTCATTCTCC AGGTACAGTATGCTAGCGTTGCACTTGTGTCCTGTCGTCTATTTCTCGGG TCATTTTGCCTTTTATCGCTACGTAGGGGTCACTAAACCGGGGCGCTCAC TGTGTGCCAGGGTAGCGGTGCACTTGTTTTTGGTCATCTCTTTTTTCGTC ATTTTTTTGTTGCAAACAATTTTATTTGGTTGCGTTTGTGGCTGGGACGT TGGCATGCCCCCTTTCTTTGTTGTGAACCATCTCTGTTCCATGATTGCTT GTCGTCGTGGCATGACCCCACCACGGATGATTTTTGTGTTGCGCGATTGA GCGCGGCGCCGATGAGCCCTTTCCCACTACCTCAACAATTTGCGGCACAA AAAAACAATTTTTTTTTTGCAGCCTCGTAACCCCCCTCTGTTTCCCGTTT TGTCGACCAGTTTTTGATCGTGGAGACAGGTGCAGAGTTTACCAAGACTG CTCACCTGAGCAGCAAGGAGTGGCTCATTTCGGTCGCCCTGGGAGCGATC GCGTTACCCCTCGGGGTGTTCATGCGTTTCATCCCGGTAAAGGTAAGAAG ACGCCCCCTTCTGTTGTCGAAAGTATGCATACAAGGAAAGTCCCATGTAC CCGTTCGAGATGTAACGGTAGTCGAAGGTTATGGGTTGGATGAATATGTT GAGTTGTTGTTGCTCTACAGAGTTGTGTTACCCCTCGGGTGGAGGTGCTT TTTAGCCTGAAAAGTTAAAGTAACGCCGCCTCCTTGGTTGTGTTTTCGTT GCTCTTCGAGTTGTGCCATCCCTCGGGTTGTGTTGGTTTTTGTCCGCACA AAGCTACGACGAACATGCCTCCTACTTACATTAGTTTGTGTGCTGCTCTT GTTTGAGCTGTTCTTCCGTTGACAGCGTGCATTCTCATATATGTATGTGG TACGTCCTCACCAGAACCAAAATAACGTGAAAATCCCAAACTATTACTTT TTGTTCAACAAATATAGCAAAACGCACGCACGAAGGGAGATCGTACGTTG TAGACGACTGCTGTGGTGTGTTATTTTCCTCGTGTTTGGCTGTCGCTTGT TTGATACCTCGGGAACAAAAAAGGTGACTGAGGTTGTATCTCGAACGGGT AGTCTTCCTGTGAGGTTATGTCTATTTTCTTTAAAAGGTGAAAGCTTTAC TCAATTGCAGATCTCAGCTCAACCCTGTCTTCAGAACGTAGTGCGACCTG ATGTCAGTGCGGGTGGATGGTATGTAGGAGCACGGGCACTCAACGTGTGT TGTCCGACATGCGATTCCTTGTTTTGGGAATACACCCGACCCAAACGCGA GCGGTATGGTTTTGTCGTCTGATATCACCGTCTCATCCCACACGCCTCTC CCGCACCGTCTTGGCTGGTTCTTGATCCGCAGGAAAATCCGTCGAGCTTT TGCGGGTATGCTACTCCTAAAGAGCAACGACTCTCGTCTTCTGCTCCAGG AGGTGGCCCAAACGTCTGATGTACAAGAGTCGGCGTTGATGTGTAGTT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16782:15..3812-

>mRNA_Ecto-sp13_S_contig16782.4856.1 ID=mRNA_Ecto-sp13_S_contig16782.4856.1|Name=mRNA_Ecto-sp13_S_contig16782.4856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=936bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16782:15..3812- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGGGCCGGGGGGTGTACGACAACATCCGCAAGTTCCTTCAGTTCCA
GTTGACTGTCAATGTGGTGGCTCTTCTGCTTGTGTTCATCGGGGCTCTCT
CCGGCAAGGACCCCCCCCTCAACCCCCTCATGATGCTCTGGGTCAACCTC
ATCATGGACACCATGGGCGCCTTGGCGCTGGGTACGGAGGCACCGACGCT
TGCGCTGCTGGACCGCCGCCCCTACAAGCGGAACGCCCCGCTCATCAGCA
GGCCCATGTTCCGCAACATCATGGTCCAGTCCACCTTCCAGCTTATCCTG
CTGCTGTGGCTCCTGTACGACATTCACACTCTGTTCCCCGGCGTCCAGAA
GGACAATGCGTGCAAGGCTTGGGACATCGGGGGGGAGGACGGCAGGGAGA
TTGCCGGATTGTTTTGCCAGGATTACACGGACTATGTGGAAAACACATGC
ACGGATGCGAGAGAGTACATTTGTTATGATGAGTTCTTCGACACCTTCGC
CAACGACGAGGACGTGGACACGTTCTACGACGATTGTGACATGGAGTGCA
GCAAGTACGACTACACACACTACACCATCCTGTTCAACGCATTCGTGTAT
TGCCAGATCTTCAACGAGCTTAACGCCCGATCCATCTTCGACGATTGGAA
CATTTTCAGGGGGTTGCACAAGAACCCCCTTTTCGCTGCGGTTATTGTCA
TAACCGTCATTCTCCAGTTTTTGATCGTGGAGACAGGTGCAGAGTTTACC
AAGACTGCTCACCTGAGCAGCAAGGAGTGGCTCATTTCGGTCGCCCTGGG
AGCGATCGCGTTACCCCTCGGGGTGTTCATGCGTTTCATCCCGGTAAAGG
AAAATCCGTCGAGCTTTTGCGGGTATGCTACTCCTAAAGAGCAACGACTC
TCGTCTTCTGCTCCAGGAGGTGGCCCAAACGTCTGA
back to top