prot_Ecto-sp13_S_contig16771.4847.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16771.4847.1
Unique Nameprot_Ecto-sp13_S_contig16771.4847.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: D8LMH5_ECTSI (RmlD_sub_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMH5_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.930e-34
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0
Query:    1 RELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            +ELETIKPTHVLNAAGVTGRPNVDWCESHRPET+RANVIGTLNLADLCSSK IHCTIYATG
Sbjct:   45 KELETIKPTHVLNAAGVTGRPNVDWCESHRPETIRANVIGTLNLADLCSSKSIHCTIYATG 105          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A835Z517_9STRA (RmlD_sub_bind domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z517_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.060e-30
Identity = 50/61 (81.97%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    1 RELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            RE++ +KPTHVLNAAGVTGRPNVDWC+ H+PET+RANVIGTLNLAD+CSS+GIHCT+YATG
Sbjct:   48 REIDELKPTHVLNAAGVTGRPNVDWCDLHKPETIRANVIGTLNLADVCSSRGIHCTMYATG 108          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A448YU74_9STRA (RmlD_sub_bind domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU74_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.940e-29
Identity = 45/61 (73.77%), Postives = 56/61 (91.80%), Query Frame = 0
Query:    1 RELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            +EL+ +KPTHV N+AG+TGRPN+DWCE+H+PET+R NVIGTLNLADLC  +GIHCT+YATG
Sbjct:   53 KELDEVKPTHVFNSAGITGRPNIDWCETHKPETIRTNVIGTLNLADLCLERGIHCTVYATG 113          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A7R9WWB4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWB4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.020e-28
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 RELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            +EL+ IKPTHVLNAAG+TGRPN+DWCE H+PET+R NVIGTLNLADLC  + IHCT+YATG
Sbjct:   49 KELDEIKPTHVLNAAGITGRPNIDWCEDHKPETMRTNVIGTLNLADLCYERNIHCTVYATG 109          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A7S1YXN3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXN3_TRICV)

HSP 1 Score: 113 bits (283), Expect = 1.060e-28
Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 0
Query:    2 ELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            EL+ +KPTHVLNAAG+TGRPN+DWCE H+PET+R NVIGTLNLADLC  + IHCTIYATG
Sbjct:   51 ELDAVKPTHVLNAAGITGRPNIDWCEDHKPETIRTNVIGTLNLADLCLERDIHCTIYATG 110          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A1E7F469_9STRA (Putative bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F469_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.260e-28
Identity = 46/60 (76.67%), Postives = 54/60 (90.00%), Query Frame = 0
Query:    2 ELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            EL+ IKPTHV NAAG+TGRPN+DWCE+H+PET+R NVIGTLNLADLC  + IHCT+YATG
Sbjct:   56 ELDEIKPTHVFNAAGITGRPNIDWCETHKPETIRTNVIGTLNLADLCLDRNIHCTVYATG 115          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A6A0A107_HAELA (RmlD_sub_bind domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A107_HAELA)

HSP 1 Score: 107 bits (266), Expect = 3.410e-28
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    2 ELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATGYTMHF 66
            E+E +KPTHVLNAAG+TGRPNVDWCE H+ ET+RANVIG LNLAD+C+ +GIH T Y TG   H+
Sbjct:   52 EIERVKPTHVLNAAGMTGRPNVDWCEDHKVETIRANVIGCLNLADVCTQQGIHMTYYGTGCIFHY 116          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A7S4AAM3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAM3_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.420e-28
Identity = 46/61 (75.41%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 RELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            +EL+ IKPTHVLNAAG+TGRPN+DWCE ++PET+R NVIGTLNLADLC  +GIHC +YATG
Sbjct:   53 KELDEIKPTHVLNAAGITGRPNIDWCEKNKPETIRTNVIGTLNLADLCMERGIHCCVYATG 113          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: K0TKT8_THAOC (RmlD_sub_bind domain-containing protein n=2 Tax=Thalassiosirales TaxID=33847 RepID=K0TKT8_THAOC)

HSP 1 Score: 111 bits (277), Expect = 5.270e-28
Identity = 44/61 (72.13%), Postives = 56/61 (91.80%), Query Frame = 0
Query:    1 RELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            +EL+++KP+HV  AAG+TGRPN+DWCE H+P+T+R NVIGTLNLADLC+ +GIHCTIYATG
Sbjct:   27 KELDSVKPSHVFMAAGITGRPNIDWCEDHKPDTIRTNVIGTLNLADLCNERGIHCTIYATG 87          
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Match: A0A7R9W800_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9W800_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.600e-27
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    2 ELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSSKGIHCTIYATG 61
            EL+  KP+HVLNAAG+TGRPN+DWCE H+PET+R NVIGTLNLADLC  K IHCTIYATG
Sbjct:   50 ELDAYKPSHVLNAAGITGRPNIDWCEDHKPETMRTNVIGTLNLADLCMLKDIHCTIYATG 109          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16771.4847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMH5_ECTSI1.930e-3495.08RmlD_sub_bind domain-containing protein n=2 Tax=Ec... [more]
A0A835Z517_9STRA1.060e-3081.97RmlD_sub_bind domain-containing protein n=1 Tax=Tr... [more]
A0A448YU74_9STRA7.940e-2973.77RmlD_sub_bind domain-containing protein n=1 Tax=Ps... [more]
A0A7R9WWB4_9STRA1.020e-2877.05Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A7S1YXN3_TRICV1.060e-2878.33Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1E7F469_9STRA3.260e-2876.67Putative bifunctional dTDP-4-dehydrorhamnose 3,5-e... [more]
A0A6A0A107_HAELA3.410e-2869.23RmlD_sub_bind domain-containing protein (Fragment)... [more]
A0A7S4AAM3_9STRA4.420e-2875.41Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
K0TKT8_THAOC5.270e-2872.13RmlD_sub_bind domain-containing protein n=2 Tax=Th... [more]
A0A7R9W800_9STRA1.600e-2778.33Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029903RmlD-like substrate binding domainPFAMPF04321RmlD_sub_bindcoord: 3..62
e-value: 1.9E-5
score: 23.9
NoneNo IPR availableGENE3D3.40.50.720coord: 1..76
e-value: 2.8E-15
score: 58.4
NoneNo IPR availablePANTHERPTHR43000FAMILY NOT NAMEDcoord: 2..69
NoneNo IPR availablePANTHERPTHR43000:SF22coord: 2..69
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 3..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16771contigEcto-sp13_S_contig16771:2753..3386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16771.4847.1mRNA_Ecto-sp13_S_contig16771.4847.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16771 2345..3386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16771.4847.1 ID=prot_Ecto-sp13_S_contig16771.4847.1|Name=mRNA_Ecto-sp13_S_contig16771.4847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
RELETIKPTHVLNAAGVTGRPNVDWCESHRPETVRANVIGTLNLADLCSS
KGIHCTIYATGYTMHFIHVSKNTSSRLVAKEANM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029903RmlD-like-bd
IPR036291NAD(P)-bd_dom_sf