prot_Ecto-sp13_S_contig1674.4829.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1674.4829.1
Unique Nameprot_Ecto-sp13_S_contig1674.4829.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1674.4829.1 vs. uniprot
Match: A0A6H5L7Q5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q5_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.590e-83
Identity = 131/146 (89.73%), Postives = 137/146 (93.84%), Query Frame = 0 
Query:    1 MVALQAKTSGLLKQQGVLLPQIVEECVATSRHLASSATKEGGRAAESPPGLPPAEEEGLRSLLMSSADPNNEVFCVFFKRVLLSLKGMVAGGDAADVCVRNGMQSFVDELRPVGARLHRLFAHNVKVFAGHYGPIVTEAAKAHVLS 146
            M ALQAKT+GLLKQQGVLLPQIVEECVATSR LASSA+KEGG AAESPPGLP  EEEGLRSLLM SADPNNEVF VFFKRVLLSLKGM+AGGDAADVCVRNGMQSFV+E+RPVGARLHRLFAHNVKVFAGHYG IVTEAAKA+ LS
Sbjct:   79 MAALQAKTTGLLKQQGVLLPQIVEECVATSRRLASSASKEGGGAAESPPGLPLVEEEGLRSLLMRSADPNNEVFRVFFKRVLLSLKGMIAGGDAADVCVRNGMQSFVEEMRPVGARLHRLFAHNVKVFAGHYGSIVTEAAKAYALS 224
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BLAST of mRNA_Ecto-sp13_S_contig1674.4829.1 vs. uniprot
Match: D8LIV9_ECTSI (Novel protein containing a T-complex protein 11 domain (Zgc:73347) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV9_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 4.250e-66
Identity = 121/146 (82.88%), Postives = 123/146 (84.25%), Query Frame = 0 
Query:    1 MVALQAKTSGLLKQQGVLLPQIVEECVATSRHLASSATKEGGRAAESPPGLPPAEEEGLRSLLMSSADPNNEVFCVFFKRVLLSLKGMVAGGDAADVCVRNGMQSFVDELRPVGARLHRLFAHNVKVFAGHYGPIVTEAAKAHVLS 146
            M ALQAKTSGLLKQQGVLLPQIVEECVATSR LA                 PPAEEEGLRSLLMSSADPNNEVF VFFKRVLLSLKGMVAGGDAADVCVRNGMQSF +ELRPVGARLHRLFAHNVKVFAGHYGPIVTEAAKA+  S
Sbjct:  767 MAALQAKTSGLLKQQGVLLPQIVEECVATSRRLAXXXXXXXXXXXXXXXXXPPAEEEGLRSLLMSSADPNNEVFRVFFKRVLLSLKGMVAGGDAADVCVRNGMQSFGEELRPVGARLHRLFAHNVKVFAGHYGPIVTEAAKAYAPS 912
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1674.4829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7Q5_9PHAE2.590e-8389.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIV9_ECTSI4.250e-6682.88Novel protein containing a T-complex protein 11 do... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008862T-complex 11PFAMPF05794Tcp11coord: 29..136
e-value: 6.8E-10
score: 38.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1674contigEcto-sp13_S_contig1674:5130..7930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1674.4829.1mRNA_Ecto-sp13_S_contig1674.4829.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1674 4128..7971 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1674.4829.1 ID=prot_Ecto-sp13_S_contig1674.4829.1|Name=mRNA_Ecto-sp13_S_contig1674.4829.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MVALQAKTSGLLKQQGVLLPQIVEECVATSRHLASSATKEGGRAAESPPG
LPPAEEEGLRSLLMSSADPNNEVFCVFFKRVLLSLKGMVAGGDAADVCVR
NGMQSFVDELRPVGARLHRLFAHNVKVFAGHYGPIVTEAAKAHVLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008862Tcp11