prot_Ecto-sp13_S_contig1674.4827.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1674.4827.1
Unique Nameprot_Ecto-sp13_S_contig1674.4827.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1674.4827.1 vs. uniprot
Match: D8LIW0_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIW0_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 9.960e-10
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 
Query:   56 DPHDEFLILATDGVWDVMDNPGIVSFLEIQ 85
            DP DEFLILATDGVWDVMDNPGIVSFL+IQ
Sbjct:   78 DPQDEFLILATDGVWDVMDNPGIVSFLQIQ 107
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1674.4827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIW0_ECTSI9.960e-1093.33PPM-type phosphatase domain-containing protein n=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036457PPM-type phosphatase domain superfamilyGENE3D3.60.40.10coord: 13..84
e-value: 2.5E-7
score: 31.9
IPR036457PPM-type phosphatase domain superfamilySUPERFAMILY81606PP2C-likecoord: 57..82
IPR001932PPM-type phosphatase domainPFAMPF00481PP2Ccoord: 56..81
e-value: 5.0E-6
score: 26.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1674contigEcto-sp13_S_contig1674:28..1015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1674.4827.1mRNA_Ecto-sp13_S_contig1674.4827.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1674 3..1015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1674.4827.1 ID=prot_Ecto-sp13_S_contig1674.4827.1|Name=mRNA_Ecto-sp13_S_contig1674.4827.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MRRTPATHAWFATPSRCRLPRAVHSETSTLSPTRPGCRRSRWSAQCRSCT
RGGGEDPHDEFLILATDGVWDVMDNPGIVSFLEIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf
IPR001932PPM-type_phosphatase_dom