prot_Ecto-sp13_S_contig1673.4821.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1673.4821.1
Unique Nameprot_Ecto-sp13_S_contig1673.4821.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length527
Homology
BLAST of mRNA_Ecto-sp13_S_contig1673.4821.1 vs. uniprot
Match: A0A6H5JU08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU08_9PHAE)

HSP 1 Score: 780 bits (2013), Expect = 8.370e-281
Identity = 439/494 (88.87%), Postives = 449/494 (90.89%), Query Frame = 0
Query:   34 MTADTVVGRRVSYGGGESGLLEAGSSGGYQHHLEVQPAATARKSKKNGGSKRAKXXXXXXXXXXXXXXXXNKVRANKGGGRKLLQASTDSALLPACASLFVPTGAGDELTGTYDFHGHYSDRRPVYAAANGNKFFAKDEEGVPTTWYVTQASPDSTFFLSLESAVFEPADLEDLQPWVRHNDPTCKSCISKLRMSCSALTVDXXXXXXXXXXXXXXXXXXXXXAENENSTMSTAETXXXXXXXXXXXXLS-DTTMADTSAVGGCANLKINNGEERAGVYSLSGVDGEGGVVFRNGRPSYAAVGANRTDVVFSTTMNVCASGYGVVDAEWADHVGYLPPTSTVNAVFLMYVAENVGVDTADDAAATIATAAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDVGCADAGEVEEASATAAGKGYGGEEEQGTASPSSNSTALVPVGSEPNARWLSTMFAL 526
            MTADTVVGRRV+YGGGESGLL AGSSGGY+HHLEVQPAATA +SKKNGGSKRAK  XXXXXXXXXXXXXX KVRANKGGGR+L QASTD ALLPACASLFVPTGAGDELTGTYDF GHYSDRRPVYAAANGNKFFAKDEEGVPTTWYVTQASP+STFFLSLESAVFEPADLEDLQPWVR+NDPTC+SCISKL MSCSALT D            XXXXXXXXXAENEN TMSTAET        XXXXL  DTTMADTSAVGGCANLKINNGE+RAGVYSLS VDGEGGVVFRNGRPSYAAVGANRTDVVFST MNVCASGYGVVDA+WA+HVGYLPPTSTVNAVFLMYVAENVGVDTADDAAA IATAAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDVGCA AGEVEEASA A   GYGGEEEQGTAS  SNSTALVPVG EPNARWLSTM AL
Sbjct:    1 MTADTVVGRRVNYGGGESGLLGAGSSGGYRHHLEVQPAATANQSKKNGGSKRAKKSXXXXXXXXXXXXXXXKVRANKGGGRRLQQASTDGALLPACASLFVPTGAGDELTGTYDFQGHYSDRRPVYAAANGNKFFAKDEEGVPTTWYVTQASPNSTFFLSLESAVFEPADLEDLQPWVRNNDPTCRSCISKLSMSCSALTADAIPTAPETTTPAXXXXXXXXXAENENLTMSTAETVVPPATTPXXXXLPPDTTMADTSAVGGCANLKINNGEDRAGVYSLSDVDGEGGVVFRNGRPSYAAVGANRTDVVFSTMMNVCASGYGVVDADWANHVGYLPPTSTVNAVFLMYVAENVGVDTADDAAAAIATAAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDVGCAAAGEVEEASAAAVATGYGGEEEQGTASLWSNSTALVPVGWEPNARWLSTMLAL 494          
BLAST of mRNA_Ecto-sp13_S_contig1673.4821.1 vs. uniprot
Match: D7G0N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N9_ECTSI)

HSP 1 Score: 736 bits (1900), Expect = 1.130e-263
Identity = 413/498 (82.93%), Postives = 424/498 (85.14%), Query Frame = 0
Query:   34 MTADTVVGRRVSYGGGESGLLEAGSSGGYQHHLEVQPAATARKSKKNGGSKRAKXXXXXXXXXXXXXXXXNKVRANKGGGRKLLQASTDSALLPACASLFVPTGAGDELTGTYDFHGHYSDRRPVYAAANGNKFFAKDEEGVPTTWYVTQASPDSTFFLSLESAVFEPADLED----LQPWVRHNDPTCKSCISKLRMSCSALTVDXXXXXXXXXXXXXXXXXXXXXAENENSTMSTAETXXXXXXXXXXXXL-SDTTMADTSAVGGCANLKINNGEERAGVYSLSGVDGEGGVVFRNGRPSYAAVGANRTDVVFSTTMNVCASGYGVVDAEWADHVGYLPPTSTVNAVFLMYVAENVGVDTADDAAATIATAAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDVGCADAGEVEEASATAAGKGYGGEEEQGTASPSSNSTALVPVGSEPNARWLSTMFAL 526
            MTADTVVGRR SY GGESGLLEAGSSGGYQH LEV PA+ ARK KKNGGSKRAK XXXXXXXXXXXXXXX KV ANKGGGR+LLQAS D ALLPAC+SLFVPTGAGDELTGTYDF GHYSDRRPVYAAANGNKFFAKDEEGVPTTWY+TQASP+S FFLSLESAVFEPADL+D    LQPWVR+NDPTC SCISKL MSCSA T D                 X   AENENSTMSTAET            L +DTTM DTSAVGGCANLKINNGE+RAGVYSLSGVDGEGGVVFRNGRPSYAAVGA+RTDVVFSTTMNVCASGYGVVDA+WA  V YLPPTSTVN VFLMYVAENVGVDTADDAAA       SSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWID GCADAGEVEEA A  A   YGGEEEQGTAS SSNSTALVPVGSEPNARWLSTMFAL
Sbjct:    1 MTADTVVGRRASYRGGESGLLEAGSSGGYQH-LEVHPASAARKGKKNGGSKRAKKXXXXXXXXXXXXXXXXKVEANKGGGRRLLQASADGALLPACSSLFVPTGAGDELTGTYDFQGHYSDRRPVYAAANGNKFFAKDEEGVPTTWYITQASPNSKFFLSLESAVFEPADLKDPEDMLQPWVRNNDPTCGSCISKLHMSCSAWTADVIAAAPVTTTPAPNDPVXSSPAENENSTMSTAETVVPPATTPAPTDLPTDTTMVDTSAVGGCANLKINNGEDRAGVYSLSGVDGEGGVVFRNGRPSYAAVGADRTDVVFSTTMNVCASGYGVVDADWAVGVEYLPPTSTVNTVFLMYVAENVGVDTADDAAA-------SSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDFGCADAGEVEEALAATADTRYGGEEEQGTASLSSNSTALVPVGSEPNARWLSTMFAL 490          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1673.4821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU08_9PHAE8.370e-28188.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0N9_ECTSI1.130e-26382.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..526
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1673contigEcto-sp13_S_contig1673:6704..8284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1673.4821.1mRNA_Ecto-sp13_S_contig1673.4821.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1673 6704..8284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1673.4821.1 ID=prot_Ecto-sp13_S_contig1673.4821.1|Name=mRNA_Ecto-sp13_S_contig1673.4821.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=527bp
MSNTAAVSLAALSVVLGLTTTPCSGGTSLRGSAMTADTVVGRRVSYGGGE
SGLLEAGSSGGYQHHLEVQPAATARKSKKNGGSKRAKKSKESKKAGRAKK
SKKNKVRANKGGGRKLLQASTDSALLPACASLFVPTGAGDELTGTYDFHG
HYSDRRPVYAAANGNKFFAKDEEGVPTTWYVTQASPDSTFFLSLESAVFE
PADLEDLQPWVRHNDPTCKSCISKLRMSCSALTVDAITAAPVTTTPAPND
PVPSSPAENENSTMSTAETVVPPATTPAPTDLSDTTMADTSAVGGCANLK
INNGEERAGVYSLSGVDGEGGVVFRNGRPSYAAVGANRTDVVFSTTMNVC
ASGYGVVDAEWADHVGYLPPTSTVNAVFLMYVAENVGVDTADDAAATIAT
AAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAK
FTPATSTTRPTLEENFWIDVGCADAGEVEEASATAAGKGYGGEEEQGTAS
PSSNSTALVPVGSEPNARWLSTMFAL*
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