prot_Ecto-sp13_S_contig1673.4820.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1673.4820.1
Unique Nameprot_Ecto-sp13_S_contig1673.4820.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: D7G0N8_ECTSI (DNA ligase (NAD(+)) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N8_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 4.060e-73
Identity = 155/240 (64.58%), Postives = 164/240 (68.33%), Query Frame = 0
Query:    1 MAEVIAEGFNGDFEAFWGALTSRASDASQALEAAQHTRDRETAAVANTAAERXXXXXXXXXXXXXXXXXXXXVDDTGPTEPAAAEAFRGVQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGG---MIGGGSGGDAVVEGGGMGSAGGG-AWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRIGLPP 236
            MAEVIAE FNG+FEAFWGALT         +                                         V+ TGPTEPAAAEAF+G+QGMGPAMLASLLRFAKA+NGNRPVVEALASEVRFSARAR RH GG   M+      DAVV            AWVEGKTVVFTGTLTRMKR ETQEAARELGARVTGSISRKTD+VVVGLNPGGKLEKARELGVEV+SEEEWYRRIGLPP
Sbjct:  976 MAEVIAEEFNGEFEAFWGALTRAGLPTPPKV-----------------------------------------VNGTGPTEPAAAEAFQGIQGMGPAMLASLLRFAKAENGNRPVVEALASEVRFSARARRRHAGGGEWMVAL----DAVVXXXXXXXXXXXXAWVEGKTVVFTGTLTRMKRTETQEAARELGARVTGSISRKTDMVVVGLNPGGKLEKARELGVEVVSEEEWYRRIGLPP 1170          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: A0A6H5K6N5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N5_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 2.380e-52
Identity = 103/135 (76.30%), Postives = 108/135 (80.00%), Query Frame = 0
Query:    1 MAEVIAEGFNGDFEAFWGALTSRASDASQALEAAQHTRDRETAAVANTAAERXXXXXXXXXXXXXXXXXXXXVDDTGPTEPAAAEAFRGVQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGG 135
            MAEVIAE FNGDFEAFWGALT RASDASQALEAAQ TRDRETAA+ANTAAER                    V+   PTEPAAAEAF+G+QGMGPAMLASLLRFAKA+NGNRPVVEALASEVRFSARAR RHRGG
Sbjct:    1 MAEVIAEEFNGDFEAFWGALT-RASDASQALEAAQRTRDRETAAIANTAAERQVPNHAAADAAVAAATVAA-VNGNDPTEPAAAEAFQGIQGMGPAMLASLLRFAKAENGNRPVVEALASEVRFSARARRRHRGG 133          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: A0A6H5JUK0_9PHAE (DNA ligase (NAD(+)) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK0_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 7.090e-48
Identity = 121/174 (69.54%), Postives = 125/174 (71.84%), Query Frame = 0
Query:    1 MAEVIAEGFNGDFEAFWGALTSRASDASQALEAAQHTRDRETAAVANTAAERXXXXXXXXXXXXXXXXXXXXVDDTGPTEPAAAEAFRGVQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGGMIGGGSGGDAVVEGGGMGSAGGGAWVEGKTVVFTGTLTR 174
            MAEVIAE FNGDFEAFWGALT RASDASQALEAAQHTRDRETAAVANTAAER       XXXXX        V+  GPTEPAAAEAF+G+QGMGPAMLASLLRFAKA+NGNRPVVEALAS VRFSARAR                             AWVEGKTVVFTGTLTR
Sbjct: 1053 MAEVIAEEFNGDFEAFWGALT-RASDASQALEAAQHTRDRETAAVANTAAERQETNAAAXXXXXVAAATFAAVNGNGPTEPAAAEAFQGIQGMGPAMLASLLRFAKAENGNRPVVEALASGVRFSARARRXXXXXXXXXXXXXXXXXXX--XXXXXXXAWVEGKTVVFTGTLTR 1223          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: A0A3E0KIA8_9FIRM (DNA ligase (NAD(+)) LigA (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3E0KIA8_9FIRM)

HSP 1 Score: 94.7 bits (234), Expect = 6.790e-21
Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 0
Query:   82 AAAEAFRGVQGMGPAMLASLLRFAKADNGNRPVVEAL-ASEVRFSARARGRHRGGMIGGGSGGDAVVEGGGMGSAGGGAWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRI 232
            AA EA   V  +G  + AS+L +  A   NR +VE L A+ V+ +A AR    GG            EGG  G+  GG  + GK  V TGTL+R +R E +E  R  G  VTGS+SR TD +VVG NPG KL++ARELGV V+SEEE+ R +
Sbjct:    3 AACEALTAVPAVGEKIAASVLAYF-AQPQNRALVERLRAAGVKMTALARAAAAGG------------EGGAQGAGPGGTALAGKRFVVTGTLSRPRR-EIEELIRSRGGVVTGSVSRSTDFLVVGENPGSKLDRARELGVPVLSEEEFERML 140          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: A0A2H6ASG5_9BACT (DNA ligase n=1 Tax=bacterium HR39 TaxID=2035434 RepID=A0A2H6ASG5_9BACT)

HSP 1 Score: 100 bits (249), Expect = 1.470e-20
Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 0
Query:   89 GVQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGGMIGGGSGGDAVVEGGGMGSAGGGAWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRIGL 234
            G++G+GP ++ SL  F  A+  N  +++ LA+++      R                         A  G+ + G+T+VFTG L RM R E +E A  LGA+VT S+SR+TD VV G NPG KL++AR+LGV V++E+EWYR +GL
Sbjct:  599 GIEGIGPVIVESLREFL-AEPRNVELIDRLAAKLEILPVER----------------------PAGAAAGSPLAGRTIVFTGELERMTREEAKELAERLGAKVTDSVSRRTDFVVAGRNPGSKLQRARQLGVRVVTEDEWYRMVGL 721          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: A0A7V2T8J1_9PROT (DNA ligase (NAD(+)) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2T8J1_9PROT)

HSP 1 Score: 97.8 bits (242), Expect = 5.350e-20
Identity = 62/145 (42.76%), Postives = 81/145 (55.86%), Query Frame = 0
Query:   90 VQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGGMIGGGSGGDAVVEGGGMGSAGGGAWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRIGL 234
            V+G+GP +  +L  F +    NR +V+ LA EV                        VE      A   + + GKTVVFTG L+RM R E ++ A  LGARV+GS+SR+TD VV G NPG KL +ARELGV ++SEEEWY   G+
Sbjct:  290 VEGIGPTIAEALAEFFREPR-NRQLVDELAREVEIQP--------------------VEA----PATAASPLTGKTVVFTGELSRMTRSEAKQRAEALGARVSGSVSRRTDFVVAGANPGSKLARARELGVRILSEEEWYDIAGV 409          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: UPI000FAFDC18 (NAD-dependent DNA ligase LigA n=1 Tax=Salmonella enteritidis TaxID=149539 RepID=UPI000FAFDC18)

HSP 1 Score: 90.9 bits (224), Expect = 8.530e-20
Identity = 42/73 (57.53%), Postives = 58/73 (79.45%), Query Frame = 0
Query:  161 VEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRIG 233
            V GKTVVFTG+L RM R E +  A +LGA+V+GS+S+KTDLVV G   G KL++A +LG+EV+SE++W+ R+G
Sbjct:   37 VAGKTVVFTGSLERMSRDEAKAMAEKLGAKVSGSVSKKTDLVVAGPGAGSKLKQATDLGIEVISEDDWFARVG 109          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: A0A7C5WF64_9PROT (NAD-dependent DNA ligase LigA n=1 Tax=Thermopetrobacter sp. TaxID=2268141 RepID=A0A7C5WF64_9PROT)

HSP 1 Score: 94.0 bits (232), Expect = 1.610e-19
Identity = 63/156 (40.38%), Postives = 83/156 (53.21%), Query Frame = 0
Query:   80 EPAAAEAFRGVQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGGMIGGGSGGDAVVEGGGMGSAGGGAWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRIGLP 235
            E AAA     + G+GP ++A+L  F  A+  NR V++AL  EV      +                             + V GKT+VFTG L +M R E +  A  LGA+V+GS+S+KTDLVV G   G KL+KARELGVEV+SE +W   IG P
Sbjct:  119 ESAAAGELEALDGIGPVVVAALHDFF-AEGHNRQVIDALLEEVTPEPLQQ-------------------------LAADSPVAGKTIVFTGKLEQMTRDEAKALAERLGAKVSGSVSKKTDLVVAGPGAGSKLKKARELGVEVISEAQWLALIGSP 248          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: A0A2H6B141_9BACT (DNA ligase n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6B141_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 4.200e-19
Identity = 61/153 (39.87%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   83 AAEAFRGVQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGGMIGGGSGGDAVVEGGGMGSAGGGAWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRIGLP 235
            A E  + ++G+GP +  SL  F  A+  NR +V+ALA+EV     A  +                         G + + GKTVVFTG L  M R E +  A  LGA+V  S+SR+TD VVVG  PG K  KA ELGV ++SE+EWY+  G P
Sbjct:  589 AREEIQDIEGVGPVIAESLAEFF-AEPRNRSLVDALAAEVEIEPVAAPQ-----------------------VAGPSPLAGKTVVFTGELAHMSREEAKAVAESLGAKVADSVSRRTDFVVVGERPGSKYRKAVELGVRILSEDEWYQLAGRP 717          
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Match: UPI0013D050A5 (NAD-dependent DNA ligase LigA n=2 Tax=Chelativorans TaxID=449972 RepID=UPI0013D050A5)

HSP 1 Score: 93.6 bits (231), Expect = 3.520e-18
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 0
Query:   82 AAAEAFRGVQGMGPAMLASLLRFAKADNGNRPVVEALASEVRFSARARGRHRGGMIGGGSGGDAVVEGGGMGSAGGGAWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTDLVVVGLNPGGKLEKARELGVEVMSEEEWYRRIG 233
            AA E    ++ +G A++ ++  +  A+  NR VVEALA++V      R                V++          + V GKT+VFTG L RM R E ++ A  LGA+V GS+S+KTDLVV G   G KL+KA ELGVEV+ E+ W+ R+G
Sbjct:  574 AAREEMDALEDIGDAVIDAVSNYF-AEEHNRAVVEALAAQVDVEDAER---------------PVMD----------SPVAGKTIVFTGALERMSRDEAKDMAERLGAKVAGSVSKKTDLVVAGPGAGSKLKKAAELGVEVIDEDAWFARVG 699          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1673.4820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N8_ECTSI4.060e-7364.58DNA ligase (NAD(+)) n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5K6N5_9PHAE2.380e-5276.30Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JUK0_9PHAE7.090e-4869.54DNA ligase (NAD(+)) n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A3E0KIA8_9FIRM6.790e-2145.39DNA ligase (NAD(+)) LigA (Fragment) n=1 Tax=Firmic... [more]
A0A2H6ASG5_9BACT1.470e-2039.73DNA ligase n=1 Tax=bacterium HR39 TaxID=2035434 Re... [more]
A0A7V2T8J1_9PROT5.350e-2042.76DNA ligase (NAD(+)) n=1 Tax=Rhodospirillales bacte... [more]
UPI000FAFDC188.530e-2057.53NAD-dependent DNA ligase LigA n=1 Tax=Salmonella e... [more]
A0A7C5WF64_9PROT1.610e-1940.38NAD-dependent DNA ligase LigA n=1 Tax=Thermopetrob... [more]
A0A2H6B141_9BACT4.200e-1939.87DNA ligase n=1 Tax=bacterium HR40 TaxID=2035435 Re... [more]
UPI0013D050A53.520e-1839.47NAD-dependent DNA ligase LigA n=2 Tax=Chelativoran... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 158..235
e-value: 2.8E-8
score: 43.5
IPR001357BRCT domainPFAMPF00533BRCTcoord: 162..229
e-value: 7.6E-11
score: 42.2
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 161..229
score: 12.394
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 154..233
e-value: 2.2E-24
score: 87.5
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 161..231
NoneNo IPR availablePANTHERPTHR23389:SF9DNA LIGASE-RELATEDcoord: 66..231
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 66..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1673contigEcto-sp13_S_contig1673:2769..4949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1673.4820.1mRNA_Ecto-sp13_S_contig1673.4820.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1673 554..5659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1673.4820.1 ID=prot_Ecto-sp13_S_contig1673.4820.1|Name=mRNA_Ecto-sp13_S_contig1673.4820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MAEVIAEGFNGDFEAFWGALTSRASDASQALEAAQHTRDRETAAVANTAA
ERQEETSAAAADAPAAAATAAAVDDTGPTEPAAAEAFRGVQGMGPAMLAS
LLRFAKADNGNRPVVEALASEVRFSARARGRHRGGMIGGGSGGDAVVEGG
GMGSAGGGAWVEGKTVVFTGTLTRMKRMETQEAARELGARVTGSISRKTD
LVVVGLNPGGKLEKARELGVEVMSEEEWYRRIGLPPGSGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf