prot_Ecto-sp13_S_contig16724.4817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16724.4817.1
Unique Nameprot_Ecto-sp13_S_contig16724.4817.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16724.4817.1 vs. uniprot
Match: D7FV49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV49_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.770e-58
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0 
Query:    1 PLRDRLASILSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRRAEVLPPSHFSKVHTVVDVSETDATLGASFSKALFRLKGFSCEMAVEVLSAAEAFAAVD 108
            PLRDRLAS+LSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRRAEVLPPSHFSKVHTVVDVSETDATLGASFSKALFRL+GFSCEMAVEVLSAAEAFAA D
Sbjct: 1624 PLRDRLASMLSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRRAEVLPPSHFSKVHTVVDVSETDATLGASFSKALFRLEGFSCEMAVEVLSAAEAFAAAD 1731
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BLAST of mRNA_Ecto-sp13_S_contig16724.4817.1 vs. uniprot
Match: A0A6H5JD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD11_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 7.720e-30
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0 
Query:    1 PLRDRLASILSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRRAEVLPPSHFSK 61
            PLRDRLAS+LSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRRAEVLPPSHFSK
Sbjct: 2196 PLRDRLASMLSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRRAEVLPPSHFSK 2256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16724.4817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV49_ECTSI2.770e-5897.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD11_9PHAE7.720e-3098.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16724contigEcto-sp13_S_contig16724:1035..2722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16724.4817.1mRNA_Ecto-sp13_S_contig16724.4817.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16724 1035..2722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16724.4817.1 ID=prot_Ecto-sp13_S_contig16724.4817.1|Name=mRNA_Ecto-sp13_S_contig16724.4817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
PLRDRLASILSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPSYAEAKRR
AEVLPPSHFSKVHTVVDVSETDATLGASFSKALFRLKGFSCEMAVEVLSA
AEAFAAVD
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