prot_Ecto-sp13_S_contig16721.4814.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16721.4814.1
Unique Nameprot_Ecto-sp13_S_contig16721.4814.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: D7FJW7_ECTSI (ENDO3c domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW7_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 8.420e-39
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0
Query:    1 MAEVAQDDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLNVFDSWDEDDK 74
            MAEV QDDLAD+LRHVHWNKAKAKHIRESA IIVRRH GVVPRRRAELLALPGVGPALVEILLNVFDSWD+DDK
Sbjct:  143 MAEVGQDDLADVLRHVHWNKAKAKHIRESASIIVRRHRGVVPRRRAELLALPGVGPALVEILLNVFDSWDKDDK 216          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A6H5L0N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N6_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 7.630e-36
Identity = 84/149 (56.38%), Postives = 86/149 (57.72%), Query Frame = 0
Query:    1 MAEVAQDDLADILRHVHWNK---------------------------------------AKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLNVFDSWDEDDKASVAAAEASSPEARAVVGG---GNRDGDVDGVEGDG 107
            MAEVAQDDLAD+LRHVHWNK                                       AKAKHIRESAGIIVRRH GVVPRRRAELLALPGVGPALVEILLNVFDSWDEDDK                      G+R GDVDGVEGDG
Sbjct:   52 MAEVAQDDLADVLRHVHWNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAKHIRESAGIIVRRHRGVVPRRRAELLALPGVGPALVEILLNVFDSWDEDDKXXXXXXXXXXXXXXXXXXXXXXGDRGGDVDGVEGDG 200          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A0N0VE94_9TRYP (Putative Endonuclease III n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0N0VE94_9TRYP)

HSP 1 Score: 57.0 bits (136), Expect = 7.460e-7
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    4 VAQDDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLNVFDS 68
            + ++ L + ++ V+    KAKHI ++AGII+R + G VPR+  EL+ALPGVGP +  +  +V D+
Sbjct:   36 MGEEKLRERIKTVNLCNNKAKHIAQTAGIILRDYDGKVPRKYEELIALPGVGPKMANLFFSVADN 100          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A1H3YH08_9BURK (Endonuclease III n=5 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H3YH08_9BURK)

HSP 1 Score: 55.5 bits (132), Expect = 3.360e-6
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    1 MAEVAQDDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLNV 65
            + ++  + L D ++ +   ++KAKH+ E+A ++V +H G VPR RAEL ALPGVG     ++LNV
Sbjct:   64 IVQLGVEGLEDYIKTIGLYRSKAKHLVEAARMLVEQHGGEVPRTRAELEALPGVGRKTANVVLNV 128          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A7C6X6L7_9CLOT (Endonuclease III n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7C6X6L7_9CLOT)

HSP 1 Score: 55.1 bits (131), Expect = 5.620e-6
Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    1 MAEVAQDDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILL 63
            +A+  Q ++ DI+R     + KA+ +RE+AGI++ RH G VPR R EL+ LPGVG  +  +++
Sbjct:   77 LADADQGEVEDIVRSCGLYRTKARALRETAGILLGRHGGQVPRSREELMELPGVGRKVANLIM 139          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A521W4V2_9GAMM (Endonuclease III n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521W4V2_9GAMM)

HSP 1 Score: 55.1 bits (131), Expect = 6.380e-6
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    1 MAEVAQDDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLNV 65
            M E+ +  LA+ +R +   +AKA+H+   + +++ RH G VPR RA L ALPGVG     ILLNV
Sbjct:  101 MVELGEAGLAEYIRTIGLWRAKARHVVAMSRLLLERHGGEVPRERAALEALPGVGRKSANILLNV 165          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: C5CKP3_VARPS (Endonuclease III n=17 Tax=Variovorax TaxID=34072 RepID=C5CKP3_VARPS)

HSP 1 Score: 54.7 bits (130), Expect = 6.570e-6
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    7 DDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLNV 65
            + L D ++ +   ++KAKH+ E+  I+V +H G VPR RAEL ALPGVG     ++LNV
Sbjct:   70 EGLEDYIKTIGLYRSKAKHLIETCRILVEKHGGEVPRTRAELEALPGVGRKTANVVLNV 128          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A430JQA2_9ACTO (Adenine DNA glycosylase n=1 Tax=Actinobaculum sp. 352 TaxID=2490946 RepID=A0A430JQA2_9ACTO)

HSP 1 Score: 55.1 bits (131), Expect = 8.260e-6
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    4 VAQDDLADILRHVHWNKA----KAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILL 63
            +A    AD+L  V W +     +A  +RE A ++V RHHGV+P RR ELLALPG+GP   + L+
Sbjct:   67 LATSSPADVL--VAWGRLGYPRRALRLRECAAVVVERHHGVLPARREELLALPGIGPYTADALI 128          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A6M4A1G5_9BURK (Endonuclease III n=1 Tax=Undibacterium piscinae TaxID=2495591 RepID=A0A6M4A1G5_9BURK)

HSP 1 Score: 54.3 bits (129), Expect = 9.050e-6
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    7 DDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLN 64
            D L   ++ +   + KAKHI E+  I++  HH VVPR RAEL ALPGVG     ++LN
Sbjct:   70 DGLIPFIQTIGLFRTKAKHIIETCRILISEHHSVVPRTRAELEALPGVGRKTANVVLN 127          
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Match: A0A2W4RFM9_9PROT (Endonuclease III n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RFM9_9PROT)

HSP 1 Score: 53.5 bits (127), Expect = 1.660e-5
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    7 DDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLALPGVGPALVEILLNV 65
            + L+  +RH+    AKAK+I E+  +++ RH G VPR RA L ALPGVG     ++LNV
Sbjct:   70 EGLSPYIRHIGLYNAKAKNIIETCRLLIERHGGEVPRDRAALEALPGVGRKTANVVLNV 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16721.4814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FJW7_ECTSI8.420e-3993.24ENDO3c domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L0N6_9PHAE7.630e-3656.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0N0VE94_9TRYP7.460e-741.54Putative Endonuclease III n=1 Tax=Leptomonas pyrrh... [more]
A0A1H3YH08_9BURK3.360e-641.54Endonuclease III n=5 Tax=unclassified Variovorax T... [more]
A0A7C6X6L7_9CLOT5.620e-641.27Endonuclease III n=1 Tax=Clostridiaceae bacterium ... [more]
A0A521W4V2_9GAMM6.380e-644.62Endonuclease III n=1 Tax=Gammaproteobacteria bacte... [more]
C5CKP3_VARPS6.570e-645.76Endonuclease III n=17 Tax=Variovorax TaxID=34072 R... [more]
A0A430JQA2_9ACTO8.260e-645.31Adenine DNA glycosylase n=1 Tax=Actinobaculum sp. ... [more]
A0A6M4A1G5_9BURK9.050e-646.55Endonuclease III n=1 Tax=Undibacterium piscinae Ta... [more]
A0A2W4RFM9_9PROT1.660e-545.76Endonuclease III n=1 Tax=Proteobacteria bacterium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.30coord: 1..64
e-value: 4.8E-11
score: 44.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..66
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
IPR000445Helix-hairpin-helix motifPFAMPF00633HHHcoord: 36..60
e-value: 1.3E-5
score: 24.8
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16721contigEcto-sp13_S_contig16721:2593..3715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16721.4814.1mRNA_Ecto-sp13_S_contig16721.4814.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16721 2327..3772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16721.4814.1 ID=prot_Ecto-sp13_S_contig16721.4814.1|Name=mRNA_Ecto-sp13_S_contig16721.4814.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
MAEVAQDDLADILRHVHWNKAKAKHIRESAGIIVRRHHGVVPRRRAELLA
LPGVGPALVEILLNVFDSWDEDDKASVAAAEASSPEARAVVGGGNRDGDV
DGVEGDGGDGSGGGDGAAVTVAAVVTAVVAAVTVAGLVSAAKVRTMTTKR
AAREEDCQELGACRQRARASLWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000445HhH_motif
IPR011257DNA_glycosylase