prot_Ecto-sp13_S_contig16716.4812.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16716.4812.1
Unique Nameprot_Ecto-sp13_S_contig16716.4812.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length367
Homology
BLAST of mRNA_Ecto-sp13_S_contig16716.4812.1 vs. uniprot
Match: D8LDN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN9_ECTSI)

HSP 1 Score: 617 bits (1592), Expect = 4.860e-219
Identity = 301/366 (82.24%), Postives = 319/366 (87.16%), Query Frame = 0
Query:    1 MPAVEETSYDYSWNAWKNNNTINGYPGYFEAPLTDCWGRTQYDLCVNTNAALIIPGVIVVFFSLMCMHCLGFCAPSTRAGLLRELAIEQPQSSRLVKAACVKVRATCKKTVKRTGKGGAKIIYTYEGTFVTRDGAVFNLPPPTRLPMGPKPSRRIEKRMLRVLHNTKRNPRADPSVARRCETPDGLRAEFSNMVKAVPKKPEASTSGEAFYRSHALGHPNVPFHRDAAADQRFDCILLVGTEQPGRTTRKVLLVGILGEDRITCVDDELMGASVEDLCCPSFCFVLGAAVLFIMCITLLTNKAAQNMAAWTFEGDYRVGAVIGLVLCTCVPLSLFVWKCRKSGKLLRSIRECPLVAESDRVIVGRT 366
            M  V E SYDYSW AW +NNTI+GYPGYFEAPLTDCWGR+QYDLCVNTNAA IIPGVIV F SL CM   GFCAPS RAGLLRELAIEQPQSSRLVK AC +V   C KTVK TGKGG KI YTY GTFVTRDGAVFNLPPPTR P   + SRRIEKRML VLHNTKRNPRADPS+ARRCETPDGLRAEFS MV+AVP+KPEAS SG +FYRSH LGHPNVP  RDAA D RFDCILLVGTE+PGRT  KVLLVGILGEDRITCV ++++GASV D CC SFCFVL AA+LFIMCITLLTN+AAQNMAAWTFEGD+RVGA+IGLVLCTCVPLSLFVWKCRKSGKLLRSIRECPLVAESDRVI  RT
Sbjct:  159 MSTVAEPSYDYSWGAWNSNNTISGYPGYFEAPLTDCWGRSQYDLCVNTNAAFIIPGVIVAFISLCCMWASGFCAPSARAGLLRELAIEQPQSSRLVKVACAEV--ACTKTVKSTGKGGTKITYTYNGTFVTRDGAVFNLPPPTRRPKMHEASRRIEKRMLSVLHNTKRNPRADPSLARRCETPDGLRAEFSKMVRAVPRKPEASRSGGSFYRSHVLGHPNVPVERDAAVDHRFDCILLVGTEEPGRTPTKVLLVGILGEDRITCVGEDVLGASVADFCCASFCFVLAAALLFIMCITLLTNEAAQNMAAWTFEGDHRVGAIIGLVLCTCVPLSLFVWKCRKSGKLLRSIRECPLVAESDRVINSRT 522          
BLAST of mRNA_Ecto-sp13_S_contig16716.4812.1 vs. uniprot
Match: A0A6H5KRC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC3_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 3.780e-95
Identity = 167/366 (45.63%), Postives = 208/366 (56.83%), Query Frame = 0
Query:    1 MPAVEETSYDYSWNAWKNNNTINGYPGYFEAPLTDCWGRTQYDLCVNTNAALIIPGVIVVFFSLMCMHCLGFCAPSTRAGLLRELAIEQPQSSRLVKAACVKVRATCKKTVKRTGKGGAKIIYTYEGTFVTRDGAVFNLPPPTRLPMGPKPSRRIEKRMLRVLHNTKRNPRADPSVARRCETPDGLRAEFSNMVKAVPKKPEASTSGEAFYRSHALGHPNVPFHRDAAADQRFDCILLVGTEQPGRTTRKVLLVGILGEDRITCVDDELMGASVEDLCCPSFCFVLGAAVLFIMCITLLTNKAAQNMAAWTFEGDYRVGAVIGLVLCTCVPLSLFVWKCRKSGKLLRSIRECPLVAESDRVIVGRT 366
            M AVE TS + +W AW+   T+ GYPGYFEAP+ DCW R +YDLCVN +  LI+PG+ V F+S++CM+                                      C+K  +++GKGG K  YTY+GTF   DGA+F LPPPTRL   P+ S +IEKRMLRVL+NT  NPRADP VA R                       A  S +   R   + +P VP   DA                      +VLLVGILGEDRITC+D EL+G+S     C SFC VL A +L  MC+ LLTN+AAQ+MA WTFEGDYR+GAV+GL+L +CVPLS F W  R S KL R +++CP VAESDRV+  RT
Sbjct:  133 MSAVESTSQNNTWGAWQYKGTVKGYPGYFEAPINDCWSRMKYDLCVNPSMGLIVPGMFVAFWSILCMY----------------------------------FPVGCQKLAQKSGKGGIKYFYTYKGTFAACDGALFVLPPPTRLSNAPRSSHKIEKRMLRVLYNTNLNPRADPGVASR-----------------------AGDSCDK--RKRQISNPIVP--HDA----------------------RVLLVGILGEDRITCIDHELLGSSSCCRSCASFCLVLAAVMLVTMCVALLTNEAAQHMAEWTFEGDYRIGAVVGLMLRSCVPLS-FAWNYRNSNKLFRLVKDCP-VAESDRVVHSRT 413          
BLAST of mRNA_Ecto-sp13_S_contig16716.4812.1 vs. uniprot
Match: A0A6H5K6X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X7_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.300e-21
Identity = 59/112 (52.68%), Postives = 61/112 (54.46%), Query Frame = 0
Query:    1 MPAVEETSYDYSWNAWKNNNTINGYPGYFEAPLTDCWGRTQYDLCVNTNAALIIPGVIVVFFSLMCMHCLGFCAPSTRAGLLRELA--------IEQPQSSRLVKAACVKVR 104
            MP VEETSYDYSW  W+N+NTING                                       LMCMHCLGFCA STRAGLLRELA        IEQPQSSRLVKAACVKVR
Sbjct:  118 MPTVEETSYDYSWTTWQNSNTING---------------------------------------LMCMHCLGFCARSTRAGLLRELAVEQQQSSPIEQPQSSRLVKAACVKVR 190          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16716.4812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDN9_ECTSI4.860e-21982.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRC3_9PHAE3.780e-9545.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6X7_9PHAE5.300e-2152.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 338..366
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 300..318
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 277..299
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..337
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..276
NoneNo IPR availableTMHMMTMhelixcoord: 278..300
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 315..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16716contigEcto-sp13_S_contig16716:770..2916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16716.4812.1mRNA_Ecto-sp13_S_contig16716.4812.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16716 646..3231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16716.4812.1 ID=prot_Ecto-sp13_S_contig16716.4812.1|Name=mRNA_Ecto-sp13_S_contig16716.4812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
MPAVEETSYDYSWNAWKNNNTINGYPGYFEAPLTDCWGRTQYDLCVNTNA
ALIIPGVIVVFFSLMCMHCLGFCAPSTRAGLLRELAIEQPQSSRLVKAAC
VKVRATCKKTVKRTGKGGAKIIYTYEGTFVTRDGAVFNLPPPTRLPMGPK
PSRRIEKRMLRVLHNTKRNPRADPSVARRCETPDGLRAEFSNMVKAVPKK
PEASTSGEAFYRSHALGHPNVPFHRDAAADQRFDCILLVGTEQPGRTTRK
VLLVGILGEDRITCVDDELMGASVEDLCCPSFCFVLGAAVLFIMCITLLT
NKAAQNMAAWTFEGDYRVGAVIGLVLCTCVPLSLFVWKCRKSGKLLRSIR
ECPLVAESDRVIVGRT*
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