mRNA_Ecto-sp13_S_contig1670.4804.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: D8LKN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKN8_ECTSI) HSP 1 Score: 320 bits (819), Expect = 6.260e-104 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 3
Query: 81 IMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLTNDG 548
IMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLTNDG
Sbjct: 11 IMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLTNDG 166
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: D8LMU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU1_ECTSI) HSP 1 Score: 267 bits (683), Expect = 1.200e-82 Identity = 123/158 (77.85%), Postives = 144/158 (91.14%), Query Frame = 3
Query: 69 QPQSIMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLTN 542
Q SI TG WAQRT+TVTAPSRGCHLITSEI +Q+PELR F+VGMAN+FLKHTSAS+T+NENADPDVRTDME+ALN+IVPVKWH MF H LEGPDDMTGHVKS++VGAS++IPV+NG LALGTWQGVYLCEHRD+GG+GGG AR+IV+T+QG+T+
Sbjct: 69 QQDSIKTGTAGWAQRTITVTAPSRGCHLITSEISKQVPELRSFRVGMANIFLKHTSASLTINENADPDVRTDMESALNQIVPVKWHNTMFRHTLEGPDDMTGHVKSTIVGASLNIPVSNGGLALGTWQGVYLCEHRDTGGWGGGFARDIVITIQGITS 226
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: A0A835YU00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU00_9STRA) HSP 1 Score: 259 bits (661), Expect = 3.180e-80 Identity = 113/154 (73.38%), Postives = 137/154 (88.96%), Query Frame = 3
Query: 81 IMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLTN 542
I TG W Q+T+T+TAPSRGCH+IT++I RQ+PEL+ F VG+A++F+KHTSAS+T+NENADPDVR DMEAALN IVP KWHRE FTH +EGPDDMTGHVKSSL+GAS+ +P+TNG+ ALGTWQG+YLCEHRDSGG+GGGHAR+I VT+QGL N
Sbjct: 16 IKTGTAGWLQKTITITAPSRGCHIITNDITRQIPELQRFSVGVAHIFIKHTSASLTINENADPDVRVDMEAALNHIVPEKWHREFFTHTMEGPDDMTGHVKSSLLGASVSVPITNGRFALGTWQGIYLCEHRDSGGWGGGHARSITVTIQGLVN 169
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: A0A7S2XZV0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV0_9STRA) HSP 1 Score: 233 bits (594), Expect = 7.190e-70 Identity = 104/158 (65.82%), Postives = 131/158 (82.91%), Query Frame = 3
Query: 69 QPQSIMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLTN 542
Q I++G SW Q+T+++TAPSRGCHLIT E+V Q+PELR F+VG A++F+KHTSAS+TLNENADPDV+ D+E ALN IVP W+R+MF H EG DDM GHVKS+LVGA+I IP++NG LGTWQG+YLCEHR+ GGFGGGH R IV+T+QG+T+
Sbjct: 41 QEGQIISGTTSWMQKTISITAPSRGCHLITREVVSQLPELRRFQVGTAHLFIKHTSASLTLNENADPDVQADLEKALNRIVPESWNRDMFVHTAEGDDDMPGHVKSALVGAAISIPISNGAFNLGTWQGIYLCEHRNQGGFGGGHNRKIVITLQGITS 198
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: A0A024TUF5_9STRA (Secondary thiamine-phosphate synthase enzyme n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TUF5_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.880e-65 Identity = 98/154 (63.64%), Postives = 124/154 (80.52%), Query Frame = 3
Query: 78 SIMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLT 539
SI TG +W Q+ + +TAPSRG HL+T E+ +Q+PE+R F VGMA +F+KHTSAS++LNEN DPDVRTDME A+N IVP W+R++F H +EG DDM HVKS+L+GASI +P+TNG+ LGTWQG+YLCEHRD GG+G GH R IVVT+ GLT
Sbjct: 2 SIKTGASAWFQKEIVLTAPSRGFHLVTDEVYKQVPEIRSFTVGMATLFVKHTSASLSLNENCDPDVRTDMEGAINRIVPESWNRDLFCHTMEGDDDMPAHVKSTLIGASIQVPLTNGRFNLGTWQGIYLCEHRDVGGWGHGHNRKIVVTLTGLT 155
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: F0W2W7_9STRA (Uncharacterized protein AlNc14C11G1345 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2W7_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.510e-64 Identity = 94/144 (65.28%), Postives = 121/144 (84.03%), Query Frame = 3
Query: 102 WAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQG 533
W Q+ + +TAPSRG HL+TSEI RQ+PEL+E K+G+ N+F+KHTSAS+++NEN DPDVR DME A N IVP W+R+MF H +EG DDM HVKS+++GASI++P+TNGK +GTWQG+YLCEHR++GGFGGGH R IVVT+QG
Sbjct: 2 WFQKEIRLTAPSRGFHLVTSEIERQLPELQEVKIGLCNLFIKHTSASLSINENCDPDVRDDMEKAFNRIVPESWNRDMFKHTMEGDDDMPAHVKSTVIGASINVPITNGKFNVGTWQGIYLCEHRNAGGFGGGHERKIVVTIQG 145
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: A0A067CHU1_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHU1_SAPPC) HSP 1 Score: 213 bits (543), Expect = 6.440e-63 Identity = 94/152 (61.84%), Postives = 119/152 (78.29%), Query Frame = 3
Query: 81 IMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGL 536
+ TG +W Q+ +T+ APSRG HL+T E+ +Q+PE+R F VG A +F+KHTSAS++LNEN DPDVR DME A+N IVP W+RE F H +EG DDM H+KS+L+GASI +PV+NGK LGTWQG+YLCEHRD GG+G GH R IVVT+ GL
Sbjct: 4 LRTGASAWFQKEITLKAPSRGFHLVTDEVYKQIPEIRHFSVGTATLFVKHTSASLSLNENCDPDVRIDMEGAMNRIVPESWNREFFRHTMEGDDDMPAHIKSTLIGASITVPVSNGKFNLGTWQGIYLCEHRDVGGWGNGHNRKIVVTINGL 155
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: A0A8K1CHI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHI4_PYTOL) HSP 1 Score: 213 bits (542), Expect = 6.950e-63 Identity = 95/147 (64.63%), Postives = 119/147 (80.95%), Query Frame = 3
Query: 99 SWAQRTVTVTAPSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHREMFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQGLT 539
+W Q+ + +TAP RG HL+T EI +Q+PELR+ KVGMAN+F+KHTSAS++LNEN D DVRTDME A N IVP W+RE F H EG DDM H+KS+L+GAS++IP+TNGK LGTWQG+YLCEHR+SGG+G GH R IV+T+QG T
Sbjct: 3 TWFQKEIRLTAPGRGFHLVTHEIEKQLPELRQVKVGMANLFIKHTSASLSLNENCDSDVRTDMEGAFNRIVPESWNREFFKHTDEGDDDMPAHIKSTLIGASLNIPITNGKFNLGTWQGIYLCEHRNSGGWGNGHDRKIVITIQGST 149
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: A0A1Z5JU85_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU85_FISSO) HSP 1 Score: 210 bits (534), Expect = 6.700e-61 Identity = 96/151 (63.58%), Postives = 124/151 (82.12%), Query Frame = 3
Query: 87 TGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPE-LREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHRE-MFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQG 533
T KP W Q +TVTAP RGCHLIT++I + E +R+ ++G+ N+F++HTSAS+T+NENADPDVRTDME ALN+IVP +W+R+ F H +EG DDM GHVKSSL+G S+ IP+ G+LALGTWQG+YL EHRD GG+GGGHARNI++T+QG
Sbjct: 54 TMKPLWFQHEITVTAPKRGCHLITADIQKAAGESIRQCQIGLCNIFVQHTSASLTINENADPDVRTDMETALNKIVPAQWNRDGTFRHTMEGDDDMPGHVKSSLMGVSLTIPIRQGRLALGTWQGIYLNEHRDQGGWGGGHARNIIITIQG 204
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Match: B7GA21_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GA21_PHATC) HSP 1 Score: 204 bits (520), Expect = 1.360e-59 Identity = 96/148 (64.86%), Postives = 122/148 (82.43%), Query Frame = 3
Query: 96 PSWAQRTVTVTAPSRGCHLITSEIVRQMPE-LREFKVGMANVFLKHTSASITLNENADPDVRTDMEAALNEIVPVKWHRE-MFTHVLEGPDDMTGHVKSSLVGASIDIPVTNGKLALGTWQGVYLCEHRDSGGFGGGHARNIVVTVQG 533
P W Q +TVTAPSRGCHLIT +I + + + L + +GM NVF++HTSAS+T+NENADPDVR DME ALN+IVP +W+R+ F H LEG DDM GHVKSSL+GAS++IPV +G+LALGTWQG+YL EHRD GG+GGGH R++++TVQG
Sbjct: 4 PLWFQHEITVTAPSRGCHLITRDIQKALQDDLPKVHIGMCNVFVQHTSASLTINENADPDVRGDMETALNKIVPAQWNRDGTFKHTLEGDDDMPGHVKSSLMGASLNIPVKSGRLALGTWQGIYLNEHRDQGGWGGGHQRSVIITVQG 151 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1670.4804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1670.4804.1 >prot_Ecto-sp13_S_contig1670.4804.1 ID=prot_Ecto-sp13_S_contig1670.4804.1|Name=mRNA_Ecto-sp13_S_contig1670.4804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp MYCIPVCQPQSIMTGKPSWAQRTVTVTAPSRGCHLITSEIVRQMPELREFback to top mRNA from alignment at Ecto-sp13_S_contig1670:9687..14688+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1670.4804.1 ID=mRNA_Ecto-sp13_S_contig1670.4804.1|Name=mRNA_Ecto-sp13_S_contig1670.4804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5002bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1670:9687..14688+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1670:9687..14688+ >mRNA_Ecto-sp13_S_contig1670.4804.1 ID=mRNA_Ecto-sp13_S_contig1670.4804.1|Name=mRNA_Ecto-sp13_S_contig1670.4804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1670:9687..14688+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |