prot_Ecto-sp13_S_contig16697.4798.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16697.4798.1
Unique Nameprot_Ecto-sp13_S_contig16697.4798.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length520
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16697.4798.1 vs. uniprot
Match: D7FP74_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP74_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 9.370e-93
Identity = 327/341 (95.89%), Postives = 330/341 (96.77%), Query Frame = 0 
Query:   17 MIGRDQQHAFLRGFEPELVKLVFDTATDEQLAAWLRLSLELAADNNHLELISRLENAGAEGSRFHLAVRQGNGILVTDTMKRGESPDARDGNGDAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXXXXXXXXKHGADMDGAASTGLTLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNPRIEKDVVNLRFGREPSPLELAACHGHAHVVRTMLRHGADVDSKDCPYQPALHRAA 357
            MIGRDQQHAFLRGFEPELVKL+FDTAT EQL AWLRLSLELAADN HLELISRLENAGA GSRFHLAVRQGNG+LV DT+KRGESPDARDGNGDAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXXXXXXX KHGADMD AASTGLTLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNP IE DVVNLRFG EPSPLELAACHGHAHVVRTMLRHGADVDS DCPYQPALHRAA
Sbjct:    1 MIGRDQQHAFLRGFEPELVKLMFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDARDGNGDAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXXXXXXXAKHGADMDAAASTGLTLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNPIIENDVVNLRFGGEPSPLELAACHGHAHVVRTMLRHGADVDSTDCPYQPALHRAA 341
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BLAST of mRNA_Ecto-sp13_S_contig16697.4798.1 vs. uniprot
Match: A0A6H5JKG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG9_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 5.520e-43
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0 
Query:   17 MIGRDQQHAFLRGFEPELVKLVFDTATDEQLAAWLRLSLELAADNNHLELISRLENAGAEGSRFHLAVRQGNGILVTDTMKRGESPDAR 105
            M+GRD QHA LRGFEPELV+LVFDTAT EQL AWLRLSLELAADN HLELISRLENAGA GSRFHLAVRQGNG+LVTDT+KRGESP+AR
Sbjct:    1 MVGRDHQHACLRGFEPELVRLVFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVTDTIKRGESPNAR 89
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BLAST of mRNA_Ecto-sp13_S_contig16697.4798.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.240e-6
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0 
Query:   27 LRGFEPELVKLVFDTATDEQLAAWLRLSLELAADNNHLELISRLENAGAEGSRFHLAVRQGNGILVTDTMKRGESPDARDGNGD 110
            LRG E  +  LV       Q A WLR  LE AA   +++L+++L+ AGA GS  HLA+R G   L  + ++ G    A+D NGD
Sbjct:   26 LRGTEKTIFDLVCAGTNRRQWAEWLRTPLEHAAGVGNIDLVTKLQGAGAGGSALHLALRAGQDALAQELLRLGAPTKAKDNNGD 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16697.4798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FP74_ECTSI9.370e-9395.89Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
A0A6H5JKG9_9PHAE5.520e-4387.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G751_ECTSI1.240e-640.48Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 331..345
score: 34.3
coord: 142..157
score: 42.72
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 141..170
e-value: 0.025
score: 23.8
coord: 50..82
e-value: 3700.0
score: 0.7
coord: 108..137
e-value: 1.1E-4
score: 31.6
coord: 414..443
e-value: 0.054
score: 22.6
coord: 241..270
e-value: 0.0081
score: 25.4
coord: 447..476
e-value: 8.0E-5
score: 32.0
coord: 381..410
e-value: 0.31
score: 20.1
coord: 208..237
e-value: 0.074
score: 22.2
coord: 348..377
e-value: 0.003
score: 26.8
coord: 175..204
e-value: 0.022
score: 23.9
coord: 315..344
e-value: 0.001
score: 28.4
coord: 274..304
e-value: 230.0
score: 9.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 319..347
e-value: 0.01
score: 16.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 241..273
score: 10.98
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 447..479
score: 13.277
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 315..347
score: 11.621
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 414..446
score: 11.354
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 141..166
score: 10.018
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 175..207
score: 10.793
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 381..413
score: 10.312
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 352..380
score: 12.048
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 208..240
score: 11.194
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 108..140
score: 15.12
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 306..426
e-value: 1.3E-32
score: 114.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 427..500
e-value: 2.9E-16
score: 61.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 24..305
e-value: 9.4E-60
score: 204.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 55..294
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 309..487
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 113..203
e-value: 2.1E-14
score: 53.8
coord: 416..475
e-value: 5.1E-10
score: 39.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 75..484
score: 109.513
NoneNo IPR availablePFAMPF13637Ank_4coord: 243..292
e-value: 2.3E-6
score: 28.1
coord: 351..401
e-value: 1.4E-9
score: 38.3
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 174..345
coord: 97..238
coord: 352..410
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 52..201
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 416..491
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 416..491
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 174..345
coord: 97..238
coord: 352..410
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 52..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16697contigEcto-sp13_S_contig16697:1429..3820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16697.4798.1mRNA_Ecto-sp13_S_contig16697.4798.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16697 1413..3820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16697.4798.1 ID=prot_Ecto-sp13_S_contig16697.4798.1|Name=mRNA_Ecto-sp13_S_contig16697.4798.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=520bp
MHTPSSALSKHRGRTRMIGRDQQHAFLRGFEPELVKLVFDTATDEQLAAW
LRLSLELAADNNHLELISRLENAGAEGSRFHLAVRQGNGILVTDTMKRGE
SPDARDGNGDAPLHIAGARGDVDLVRLLLSSGADPNLPDRKQRTPLHVAA
RYGHAETAGALLSGGAWVSPFLDSESCSPLELAVRHGHVDVVGVLAKHGA
DMDGAASTGLTLLHLAASEDMVDLLQCLVAAGASLESRDMDGSTALHIAA
EKGAAAAVKVLLALGARPCESNGDSLSPLGLACKGGHLQAVLAILAANHR
NPRIEKDVVNLRFGREPSPLELAACHGHAHVVRTMLRHGADVDSKDCPYQ
PALHRAADGGHVDVLQVLIDHGADLDAVDADAETALHHAATFDQSGAVDV
LVRAGANIEAVGEELYTPLHLACQFRKREATRALLAHGANVQTADENGCT
PLHSAASNADAQVVELLLRFGADAAATSAAGSTAAEVIAHNCDGEQVQAE
KIEQLESLLICAGLDDINND
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom