prot_Ecto-sp13_S_contig16693.4797.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16693.4797.1
Unique Nameprot_Ecto-sp13_S_contig16693.4797.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp13_S_contig16693.4797.1 vs. uniprot
Match: D8LN37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN37_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 9.440e-50
Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:   56 QTWRTMKRAESSTPGARRRARTQDTSTYQLGNGLVRGKVNREILQTVFGEALMSSIAAYNSPLEWDGLLLSDSDDEGEKEGQGQDDADLIGTDQTAGKLQ 155
            +TWR MKRAESSTPGARR ARTQDTSTYQ+G+GLVRGKVNREILQTVFGEAL +SIA YNSP EWDGLL SDSDDEGEK+GQ +DDADLIGTDQT  KLQ
Sbjct:   39 KTWRRMKRAESSTPGARRHARTQDTSTYQVGDGLVRGKVNREILQTVFGEALKTSIAVYNSPQEWDGLLFSDSDDEGEKKGQSKDDADLIGTDQTTWKLQ 138          
BLAST of mRNA_Ecto-sp13_S_contig16693.4797.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 3.170e-45
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 0
Query:   46 SDGLLFLMLLQTWRTMKRAESSTPGARRRARTQDTSTYQLGNGLVRGKVNREILQTVFGEALMSSIAAYNSPLEWDGLLLSDSDDEGEKEGQGQDDADLIGTDQTAGKLQVVVSGPKAFVVNVWELLSDMGVPSACTVLLD 186
            + G+  L+  +TWR ++R++SSTPGA RR   QD+STYQ+G+GLVRGKVNREIL+TVFGEAL + IAA N   E   LL SDSD   EKEGQ +DD DL  TDQT+ KLQVVVSGP  FV NVW+LL  MGVPS C VLLD
Sbjct: 1349 TTGVGKLLPKKTWRNLRRSDSSTPGAHRRPPIQDSSTYQVGDGLVRGKVNREILETVFGEALTTPIAADNRQREVKSLLRSDSDISDEKEGQDEDDGDLTSTDQTSRKLQVVVSGPSEFVANVWQLLDQMGVPSGCMVLLD 1489          
BLAST of mRNA_Ecto-sp13_S_contig16693.4797.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 2.030e-44
Identity = 90/135 (66.67%), Postives = 104/135 (77.04%), Query Frame = 0
Query:   52 LMLLQTWRTMKRAESSTPGARRRARTQDTSTYQLGNGLVRGKVNREILQTVFGEALMSSIAAYNSPLEWDGLLLSDSDDEGEKEGQGQDDADLIGTDQTAGKLQVVVSGPKAFVVNVWELLSDMGVPSACTVLLD 186
            L+  +TWR  K  ES T   RRRA  QDTS YQ+G+GLVRG+VNREIL+TVFGEAL+SSIAAYN     + L  SDSD    KEG+G+DD DLIGTDQTAGKLQVVVSGP AFV NV +LL++MGVP+  TVLLD
Sbjct: 1356 LLTTRTWRNSKWNESPTTSGRRRAPMQDTSNYQVGDGLVRGRVNREILETVFGEALISSIAAYNRQRALNSLACSDSDVGDNKEGEGEDDRDLIGTDQTAGKLQVVVSGPTAFVANVKQLLTEMGVPAGSTVLLD 1490          
BLAST of mRNA_Ecto-sp13_S_contig16693.4797.1 vs. uniprot
Match: A0A6H5JTF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTF1_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.770e-37
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 0
Query:   83 YQLGNGLVRGKVNREILQTVFGEALMSSIAAYNSPLEWDGLLLSDSDDEGEKEGQGQDDADLIGTDQTAGKLQVVVSGPKAFVVNVWELLSDMGVPSACTVLLD 186
            YQ+G+GLVRG+VNREIL+ VFGEAL+SSIAAYN     + L  SDSD   EKEGQG+DD +LIGTDQTAGKLQVVVSGP AFV NV +LL+ MGVP+  TVLLD
Sbjct:  236 YQVGDGLVRGRVNREILENVFGEALLSSIAAYNRQRALNSLACSDSDVGDEKEGQGEDDGELIGTDQTAGKLQVVVSGPTAFVANVKQLLTQMGVPAGSTVLLD 339          
BLAST of mRNA_Ecto-sp13_S_contig16693.4797.1 vs. uniprot
Match: A0A6H5J9F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9F0_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 6.530e-14
Identity = 49/110 (44.55%), Postives = 60/110 (54.55%), Query Frame = 0
Query:   85 LGNGLVRGKVNREILQTVFGEALMSSIAAY-------NSPLEWDGLLLSDSDDEGEKE-GQGQDDADLIGTDQTAGKLQVVVSGPKAFVVNVWELLSDMGVPSACTVLLD 186
            LG+GL+RGKV REILQ  FG AL++ +  +       +              DEG  E  +G    DL GTD   GKLQVVVSGP  FV  V  +L++MGVPS   V LD
Sbjct:    9 LGDGLLRGKVTREILQKAFGPALLALLEEFAKQEQSRHXXXXXXXXXXXXKRDEGSPEDARGITLDDLAGTDTEGGKLQVVVSGPNGFVFYVESILAEMGVPSEAIVFLD 118          
BLAST of mRNA_Ecto-sp13_S_contig16693.4797.1 vs. uniprot
Match: A0A6H5JGS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS9_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 7.820e-5
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 0
Query:   89 LVRGKVNREILQTVFGEALMSSIAAYNSPLEWDGLLL---------------SDSDDEGEKEGQGQDDADLIGTDQTAGKLQVVVSGPKAFVVNVWELLSDMGVPSACTVLLD 186
            L RGKVNRE+L  VFG +L+  + A  +  + D   +               S +   G+ + + QD+ D    ++   +LQVVVS P  FV  V  +L +MG+PS+  VLLD
Sbjct:   15 LTRGKVNREVLDEVFGPSLLGILEAARTK-DKDSPTMDRRQPRVTGSTANTSSAAKGGGDLKAEEQDEEDHYNDNE---RLQVVVSEPTVFVSLVETILGEMGIPSSAIVLLD 123          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16693.4797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LN37_ECTSI9.440e-5085.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G7J1_ECTSI3.170e-4563.83Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7G7J2_ECTSI2.030e-4466.67Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JTF1_9PHAE1.770e-3771.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9F0_9PHAE6.530e-1444.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGS9_9PHAE7.820e-534.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..186
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16693contigEcto-sp13_S_contig16693:242..1472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16693.4797.1mRNA_Ecto-sp13_S_contig16693.4797.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16693 16..2323 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16693.4797.1 ID=prot_Ecto-sp13_S_contig16693.4797.1|Name=mRNA_Ecto-sp13_S_contig16693.4797.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MRAVCPKRIVGGSSLSLRRECWRYSHHLTCVSTICCIFMVVARSCSDGLL
FLMLLQTWRTMKRAESSTPGARRRARTQDTSTYQLGNGLVRGKVNREILQ
TVFGEALMSSIAAYNSPLEWDGLLLSDSDDEGEKEGQGQDDADLIGTDQT
AGKLQVVVSGPKAFVVNVWELLSDMGVPSACTVLLD*
back to top