prot_Ecto-sp13_S_contig16689.4793.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16689.4793.1
Unique Nameprot_Ecto-sp13_S_contig16689.4793.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Match: A0A6H5JPA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA7_9PHAE)

HSP 1 Score: 494 bits (1271), Expect = 1.490e-167
Identity = 284/308 (92.21%), Postives = 288/308 (93.51%), Query Frame = 0
Query:    1 MVRGDPTAVRMGAVAGPEAATSRPALLVTIGPQCAGKTNLLRALAAKSEAARXXXXXXXXXXXXXXXXXXXXX------VSSVVDITIDDHPSVYHKIPTALLLGGCPRGSPEDLLLARRPLSDRLGDPGCVETRLLAFRLEGHISAEEFAGRLGECRGQVSPAAIAALCWAVESAVSDNVRISTPTVHIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            MVRG PTAVRMGAVAGPEAA SRPALLVTIGPQCAGKT+LLRALAAKSEAA XXXXXXXXXXXXXXXXXXXXX      V SV D+TIDDHPSVYHKIPTALLLGGC RG PEDLLLARR LSDRLGDPGCVETRL+AFRLEGHISAEEFAGRLGECRGQ SPAAIAALCWAVESAVSDN RISTPTV +FVRENLFPDAIS SQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELP LSLEELSRRNVCRFACTGRYVETAAIENALARV KLYASTAGGDPARLALAA
Sbjct:  261 MVRGGPTAVRMGAVAGPEAAASRPALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRSVADVTIDDHPSVYHKIPTALLLGGCARGCPEDLLLARRSLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRGQASPAAIAALCWAVESAVSDNGRISTPTVDVFVRENLFPDAISSSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPILSLEELSRRNVCRFACTGRYVETAAIENALARVDKLYASTAGGDPARLALAA 568          
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Match: D8LAX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX8_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 1.800e-150
Identity = 238/292 (81.51%), Postives = 244/292 (83.56%), Query Frame = 0
Query:   11 MGAVAGPEAATSRPALLVTIGPQCAGKTNLLRALAAKSEAARXXXXXXXXXXXXXXXXXXXXXVSSVVDITIDDHPSVYHKIPTALLLGGCPRGSPEDLLLARRPLSDRLGDPGCVETRLLAFRLEGHISAEEFAGRLGECRGQVSPAAIAALCWAVESAVSDNVRISTPTVHIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            MGAVAG EAAT+RPALLVTIGPQCAGKT+LLRALAAKSE                                      VYHKIPTALLLGGC RGSPEDLLLA+RPLSDRLGDPGCVETRL+ FRLEGHISAEEFAGRLGECRGQ SPAAIAALC AVESAVSDNVRISTPTV +FVRENLFPDAIS SQERLAAAA DE+GLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFA TGRYVETAAIENALARV KLYASTAGGDPARLALAA
Sbjct:    1 MGAVAGAEAATNRPALLVTIGPQCAGKTSLLRALAAKSE--------------------------------------VYHKIPTALLLGGCARGSPEDLLLAQRPLSDRLGDPGCVETRLVTFRLEGHISAEEFAGRLGECRGQASPAAIAALCRAVESAVSDNVRISTPTVDVFVRENLFPDAISSSQERLAAAATDEDGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFAYTGRYVETAAIENALARVDKLYASTAGGDPARLALAA 254          
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Match: A0A835Z5Q0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 5.750e-53
Identity = 121/280 (43.21%), Postives = 154/280 (55.00%), Query Frame = 0
Query:   26 LLVTIGPQCAGKTNLLRALAAKSEAARXXXXXXXXXXXXXXXXXXXXXVSSVVDITIDDHPSVYHKIPTALLLGGCPRGSPEDLLLARRPLSDRLGDPGCVETRLLAFRLEGHISAEEFAGR-LGECRGQVSPAAIAALCW--AVESAVSDNVRISTPTVHIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            LL+TIGPQCAGKT  L AL      AR                        + D+ IDDHP VY+K+PTA  L        +D+LL  + +S+R+ D   V   L+A RLEG ++A+EF  + L        P       W  AVE+AV+  +R+ TPTV +FV    +P  +  S  RL        G VAWGNTNT+++DYR ALE A+   RPVR+LRWGHELP + L +L  R++ RFA TGRYV   A+  AL RV  LYA T GGDPA L  AA
Sbjct:   94 LLITIGPQCAGKTTTLLALGQSLGGAR------------------------ICDVAIDDHPDVYYKLPTACALDPDSITPQQDVLLFDKTVSERMADYTVVGKCLVAKRLEGLLTADEFREQWLSSVEFYPYPDGEVEELWIAAVEAAVAAGLRMETPTVDLFVPNGHYPRGVRDSNRRLRQECSRHPGPVAWGNTNTKSKDYREALECAQAVNRPVRYLRWGHELPAVPLRDLFARDLRRFAATGRYVPPQAVAAALRRVEHLYARTDGGDPALLTAAA 349          
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Match: A0A835YGB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB3_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.150e-44
Identity = 112/284 (39.44%), Postives = 149/284 (52.46%), Query Frame = 0
Query:   26 LLVTIGPQCAGKTNLLRALAAKSEAARXXXXXXXXXXXXXXXXXXXXXVSSVVDITIDDHPSVYHKIPTALLLGGCPRGSP-EDLLLARRPLSDRLGDPGCVETRLLAFRLEGHISAEEFAGRLGECRGQVSPAAIA------ALCWAVESAVSDNVRISTPTVHIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            LL+TIGPQCAGKT  LR +                                V D+ ID+HP VY+++PTA +L   P  +  ED+ +  R LSDRL   G     L+A RLEG +S+ +F     E +    P  +A          +VE+AV++ VR+  PTV +F+ E   P  +      L        G VAWGNTNT+ARDY  AL  A+   RPV F+R+GHE+P +S+ EL  RN+ RFA TGR++    +  A  RV  LYA T GG+PARLA AA
Sbjct:   71 LLITIGPQCAGKTTTLRKMG-------------------------------VFDVAIDEHPDVYYELPTAYILD--PTSTTLEDVTIFGRRLSDRLQYTGVYANMLVAQRLEGLLSSAKFEA---EWKAIAGPYLLADRDVDRIFLESVEAAVAEGVRLYAPTVDLFLPEGHAPKGMREHSVVLRYECHRRRGAVAWGNTNTRARDYAAALATAQECTRPVHFVRYGHEIPAISIRELFGRNLRRFAATGRFIPPQTMWAARQRVKHLYARTGGGEPARLAAAA 318          
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Match: W7TBP9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBP9_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.360e-15
Identity = 87/288 (30.21%), Postives = 116/288 (40.28%), Query Frame = 0
Query:   24 PALLVTIGPQCAGKTNLLRALAAKSEAARXXXXXXXXXXXXXXXXXXXXXVSSVVDITIDDHPSVYHKIPTALLLGG-------CPRGSPEDLLLARRPLSDRLGDPGCVETRLLAFRLEGHISAEEFAGRL---------------------GECRGQ--------VSPAAIAALCWAVESAVSDNVRISTPTV---HIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHEL-PFLSLEELSRRNVCRFACTGRYV 271
            P+LL+T+GPQCAGKT LL+ L     +                          +VD+ IDD   +Y  +P  L L G              D L+  R LS R  D   VE+RL+   L G    E     L                       C  +        +   A A    A  + V      S P      +F+ + L P AI  S +RL  +     G VAWGNTN++ARD++ A+  A + GR V F+RWG EL   +  EEL  RNV R    G+YV
Sbjct:   87 PSLLITVGPQCAGKTTLLKHLNESRPS----------------------FAPPLVDVAIDDQAGLYVPLPMPLFLEGGRXXXXXXXXXXSLDKLIKGRTLSSRCDDSATVESRLVLGYLHGMWEIENVEQALRALTSXXXXXXXXXXXXXXXXXXCPSEEDEWITLLLHALAKARATIATTTKVDTVATWSPPAASHYQLFLPD-LLPQAIRRSYQRLTRSLCGP-GPVAWGNTNSKARDFKEAILLAGKAGRRVLFIRWGKELGKEVGKEELVLRNVWRAYREGKYV 350          
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Match: A0A4D9D5F8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.890e-11
Identity = 49/105 (46.67%), Postives = 61/105 (58.10%), Query Frame = 0
Query:  189 NLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHEL-PFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAG 292
            +L P AI  S +RL+ +     G VAWGNTN++ARD++ A+  A + GR VRFLRWG EL   +  EEL  RNV R    G+YV   AI  AL R   L    AG
Sbjct:  102 DLLPQAIRRSYQRLSRSLCGP-GPVAWGNTNSKARDFKEAILLAGKAGRRVRFLRWGKELGKEVGKEELILRNVWRAYREGKYVPVRAISAALERTKVLLDGRAG 205          
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Match: B8C738_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C738_THAPS)

HSP 1 Score: 70.9 bits (172), Expect = 5.160e-10
Identity = 72/283 (25.44%), Postives = 118/283 (41.70%), Query Frame = 0
Query:   17 PEAATSRPALLVTIGPQCAGKTNLLRALAAKSEAARXXXXXXXXXXXXXXXXXXXXXVSSVVDITIDDHPSVYHKIPTALLLGGCP----RGSPEDLLLARRPLSDRLGDPGCVETRLLAFRLEGHISAEEFAGRLG--ECRGQVSPAA---------IAALCWAVESAVSDNV----------------RISTPT-VHIFVRENLF---------------PDAISCSQ-ERLA------AAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWG 245
            P +  S+  + +T+GPQC GKT +L+ L                              +  +DITIDD   VY  +P  L L        + S  +  +  + + DR+ DP   E +L+  RL G ++A +F  RL   +  GQ   +A         +A L  AVE  +  N                 +++ P  + +FV E++F               P + +  + +RL       ++  D    +AWGNTNT+ R++  A+E A  +GRPV F+ +G
Sbjct:   94 PPSTQSKGPIYITVGPQCCGKTTILKRLFGT---------------VFHNNEEEGGASTGGLDITIDDQELVYFPVPIQLFLPDAALPSEQRSTSNQSILGKSVRDRVVDPSNNELKLVIQRLAGKLTAGDFIERLNNPQKNGQQQQSAPLQKNQKAVVADLVSAVEEVIKINTDPKGETTENSMFFAATKLTLPKQIDLFVVESIFRPRPLELMRNTKNNTPSSSALDEAQRLIKSISTDSSVHDSAAPLAWGNTNTRPREFLSAMEAATLSGRPVEFIVFG 361          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16689.4793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JPA7_9PHAE1.490e-16792.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAX8_ECTSI1.800e-15081.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z5Q0_9STRA5.750e-5343.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YGB3_9STRA1.150e-4439.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TBP9_9STRA8.360e-1530.21Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A4D9D5F8_9STRA3.890e-1146.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
B8C738_THAPS5.160e-1025.44Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16689contigEcto-sp13_S_contig16689:1063..3854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16689.4793.1mRNA_Ecto-sp13_S_contig16689.4793.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16689 1060..3854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16689.4793.1 ID=prot_Ecto-sp13_S_contig16689.4793.1|Name=mRNA_Ecto-sp13_S_contig16689.4793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MVRGDPTAVRMGAVAGPEAATSRPALLVTIGPQCAGKTNLLRALAAKSEA
AREERRSSGDGGMTSGNTAAAAAVSSVVDITIDDHPSVYHKIPTALLLGG
CPRGSPEDLLLARRPLSDRLGDPGCVETRLLAFRLEGHISAEEFAGRLGE
CRGQVSPAAIAALCWAVESAVSDNVRISTPTVHIFVRENLFPDAISCSQE
RLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPF
LSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLAL
AA
back to top