mRNA_Ecto-sp13_S_contig16681.4790.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A6H5LAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU0_9PHAE) HSP 1 Score: 486 bits (1250), Expect = 1.010e-171 Identity = 258/265 (97.36%), Postives = 259/265 (97.74%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 870
RARLLGDTTFMTKLAIEMVTGT AQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLET SAW TAAAAAP V G+GAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ
Sbjct: 39 RARLLGDTTFMTKLAIEMVTGTGAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWTTAAAAAPPVVAGKGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 303
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: D7FZL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL4_ECTSI) HSP 1 Score: 481 bits (1238), Expect = 5.590e-168 Identity = 258/264 (97.73%), Postives = 259/264 (98.11%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 867
RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGK+FMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLET SAWRTAAAAAP VV RGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVD LRYVGVQ
Sbjct: 163 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKKFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAAAAPPVVVERGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDGLRYVGVQ 426
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A836CF64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF64_9STRA) HSP 1 Score: 184 bits (467), Expect = 5.690e-54 Identity = 115/242 (47.52%), Postives = 144/242 (59.50%), Query Frame = 1
Query: 148 QFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAG--GTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 867
Q LAEY+KR +F +E DFV AD LT FANFAAVW SCPT+ +AA G +L +F+ +CPSNAFQ+VVA + +S+A+RGAAL+ PMP+LFVIGFGA AGYGL + + I A PT V E+A P+ S LA+G FLAV +NLRYQ IAG +EQR D LA P +S+ S +R+ANLY+G+ IVDWLR VGVQ
Sbjct: 2 QVLAEYEKRRDKFFKEFDFVLADILTSCFANFAAVWASCPTMRPAIAGSADAASKGMFASLGRFMNSCPSNAFQRVVAP---ATHYSLAQRGAALIKPMPQLFVIGFGACAAGYGLTSLMSHIRL-----ALDPTMVKN---------------------TEDA-----PIFKSSLAIGAFLAVSSNLRYQIIAGGIEQRFLDVALASKPAVSNACSFVLRTANLYLGASMIVDWLRIVGVQ 209
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A7S1EMP3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EMP3_HEMAN) HSP 1 Score: 152 bits (384), Expect = 8.930e-41 Identity = 101/265 (38.11%), Postives = 145/265 (54.72%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 870
R RLL D TF+ K+AIE+V G A Q +AEYQ RGK F++E DFV A TC+ ANF ++L+ PT+ KA +A A KF +CP NAFQ V+ +G + +F +R + PMP+LF IG A GY A + + KS+ G A + + G+AVG ++A+ +NLRYQF+AG +EQR+ DT+LA L + ST +R+AN Y+GS +V +LR++G+Q+
Sbjct: 57 RDRLLADNTFLNKVAIEVVIGGAMQLIAEYQNRGKAFVKEFDFVIAGIATCVLANFFTLYLAAPTLVPKAASLTTSAVA-----KFFNSCPDNAFQTVL-KGMPAPSF--VQRCGGIFKPMPELFFIGLVAASGGYLYTACNVAVRKFFNP--------------KSQGG---------------ADLDALQIGKIGVAVGAYVAISSNLRYQFMAGVLEQRVLDTLLAGQVSLRTAGSTVIRTANTYLGSYLLVAYLRWLGLQK 284
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A7S3XYV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV0_HETAK) HSP 1 Score: 152 bits (384), Expect = 9.870e-41 Identity = 96/266 (36.09%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPP---VPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGV 864
R RL+ D +F+TK A+E+ G Q AE ++RG + +Q+LDFV AD LTC+ ANF AVWL+ PT+A A A AG +++F +CP NAFQKV F+VA+R L+ P+LF++GF A++AG+G GL + +K A+ EE P V VL L +G +L V TN+RYQ +AG +E+R+ + A L++ S R+ N +VGS +V L++ G+
Sbjct: 64 RNRLMNDPSFLTKCAMEIGIGGVCQLAAEVKERGDKLLQQLDFVVADVLTCVIANFMAVWLAAPTLAALA---PPPAAAGNAVKRFFDSCPGNAFQKVTPGRA---PFTVAQRCGTLVGAFPQLFLVGFAASVAGFGFTLGLSKLR----------------------------EKLNPASAEEEPLGGPAKEVQVLKPALVIGAYLGVSTNVRYQLVAGLLEERLLGALFANQQFLNTAGSFIFRTGNTFVGSSQMVMTLKWTGL 295
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A251VLI5_HELAN (Uncharacterized protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VLI5_HELAN) HSP 1 Score: 147 bits (372), Expect = 3.170e-38 Identity = 99/265 (37.36%), Postives = 144/265 (54.34%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 870
+ RLL D FMTK+AIE G + AE +KR + F +ELDFV AD + L A+F VWL PTV+++A A + G + KF A CP NAFQ VA G S +S+ +R A+ KLF +G GA+L G G+ L A+KA A EA + +P+L + +A G+++AV +NLRYQ IAG +EQR+ + +L ++ + S AVR+ N ++GSL VD+ R++G+Q+
Sbjct: 146 KERLLADDLFMTKVAIECGVGIFTKSAAELEKRRENFSKELDFVTADVIMALIADFMLVWLPAPTVSLRA----PVAVSAGRVAKFFAGCPDNAFQ--VALAGTS--YSLLQRIGAIARNGAKLFGVGTGASLIGTGITNLLIN-----------------------------ARKAVDKTFAAEADEEDIPILSTSVAYGVYMAVSSNLRYQVIAGVIEQRMLEPLLHQHKLILSAICFAVRTGNTFLGSLMWVDYARWIGIQR 373
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A388L9G5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L9G5_CHABU) HSP 1 Score: 147 bits (370), Expect = 4.900e-37 Identity = 101/265 (38.11%), Postives = 144/265 (54.34%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 870
R RLL D F++K+ E G + AEY++R RFM+ELDFV AD + + A+F VWL PTVA++A AK + KF CP NAFQ VA G T+++ +R A++ KLF +G GA+L G GL + +R +AA E+A+ VP+L + +A G ++AV +NLRYQ +AG VEQRI + +L + SL+S AVR+AN ++GSL VD+ +VGVQ+
Sbjct: 265 RERLLADDLFVSKVLFECGIGVCTKTAAEYERRRDRFMKELDFVFADVIMAIIADFMLVWLPAPTVAIRA----PIAKGANSFAKFFYNCPDNAFQ--VALNGT--TYTLLQRCGAIVRNGAKLFAVGTGASLVGTAATNGLIAV--------------------------RRILDPSSAASGEDAED--VPILETSVAYGAYMAVSSNLRYQVLAGVVEQRILEPLLHQQKLALSLSSFAVRTANTFLGSLLWVDYAIWVGVQK 493
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A151TLP3_CAJCA (Uncharacterized protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TLP3_CAJCA) HSP 1 Score: 143 bits (361), Expect = 1.040e-36 Identity = 98/265 (36.98%), Postives = 144/265 (54.34%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 870
R RLL D F+TK+AIE G + AE +KR ++F +ELDFV AD + + A+F VWL PTV+++ A + GT+ KF CP NAFQ VA G S +++ +R A++ KLF +G GA+L G G+ L A+K + A EA+ VPV+ + +A G+++AV +NLRYQ +AG +EQRI + +L + + S AVR+ N ++GSL VD+ R+VGVQ+
Sbjct: 138 RERLLADDLFLTKVAIECGVGIFTKTAAELEKRKEKFSKELDFVCADVIMAIVADFMLVWLPAPTVSLR----PPLAVSAGTIAKFFYGCPENAFQ--VALAGTS--YTLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALIN-----------------------------ARKVVDKSFAAEAED--VPVISTSIAYGVYMAVSSNLRYQILAGIIEQRILEPLLHQQKLILSAICFAVRTGNTFLGSLLWVDYARWVGVQR 363
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: A0A443PX79_9MAGN (Protein RETICULATA-RELATED 4, chloroplastic-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PX79_9MAGN) HSP 1 Score: 143 bits (361), Expect = 1.440e-36 Identity = 98/265 (36.98%), Postives = 142/265 (53.58%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEA-QKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQ 867
+ RLL D F+ K+ +E+V G A+ AEY +RG++F +ELDFV AD + + A+F VWL PTV+++ A + G + KF CP NAFQ +A G S +S +R A+ KLFV+G A++ G G+ L KAR A E A + VP+L + +A G+++AV +NLRYQ +AG VEQRI + +L ++ + S AVR+ N Y+GSL VD+ R+VGVQ
Sbjct: 158 KERLLADELFLHKITMEIVVGMFAKTAAEYNRRGEKFFKELDFVIADVVMAIIADFMLVWLPAPTVSLR----PPLAISAGPIAKFFHTCPDNAFQ--IALRGTS--YSFLQRIGAIARNGAKLFVVGTSASMVGTGVTNALI--------------------------------KARKAVNTEYAGEVEDVPILSTSVAYGVYMAVSSNLRYQLLAGVVEQRILEPLLHQHKLMLSAMCFAVRTGNTYLGSLMWVDYARWVGVQ 382
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Match: UPI001CFB8E93 (protein RETICULATA-RELATED 4, chloroplastic-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFB8E93) HSP 1 Score: 143 bits (361), Expect = 1.710e-36 Identity = 98/265 (36.98%), Postives = 145/265 (54.72%), Query Frame = 1
Query: 76 RARLLGDTTFMTKLAIEMVTGTAAQFLAEYQKRGKRFMQELDFVAADTLTCLFANFAAVWLSCPTVAVKAVCKKEAAKAGGTLQKFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETISAWRTAAAAAPTAVVGRGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 870
+ RLL D F+TK+AIE G + AE ++R + F +ELDFV AD + + A+F VWL PTVA++A A + G + KFL CP NAFQ VA G S +S +R A++ KLF +G GA+L G G+ L + +KA + A+EA+ VPVL + +A G+++AV +NLRYQ +AG +EQRI + +L ++ + S VR+ N ++GSL VD+ R+VG+Q+
Sbjct: 163 KERLLADDLFLTKVAIECGVGIFTKTAAELERRRENFTKELDFVFADVVMAIIADFMLVWLPAPTVALRA----PLAVSAGPIAKFLHNCPDNAFQ--VALAGTS--YSFLQRIGAIMRNGAKLFAVGTGASLIGTGITNALINV-----------------------------RKAFDKSFADEAED--VPVLSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFVVRTGNTFLGSLMWVDYARWVGIQK 388 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16681.4790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16681.4790.1 >prot_Ecto-sp13_S_contig16681.4790.1 ID=prot_Ecto-sp13_S_contig16681.4790.1|Name=mRNA_Ecto-sp13_S_contig16681.4790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp DPEGVLERLREAPDVAVDVSPLQEQRARLLGDTTFMTKLAIEMVTGTAAQback to top mRNA from alignment at Ecto-sp13_S_contig16681:288..3761+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16681.4790.1 ID=mRNA_Ecto-sp13_S_contig16681.4790.1|Name=mRNA_Ecto-sp13_S_contig16681.4790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3474bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16681:288..3761+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16681:288..3761+ >mRNA_Ecto-sp13_S_contig16681.4790.1 ID=mRNA_Ecto-sp13_S_contig16681.4790.1|Name=mRNA_Ecto-sp13_S_contig16681.4790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16681:288..3761+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |