mRNA_Ecto-sp13_S_contig16680.4789.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16680.4789.1
Unique NamemRNA_Ecto-sp13_S_contig16680.4789.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: D7G077_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G077_ECTSI)

HSP 1 Score: 828 bits (2139), Expect = 2.560e-292
Identity = 443/569 (77.86%), Postives = 472/569 (82.95%), Query Frame = 1
Query:    1 QKIHKRQRCYSADEASEVGQQCKEKIHKEGQRAATTKASEAAGASAACAPASATNEVAADNKAVRRRLLSRLLAIDVFRPDSVGDLDGLHPAGITYTLASVNLSRYVSVPAGTSITCSSSPLNQRLQTALDSLSKNLENHGTVLLSVPAETQETNLLTDMFKKAGLRVEENRVLSTYAGPEGSGGQSSITVVAHKDGERFICNPGGRTRDGEGET-HTPRASTPPCVQRHVDAALDPVIGKRSSRAPAEGSLIREALTTFLIKRYTDRFDAVLTTDAAVDTTVCEGALKFERKLVALVPDFGKVDSVRQNVANWEDKHRCGEGVELRRLQGGVTLPINIPDSNVRRSLAPRVWVSRDRRPVNVPHSIVPREVAVEVAWTQPQHAPHVISPEQQVAAMAAKKMELEIKASNRHGLGLFAKEAMAAGDAMSMDCFGSFVVHDSEEEEVSAINKDGVPRHLVTDRLWVLCTEEENSRPQAALYMVPHQSCFLWYMNSSGSDPKDANVKAHDIVDVDVLGLGRQGRGGTEIVRVPNPAFEKLLVPSKVLVFRLSRDVKAGEELLYDYHVAESK 1704
            QKIHKRQRCYSADEASEVGQ+CK KIHKEGQRAA TKASE A ASAACAP S  NEVAADN AVRRRLLSRLLAIDVF P SVGDLDGLH  GI YTLA +NLSRYVSVPAGTS++CSSSPLNQRLQTALDSLS NLENHGTVLLSVP E QETNLLTDMF KAGLRVE N V+STYAG EG GGQSSIT+VAHKDGERFICNPGGR  + EGET HTPRAS PP VQRHVDAALDP +GK S RAPAEGS I  ALTTF I RYTDR DAVLTTDAAVD TVCE  L   R LVALVP FGKV+ VRQ V   E+  +CG      R+Q     PINIPDSNV RS+APRVWVSRD+              A+EVAW QPQH PHVISPEQQVAAMAAK+M LEIKASNRHGLGLFA+E MAAGDAM M CFGSFVVHDS EE VSAINKDGVPRH VT ++++LCTEEENSRP+AALYMVPHQSCFLWYMNSSGSD  DANV+AH  +DV+ L LGRQGRGGTEI+ V +PAFE+LL PSKVLVF+LSRDVKAGEELLYDYHVAESK
Sbjct:  375 QKIHKRQRCYSADEASEVGQECKVKIHKEGQRAARTKASETAAASAACAPPSTANEVAADNMAVRRRLLSRLLAIDVFCPYSVGDLDGLHSLGIRYTLAFLNLSRYVSVPAGTSVSCSSSPLNQRLQTALDSLSNNLENHGTVLLSVPGEMQETNLLTDMFNKAGLRVEGNPVISTYAGSEGRGGQSSITIVAHKDGERFICNPGGRNSNEEGETTHTPRASRPPYVQRHVDAALDPRVGKWSCRAPAEGSFISSALTTFFITRYTDRDDAVLTTDAAVDITVCEKTLYHGRSLVALVPAFGKVELVRQKVGQLEEDFKCGWPRSWLRVQR----PINIPDSNVPRSVAPRVWVSRDKXXXXXXXXXXXXXXALEVAWRQPQHVPHVISPEQQVAAMAAKEMGLEIKASNRHGLGLFAQEDMAAGDAMPMACFGSFVVHDSLEEVVSAINKDGVPRHHVTSQVYMLCTEEENSRPKAALYMVPHQSCFLWYMNSSGSDGGDANVEAHKKIDVETLSLGRQGRGGTEILHVEDPAFEELLAPSKVLVFKLSRDVKAGEELLYDYHVAESK 939          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: D7FZ30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ30_ECTSI)

HSP 1 Score: 572 bits (1473), Expect = 2.330e-197
Identity = 305/423 (72.10%), Postives = 329/423 (77.78%), Query Frame = 1
Query:  442 PAETQETNLLT-DMFKKAGLRVEENRVLSTYAGPEGSGGQSSITVVAHKDGERFICNPGGRTRDGEGET-HTPRASTPPCVQRHVDAALDPVIGKRSSRAPAEGSLIREALTTFLIKRYTDRFDAVLTTDAAVDTTVCEGALKFERKLVALVPDFGKVDSVRQNVANWEDKHRCGEGVELRRLQGGVTLPINIPDSNVRRSLAPRVWVSRDRRPVNVPHSIVPREVAVEVAWTQPQHAPHVISPEQQVAAMAAKKMELEIKASNRHGLGLFAKEAMAAGDAMSMDCFGSFVVHDSEEEEVSAINKDGVPRHLVTDRLWVLCTEEENSRPQAALYMVPHQSCFLWYMNSSGSDPKDANVKAHDIVDVDVLGLGRQGRGGTEIVRVPNPAFEKLLVPSKVLVFRLSRDVKAGEELLYDYHVAESK 1704
            P   + T  L+ DMF+KAGLRVE   ++STYAG     G+SSIT VAHKDGERFICNPGGR  D  GET HTPRAS P CVQ  VDAALDP +GK S+R PAEGS I   LTTF IKRYTDR DAVLTTDAAVDTTVCE ALK  R LVALVP+FG VDSVRQ V  WE++ R GE     R     T P NIP SNV RS+APRVW SRD  PV            VEVAW QPQHAPHVISPEQQVAAMAAK   LEIKASNRHGLGLFA+E MAAGDAM M CFGSFVVHDS EE VSA+NKDGVPRH VT ++W+LCTE ENSRPQAALYMVPH+SCFLWYMNSSGSD  DANV+AH+ +D ++L LGRQGRGGTEI  V NPAFE+LLVPSKVLVFRLSRDVKAGEE LYDYHVAESK
Sbjct:  116 PTRWRPTTWLSGDMFEKAGLRVERVPLISTYAGSSDHAGKSSITFVAHKDGERFICNPGGRESDEGGETTHTPRASRPTCVQPPVDAALDPQVGKWSTRRPAEGSFISSPLTTFFIKRYTDRDDAVLTTDAAVDTTVCEQALKHGRTLVALVPNFGTVDSVRQKVRKWEEEFRSGEPRPWVR----ETRP-NIPHSNVPRSVAPRVWASRDTHPVXXXXXXXXXXXXVEVAWRQPQHAPHVISPEQQVAAMAAKDQGLEIKASNRHGLGLFAQEDMAAGDAMPMACFGSFVVHDSVEEVVSAMNKDGVPRHHVTSKVWLLCTEYENSRPQAALYMVPHRSCFLWYMNSSGSDGGDANVEAHEQIDAELLSLGRQGRGGTEIRHVQNPAFEELLVPSKVLVFRLSRDVKAGEERLYDYHVAESK 533          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: A0A6H5JET7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET7_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 2.040e-108
Identity = 184/234 (78.63%), Postives = 197/234 (84.19%), Query Frame = 1
Query:   91 QRAATTKASEAAGASAACAPASATNEVAADNKAVRRRLLSRLLAIDVFRPDSVGDLDGLHPAGITYTLASVNLSRYVSVPAGTSITCSSSPLNQRLQTALDSLSKNLENHGTVLLSVPAETQETNLLTDMFKKAGLRVEENRVLSTYAGPEGSGGQSSITVVAHKDGERFICNPGGRTRDGEGET-HTPRASTPPCVQRHVDAALDPVIGKRSSRAPAEGSLIREALTTFLIKR 789
            Q AATTKASEA+  SAACAPA+A NEVA  N AVRR+LLSRL+AIDVF P SVGDLDGLHPAGI YTLA +NLS++VS+PAGTSI+CSSSPLNQRLQTALDSLSKNLENHGTVLLSVP E QET LLTDMFKKAGLRVE   V+STYAG     G+SSITVVAHKDGERFICNPGGR  D EGET HTPRAS P CVQ HVDAALDP +GK S+R PAEGS I   LTTF IKR
Sbjct:   62 QLAATTKASEASAVSAACAPATAANEVAPANMAVRRQLLSRLVAIDVFCPHSVGDLDGLHPAGIRYTLAFLNLSQFVSIPAGTSISCSSSPLNQRLQTALDSLSKNLENHGTVLLSVPVEVQETFLLTDMFKKAGLRVEGVPVISTYAGSSDHAGKSSITVVAHKDGERFICNPGGRESDEEGETTHTPRASRPTCVQPHVDAALDPQVGKWSTRRPAEGSFISGPLTTFFIKR 295          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: A0A6H5KBC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC1_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 7.850e-102
Identity = 214/417 (51.32%), Postives = 259/417 (62.11%), Query Frame = 1
Query:  238 PDSVGDLDGLHPAGITYTLASVNLSRYVS-VPAGTSITCSSSPLNQRLQTALDSLSKNLENHGTVLLSVPAETQETN---LLTDMFKKAGLRVEENRVLSTYAGPEGSGGQ-SSITVVAHKDGERFICNPGGRTRDGEGET-HTPRASTPPCVQRHVDAALDPVIGKRSSRAPAEGSLIREALTTFLIKRYTDRFDAVLTTDAAVDTTVCEGALKFERKLVALVPDFGKVDSVRQNVANWEDKHRCGEGVELRRLQGGVTLPINIPDSNVRRSLAPRVWVSRDRRPVNVPHSIVPREVAVEVAWTQPQHAPHVISPEQQVAAMAAKKMELEIKASNRHGLGLFAKEA-MAAGDAMSMDCFGSFVVHDSEEEEVSAINKDGVPRHLVTDR-LWVLCTEEENSRPQAALYMVPHQSCFL 1464
            P SVGDLD    AG+ Y +A +N S  VS +P  + IT  S  L QRLQTA+  +S  L+N GT++LSVP     T+    + D+F  AGL +E   V S   G   +G + SS+T VAHK+GERFICN     R+ EGE+  TP AS P  VQ H  A LD  +GK + + P  GS I   LT     R++DR D VLTTDAA DTTVC  AL+  R LVALVPD G V  VRQ +   ED  RC                         RS +PRV VS+D RP+NVPHS VPR VAV+VA  +P+H    +SPEQQVAA+A +KM LEIK+SNRHGLGLFAKE  MAAGDA  M CFGS+VV+DS  E VS +NKD  PRH V    + +LCTEEE+ RPQA L+MVPH+SCFL
Sbjct:  221 PSSVGDLDVQQLAGMNYMVAFINFSELVSGIPVTSFIT--SPTLKQRLQTAVGLVSTTLDNKGTMVLSVPFAALGTDGPAAMNDIFTSAGLGLESVPVASFLYGSRNTGERHSSMTFVAHKNGERFICNVRDTDREAEGESIRTPGASRPIHVQSHDPAGLDARVGKFARQKPEGGSFISGGLT-----RFSDRRDGVLTTDAAGDTTVCRKALELGRTLVALVPDLGTVGFVRQELGRLED--RC-------------------------RSESPRVMVSKDTRPINVPHSNVPRSVAVQVASREPRHG---MSPEQQVAAIATEKMGLEIKSSNRHGLGLFAKEDDMAAGDATRMACFGSYVVYDSLVEVVSDMNKDDAPRHYVVGGDVQMLCTEEESCRPQATLFMVPHKSCFL 600          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: D7G605_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G605_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 9.450e-96
Identity = 171/206 (83.01%), Postives = 177/206 (85.92%), Query Frame = 1
Query:    1 QKIHKRQRCYSADEASEVGQQCKEKIHKEGQRAATTKASEAAGASAACAPASATNEVAADNKAVRRRLLSRLLAIDVFRPDSVGDLDGLHPAGITYTLASVNLSRYVSVPAGTSITCSSSPLNQRLQTALDSLSKNLENHGTVLLSVPAETQETNLLTDMFKKAGLRVEENRVLSTYAGPEGSGGQSSITVVAHKDGERFICNPGG 618
            QKIHKRQRCYSADEASEVGQ+CK KIHKEGQRAA TKASE A ASAACAP S  NEVAADN A RRRLLSRLLAIDVF P SVGDLDGLH  GI YTLA +NLSRYVSVPAGTS++CSSSPLNQRLQTALDSLS NLENHGTVLLSVP E QETNLLTDMF KAGLRVE N V+STYAG EG GGQSSIT+VAHKDG      PGG
Sbjct:  375 QKIHKRQRCYSADEASEVGQECKVKIHKEGQRAARTKASETAAASAACAPPSTANEVAADNMAERRRLLSRLLAIDVFCPYSVGDLDGLHSLGIRYTLAFLNLSRYVSVPAGTSVSCSSSPLNQRLQTALDSLSNNLENHGTVLLSVPGEMQETNLLTDMFNKAGLRVEGNPVISTYAGSEGRGGQSSITIVAHKDGGEVHLQPGG 580          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: A0A6H5KX16_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX16_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 3.430e-82
Identity = 151/223 (67.71%), Postives = 162/223 (72.65%), Query Frame = 1
Query: 1117 VEVAWTQPQHAPHVISPEQQVAAMAAKKMELEIK---------------------------ASNRHGLGLFAKEAMAAGDAMSMDCFGSFVVHDSEEEEVSAINKDGVPRHLVTDRLWVLCTEEENSRPQAALYMVPHQSCFLWYMNSSGSDPKDANVKAHDIVDVDVLGLGRQGRGGTEIVRVPNPAFEKLLVPSKVLVFRLSRDVKAGEELLYDYHVAESK 1704
            VEVA  QPQHAP VISPEQQVAAMAAK+M LEIK                           ASNRHGLGLFA+E MAAGD M M CFGSFVVHDS EE VSAINKDG+PRH VT  +W+LCTE+ENSRPQAALYMVPHQSCFLWY+NSSGSD  DANV+ H+ +D + L LGRQGRG              LLVPSKVLVFRLSRDVKAGEELLYDYHVAESK
Sbjct:  429 VEVASRQPQHAPQVISPEQQVAAMAAKEMGLEIKVGTKLVLFMSLQLTPDPSVALFACAPQASNRHGLGLFAQEDMAAGDVMPMACFGSFVVHDSVEEVVSAINKDGIPRHHVTSNVWLLCTEDENSRPQAALYMVPHQSCFLWYINSSGSDGGDANVETHEQIDAEFLSLGRQGRGA-------------LLVPSKVLVFRLSRDVKAGEELLYDYHVAESK 638          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: A0A6H5JMQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ3_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 6.360e-74
Identity = 116/142 (81.69%), Postives = 126/142 (88.73%), Query Frame = 1
Query: 1279 MSMDCFGSFVVHDSEEEEVSAINKDGVPRHLVTDRLWVLCTEEENSRPQAALYMVPHQSCFLWYMNSSGSDPKDANVKAHDIVDVDVLGLGRQGRGGTEIVRVPNPAFEKLLVPSKVLVFRLSRDVKAGEELLYDYHVAESK 1704
            M M CFGSFVVHDS EE VSAINKDGVPRH VT ++W+LCTE+ENSRPQAALYMVPHQSCFLWYMNSSGSD  DANV+AH+ +D + L LGRQGRGGT+I  V NPAFE+LLV SKVLVFRLSRDVKAGEELLYDYHVAESK
Sbjct:    1 MPMACFGSFVVHDSVEEVVSAINKDGVPRHHVTSKVWLLCTEDENSRPQAALYMVPHQSCFLWYMNSSGSDAGDANVEAHEQIDAEFLSLGRQGRGGTKIRHVQNPAFEELLVSSKVLVFRLSRDVKAGEELLYDYHVAESK 142          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: A0A6H5JG75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG75_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.340e-35
Identity = 84/150 (56.00%), Postives = 92/150 (61.33%), Query Frame = 1
Query:  781 IKRYTDRFDAVLTTDAAVDTTVCEGALKFERKLVALVPDFGKVDSVRQNVANWEDKHRCGEGVELRRLQGGVTLPINIPDSNVRRSLAPRVWVSRDRRPVNVPHSIVPREVAVE----VAWTQPQHAPHVISPEQQVAAMAAKKMELEIK 1218
            I RYTDR DAVLTTDAAVDTTVCE ALK  R LVALVPDFG VDSVRQ V  WE++ R GE                            R W +R+ RP+N+PHS VPR         VA  QPQHAPH ISPEQ+VAAMAA +M LEIK
Sbjct:    8 IARYTDRDDAVLTTDAAVDTTVCEQALKHGRTLVALVPDFGTVDSVRQKVGKWEEEFRSGER---------------------------RPW-ARETRPINIPHSNVPRNXXXXXXXXVASRQPQHAPHAISPEQEVAAMAANEMGLEIK 129          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: D8LKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD6_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 4.940e-19
Identity = 142/528 (26.89%), Postives = 218/528 (41.29%), Query Frame = 1
Query:  196 RRLLSRLLAIDVFRPDSVGDLDGLHPAGITYTLASVNLSRYVSVPAGTSITCSSSPLNQRLQTALDSLSKNLENHGTVLLSVPAETQ-ETNLLTDMFKKAGLRVEENRVLSTYAGPEGSGG------------QSSITVVAHKDGERFICN--PGGRTRDGEGETHTPRASTPPCVQRHVDAALDPVIGKRSSRAPAEGSLIREALTTFLIKRYTDRFDAVLTTDAAVDTTVCEGALKFERKLVALVPDFGKVDSVRQNVAN---WEDKHRCGEGVELRR---LQGGVTLPINIPDSNVRRSLAPRVWVSRDRRPVNVPHSIVPREVAVEVAWTQPQHAPHVISPEQQVAAMAAKKMELEIKASNRHGLGLFAKEAMAAGDAMSMDCFGSFVVHDSEEEEVSAINKDGVPRHLVT--DRLWVLCTEEENSRPQAALYMVPHQSCFLWYMNSSGSDPKDANVKAHDIVDVDVLGLGRQGRGGTEIVRVPNPAFEKLLVPSKVLVFRLSRDVKAGEELLYDYHVAESKEG 1710
            R+ ++ + ++D+F  D       L     +  L  VNL    S+  GT          +RL   L +L   L   GTV++++ +    +   +    K A L +E+N V+S Y   EG  G            Q    +VAHK  + F C+  P G+ R   G   +    +P        A+ + V    S + P+  + +  +    LI R+T   D VL T    +  +    L   R L ALV D  K ++    V        KH  G   EL +   +  G TLP  IP SN+    A +    R                    A    +     +     VA   A  MELEIK S+ HGLGLFA + +  G  + M   G++ +  + +E ++ +N DG PR+ V   D L  L  ++E  R  + L++ P +   L+Y+NSS  D       AH      +  L R+ +         + A + L+  +K + FR+SR V+AGEELL  Y VA    G
Sbjct:   43 RKEVTTVQSVDIFSSDFDSTTRPLEVDRDSAMLVFVNLGADPSLLDGTD------EATERLHAGLVALESVLHPRGTVVIAMGSIANFDFPCMEARLKAADLAMEKNPVVSIYL--EGQPGRIPERLKNHLTTQGCSVLVAHKTND-FACHGHPLGKRRAARGAASSASFKSP------RQASFEAVGFVVSDKHPSTATFLSTSTADHLINRFTVPGDCVLVTTFE-ENPLASLVLGQGRHLGALVADSTKAENAEVEVNEACVTATKH--GWFAELNKTEVIMTGSTLPSCIPSSNLSAHAAKQYESQR--------------------ATDDEEDTDGDVLSALDVARELAGAMELEIKDSS-HGLGLFATKDIEFGGGVPMTAMGAYEIL-TLDEMIAEVNSDGDPRYPVLEYDNLVALLGDDEIVREGSKLWLRPTRESPLFYVNSSFPD-------AH------LQNLLRESKLNENPPASADEAKKVLVEAAKGVSFRVSRTVRAGEELLIHYPVAPENSG 517          
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Match: A0A6H5JPN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN5_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.260e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 1
Query:    1 QKIHKRQRCYSADEASEVGQQCKEKIHKEGQRAATTKASEA 123
            QKIHKRQRCYSADEASEVGQQCKEKIHKEGQRAATTKAS+A
Sbjct:  127 QKIHKRQRCYSADEASEVGQQCKEKIHKEGQRAATTKASDA 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16680.4789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G077_ECTSI2.560e-29277.86Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FZ30_ECTSI2.330e-19772.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JET7_9PHAE2.040e-10878.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBC1_9PHAE7.850e-10251.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G605_ECTSI9.450e-9683.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX16_9PHAE3.430e-8267.71SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JMQ3_9PHAE6.360e-7481.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG75_9PHAE2.340e-3556.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKD6_ECTSI4.940e-1926.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPN5_9PHAE1.260e-1297.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16680contigEcto-sp13_S_contig16680:1214..3855 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1713
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-00_005030.3
Cds size1713
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462874.7589912-CDS-Ecto-sp13_S_contig16680:1213..17081681462874.7589912-CDS-Ecto-sp13_S_contig16680:1213..1708Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16680 1214..1708 -
1681462874.7702906-CDS-Ecto-sp13_S_contig16680:1861..22911681462874.7702906-CDS-Ecto-sp13_S_contig16680:1861..2291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16680 1862..2291 -
1681462874.7787051-CDS-Ecto-sp13_S_contig16680:2629..29421681462874.7787051-CDS-Ecto-sp13_S_contig16680:2629..2942Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16680 2630..2942 -
1681462874.7868013-CDS-Ecto-sp13_S_contig16680:3168..34461681462874.7868013-CDS-Ecto-sp13_S_contig16680:3168..3446Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16680 3169..3446 -
1681462874.7948048-CDS-Ecto-sp13_S_contig16680:3658..38551681462874.7948048-CDS-Ecto-sp13_S_contig16680:3658..3855Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16680 3659..3855 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16680.4789.1prot_Ecto-sp13_S_contig16680.4789.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16680 1214..3855 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16680.4789.1

>prot_Ecto-sp13_S_contig16680.4789.1 ID=prot_Ecto-sp13_S_contig16680.4789.1|Name=mRNA_Ecto-sp13_S_contig16680.4789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=571bp
QKIHKRQRCYSADEASEVGQQCKEKIHKEGQRAATTKASEAAGASAACAP
ASATNEVAADNKAVRRRLLSRLLAIDVFRPDSVGDLDGLHPAGITYTLAS
VNLSRYVSVPAGTSITCSSSPLNQRLQTALDSLSKNLENHGTVLLSVPAE
TQETNLLTDMFKKAGLRVEENRVLSTYAGPEGSGGQSSITVVAHKDGERF
ICNPGGRTRDGEGETHTPRASTPPCVQRHVDAALDPVIGKRSSRAPAEGS
LIREALTTFLIKRYTDRFDAVLTTDAAVDTTVCEGALKFERKLVALVPDF
GKVDSVRQNVANWEDKHRCGEGVELRRLQGGVTLPINIPDSNVRRSLAPR
VWVSRDRRPVNVPHSIVPREVAVEVAWTQPQHAPHVISPEQQVAAMAAKK
MELEIKASNRHGLGLFAKEAMAAGDAMSMDCFGSFVVHDSEEEEVSAINK
DGVPRHLVTDRLWVLCTEEENSRPQAALYMVPHQSCFLWYMNSSGSDPKD
ANVKAHDIVDVDVLGLGRQGRGGTEIVRVPNPAFEKLLVPSKVLVFRLSR
DVKAGEELLYDYHVAESKEG*
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mRNA from alignment at Ecto-sp13_S_contig16680:1214..3855-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16680.4789.1 ID=mRNA_Ecto-sp13_S_contig16680.4789.1|Name=mRNA_Ecto-sp13_S_contig16680.4789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2642bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16680:1214..3855- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAAGATTCACAAGCGCCAACGCTGCTACTCCGCGGATGAAGCGTCGGA GGTCGGACAGCAGTGCAAGGAGAAGATTCACAAGGAGGGTCAACGCGCAG CCACGACGAAGGCATCAGAGGCTGCCGGTGCTTCCGCTGCTTGTGCGCCG GCATCGGCAACCAACGAGGTGGCGGCCGACAACAAGGCTGTAAGGAGGTG AGATAAATAGTGTATGCCCTCGTGCGTGCGATGTGCCGTCTGCAAATTGT TGGCCATGATTTTGGGTTTAGAGCGATACCTGCGAGCAGCTGGCCGGTGA CACCAGTTTCCTTGCGAATTGATGGACGAAATTTATTCCCGAACACCACT AGGATAACGACCTGTCGTCTACCCACCACGACGCCATATTCCTTGACCAA CGTCCACAGGCGGCTGTTGTCGAGGCTCCTTGCGATCGACGTATTCCGCC CAGATTCCGTTGGGGATCTGGATGGATTGCATCCGGCGGGCATTACGTAC ACGCTGGCGTCCGTCAACCTCTCCCGGTATGTCAGCGTTCCGGCCGGGAC TTCCATCACCTGTTCGTCGTCTCCCCTGAACCAACGTCTACAGACCGCCC TCGACTCTCTCTCGAAGAACTTGGAAAATCACGGCACCGTGTTGCTGTCT GTACCTGCCGAGACGCAGGAAACCAACCTTCTGACAGGTGCGCGTGGACA GTTTTTTGGGGCGCGGTCACACGTAGAGCGTTCCATGGCCTGCAACGTGA TTATATGGTCGCGAAATTCCGTATAGCTCGGGCATTCACCGTTATCCTTA CCTGCCACGCTGTTGTGTTGTCGGCTTCCTAAAAGTAGGAGGAATACGGT GTGCCTGACGTTAAGACCCTCGTCCTTCCTCTTCCCTCTCACGCACACGA TGATTCCCGAAAGACATGTTCAAAAAAGCGGGTCTTCGGGTAGAGGAGAA TCGAGTCCTATCAACGTACGCTGGGCCTGAGGGCAGCGGAGGCCAGAGTT CCATCACCGTCGTCGCGCACAAGGATGGGGAGAGGTTCATTTGCAACCCG GGGGGTCGGACGAGGGATGGGGAGGGCGAGACACACACACCTCGGGCATC GACGCCACCCTGTGTCCAGCGGCATGTGGACGCTGCGTTAGACCCGGTAA TAGGGAAGCGGTCTAGTCGAGCACCCGCCGAAGGGTCTCTCATCAGGGAA GCCCTGACCACGTTCTTAATTAAACGGTAATAGAGTGATCGTGCCGGTTT TTTTTTTTGTAGTGTCGTAAAAAGGGGGTGCAAATGATGGGCCTTTTCCG TTTCCTGAGTTGCTGTGAATCCTCCGTTGTATGGAAGGTTAGGATGTCTT GCGCATACCATTAACGAGAAGTCCCACTCGAGACGTCATCCTAAATGTAC CCTAAATGTATATGGCTCTGTGTTTTGTTTCGTGTGCGACGGTCGTCGCT TGCTTTGCACGCACCCATATCTGAGTTGCATTTCCCCCACTCTGACGTGA CACACCGACCAAGCACACCTTTATTCTCCCCTTCGATGCGTCACCATGCC GAACCCATCGCCAGATATACCGACCGATTCGATGCGGTGCTCACAACTGA TGCAGCCGTAGACACCACAGTTTGCGAAGGGGCGCTCAAGTTCGAACGTA AGCTGGTGGCATTAGTCCCCGACTTCGGTAAGGTGGACTCGGTGAGGCAG AACGTTGCGAACTGGGAGGACAAACATAGGTGTGGAGAGGGTGTAGAGCT TCGACGCCTCCAGGGTGGGGTTACACTCCCCATCAACATCCCTGACAGCA ACGTGCGACGGTCGTTGGCGCCTCGGGTCTGGGTTTCGAGGGACCGTCGT CCCGTGAACGTCCCTCACAGCATCGTGCCACGGGAGGTGGCGGTTGAAGT GGCCTGGACGCAACCCCAACACGCACCGCATGTGATCTCCCCTGAACAGC AGGTCGCCGCCATGGCCGCCAAGAAGATGGAACTCGAAATAAAGGTGCGA AATTGGTGTTCTCGTGTGGATCGTGAACAACTTAAAAAAAATAATAATCC ACAATTAATTCCTGAAGCAGGTAGTTACAACATTGGTTCTCTTGATCATC CTACACCTCCCGACCCCTCCGTTGCCTTGTTTGCGTGCACCCGGCAGGCA TCCAATCGTCACGGACTCGGTTTGTTTGCCAAGGAGGCCATGGCTGCAGG AGACGCCATGTCTATGGACTGTTTCGGGTCTTTCGTAGTGCATGATTCTG AAGAAGAGGAAGTGTCTGCCATCAACAAGGACGGTGTCCCTCGCCACCTC GTGACTGATAGACTGTGGGTGCTGTGCACAGAGGAGGAGAACAGTCGTCC ACAGGCCGCGCTGTACATGGTGCCTCACCAGTCTTGCTTCTTGTGGTACA TGAACTCAAGCGGCTCGGACCCAAAAGATGCGAACGTGAAGGCACACGAC ATAGTTGATGTTGATGTGCTCGGCCTGGGGAGGCAGGGCCGGGGCGGTAC AGAGATTGTACGCGTGCCAAATCCTGCCTTTGAGAAGCTGCTCGTGCCAT CTAAAGTGCTTGTGTTTAGGCTTTCTAGAGATGTCAAGGCGGGAGAAGAA CTTCTGTACGACTACCATGTGGCGGAGTCGAAGGAAGGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16680:1214..3855-

>mRNA_Ecto-sp13_S_contig16680.4789.1 ID=mRNA_Ecto-sp13_S_contig16680.4789.1|Name=mRNA_Ecto-sp13_S_contig16680.4789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1713bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16680:1214..3855- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAAGATTCACAAGCGCCAACGCTGCTACTCCGCGGATGAAGCGTCGGA
GGTCGGACAGCAGTGCAAGGAGAAGATTCACAAGGAGGGTCAACGCGCAG
CCACGACGAAGGCATCAGAGGCTGCCGGTGCTTCCGCTGCTTGTGCGCCG
GCATCGGCAACCAACGAGGTGGCGGCCGACAACAAGGCTGTAAGGAGGCG
GCTGTTGTCGAGGCTCCTTGCGATCGACGTATTCCGCCCAGATTCCGTTG
GGGATCTGGATGGATTGCATCCGGCGGGCATTACGTACACGCTGGCGTCC
GTCAACCTCTCCCGGTATGTCAGCGTTCCGGCCGGGACTTCCATCACCTG
TTCGTCGTCTCCCCTGAACCAACGTCTACAGACCGCCCTCGACTCTCTCT
CGAAGAACTTGGAAAATCACGGCACCGTGTTGCTGTCTGTACCTGCCGAG
ACGCAGGAAACCAACCTTCTGACAGACATGTTCAAAAAAGCGGGTCTTCG
GGTAGAGGAGAATCGAGTCCTATCAACGTACGCTGGGCCTGAGGGCAGCG
GAGGCCAGAGTTCCATCACCGTCGTCGCGCACAAGGATGGGGAGAGGTTC
ATTTGCAACCCGGGGGGTCGGACGAGGGATGGGGAGGGCGAGACACACAC
ACCTCGGGCATCGACGCCACCCTGTGTCCAGCGGCATGTGGACGCTGCGT
TAGACCCGGTAATAGGGAAGCGGTCTAGTCGAGCACCCGCCGAAGGGTCT
CTCATCAGGGAAGCCCTGACCACGTTCTTAATTAAACGATATACCGACCG
ATTCGATGCGGTGCTCACAACTGATGCAGCCGTAGACACCACAGTTTGCG
AAGGGGCGCTCAAGTTCGAACGTAAGCTGGTGGCATTAGTCCCCGACTTC
GGTAAGGTGGACTCGGTGAGGCAGAACGTTGCGAACTGGGAGGACAAACA
TAGGTGTGGAGAGGGTGTAGAGCTTCGACGCCTCCAGGGTGGGGTTACAC
TCCCCATCAACATCCCTGACAGCAACGTGCGACGGTCGTTGGCGCCTCGG
GTCTGGGTTTCGAGGGACCGTCGTCCCGTGAACGTCCCTCACAGCATCGT
GCCACGGGAGGTGGCGGTTGAAGTGGCCTGGACGCAACCCCAACACGCAC
CGCATGTGATCTCCCCTGAACAGCAGGTCGCCGCCATGGCCGCCAAGAAG
ATGGAACTCGAAATAAAGGCATCCAATCGTCACGGACTCGGTTTGTTTGC
CAAGGAGGCCATGGCTGCAGGAGACGCCATGTCTATGGACTGTTTCGGGT
CTTTCGTAGTGCATGATTCTGAAGAAGAGGAAGTGTCTGCCATCAACAAG
GACGGTGTCCCTCGCCACCTCGTGACTGATAGACTGTGGGTGCTGTGCAC
AGAGGAGGAGAACAGTCGTCCACAGGCCGCGCTGTACATGGTGCCTCACC
AGTCTTGCTTCTTGTGGTACATGAACTCAAGCGGCTCGGACCCAAAAGAT
GCGAACGTGAAGGCACACGACATAGTTGATGTTGATGTGCTCGGCCTGGG
GAGGCAGGGCCGGGGCGGTACAGAGATTGTACGCGTGCCAAATCCTGCCT
TTGAGAAGCTGCTCGTGCCATCTAAAGTGCTTGTGTTTAGGCTTTCTAGA
GATGTCAAGGCGGGAGAAGAACTTCTGTACGACTACCATGTGGCGGAGTC
GAAGGAAGGGTAG
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