mRNA_Ecto-sp13_S_contig16667.4778.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16667.4778.1
Unique NamemRNA_Ecto-sp13_S_contig16667.4778.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: A0A6H5JBY2_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBY2_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 1.290e-199
Identity = 283/310 (91.29%), Postives = 292/310 (94.19%), Query Frame = 1
Query:    1 LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSKVDEPQGDLIRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVTAGVIKSLPRRASNAALNVAHEAQGRRPKSVLALTMAAVCALAAVMLAYFVCGVHGTPPILGGEGMFNPPEGLANWAKVIEKIQELEDWDRILAA-DSGEEHLDVLIDVLMKYYKNAELRNKAQ 927
            LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMK FKAAIVDLAAQDNELKFFQFSE SWNECLT LGFTVTPSWLGERQPPPYAVISSKVDEP G L RNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQD+KDEMTARYRAFV++QTR +TEVT GVIK LPRRAS AALNVAHEAQGRRPKSVLALTMA VCALAAVMLAY  CGVHGTPPILG  GM+NP EGLANWAKVIEK+QELE WDRILAA DSGEEHLDVLIDVL+++YKNAELRNKAQ
Sbjct:  143 LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKDFKAAIVDLAAQDNELKFFQFSEMSWNECLTALGFTVTPSWLGERQPPPYAVISSKVDEPHGGLFRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDIKDEMTARYRAFVKEQTRPMTEVTVGVIKCLPRRASKAALNVAHEAQGRRPKSVLALTMATVCALAAVMLAYLCCGVHGTPPILGRGGMYNPAEGLANWAKVIEKMQELEGWDRILAAPDSGEEHLDVLIDVLVEHYKNAELRNKAQ 452          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: D8LDE4_ECTSI (Sept1, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE4_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 1.650e-182
Identity = 260/301 (86.38%), Postives = 279/301 (92.69%), Query Frame = 1
Query:    1 LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSKVDEPQGDLIRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVTAGVIKSLPRRASNAALNVAHEAQGRRPKSVLALTMAAVCALAAVMLAYFVCGVHGTPPILGGEGMFNPPEGLANWAKVIEKIQELEDWDRILAA-DSGEEHLDVLIDVLMKYYK 900
            LAEVR+GNETP++DGRTDVCIYFIAAHRCKPIDIEYMKQL+KAVAVIPVIGKSDSMTVDEMK FK  IVDLAAQDNEL+FFQFS+TSWNECLTTLGFT TP WLGERQPPPYAVISSKVDEP G LIRNPARRYPWGTCRVMETTHS+NTYLQCLLLEVGFQD+KDEM ARY+AFV++QTR ITEVT GVIKSLPRRAS AALNV HEA+GRRPKSVLALTMAAVCA+ AVMLAY +CGV G PPILGG GM NPPEGLA+WAKVIEKIQELE W+RILAA +SG EHLDVLIDVL++ YK
Sbjct:  140 LAEVRKGNETPKEDGRTDVCIYFIAAHRCKPIDIEYMKQLTKAVAVIPVIGKSDSMTVDEMKDFKTGIVDLAAQDNELEFFQFSDTSWNECLTTLGFTATPDWLGERQPPPYAVISSKVDEPHGGLIRNPARRYPWGTCRVMETTHSDNTYLQCLLLEVGFQDMKDEMKARYKAFVKEQTRPITEVTVGVIKSLPRRASYAALNVVHEAEGRRPKSVLALTMAAVCAMVAVMLAYLLCGVSGAPPILGG-GMHNPPEGLADWAKVIEKIQELEGWERILAAVNSGGEHLDVLIDVLIEDYK 439          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: D7FUI7_ECTSI (Sept3, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI7_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 6.270e-160
Identity = 241/310 (77.74%), Postives = 259/310 (83.55%), Query Frame = 1
Query:    1 LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSKVDEPQGDLIRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVTAGVIKSLPRRASNAALNVAHEAQGRRPKSVLALTMAAVCALAAVMLAYFVCGVHGTPPILGGEGMFNPPEGLANWAKVIEKIQELEDWDRILAA-DSGEEHLDVLIDVLMKYYKNAELRNKAQ 927
            L EV +GNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMK FK AIVDLAAQD++LKFFQFSETSWNEC   LG T  P+WLGERQPPPYAVISSKVDE     IR+PARRYPWGTC VMET HS+NTYLQCLLLEVGFQD+K EM  RY+AFV++QTR  TEVT   IK LPR        VAH+ QGR  KSVL L  A VCAL AV+LA+  CGV+GTPPI GG GM+NPPE LANWAKVIEKIQ+LE WDRILAA DSGEEHL +LIDVLM+YYKN ELRNKAQ
Sbjct:  150 LEEVMKGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKEFKTAIVDLAAQDDQLKFFQFSETSWNECKGALGPTDPPNWLGERQPPPYAVISSKVDESHRG-IRSPARRYPWGTCHVMETAHSDNTYLQCLLLEVGFQDMKKEMKTRYKAFVKEQTRPTTEVTVDAIKRLPRW-------VAHKVQGRGRKSVLVLISAVVCALVAVVLAHLRCGVNGTPPIEGG-GMYNPPESLANWAKVIEKIQKLEGWDRILAAADSGEEHLAILIDVLMEYYKNTELRNKAQ 450          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: D7FUI5_ECTSI (Sept5, septin GTPase, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI5_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 6.490e-96
Identity = 170/298 (57.05%), Postives = 204/298 (68.46%), Query Frame = 1
Query:    1 LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSKVDEPQGDL-IRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVTAGVIKSLPRRASNAALNVAHEAQGRRPKSVLALTMAAVCALAAVMLAYFVCGVHGTPPILGGEGMFNPPEGLANWAKVIEKIQELEDWDRILAA-DSGEEHLDVLIDVLM 888
            L EV  GN+TP +DGRTDVCIYFIAAHRCKPIDIEYMKQLSK VAVIPV+GKSDSMTVDEM  FK AIVD AAQ N ++FF FSE +W +CL  L     P WLGER+PPPYAVISS+VD+P G+    +P RRYPWG C VM   HS+NTYLQCLLLEVGFQD+KDEM  RY AF  ++ + +  V    I+              H     +P S+L + +A +CA+ AV+LA+    VH    + G E    P  GLA+W++VI KIQ+LE  DRIL A D GEE L VL++VLM
Sbjct:   91 LTEVMGGNDTPSEDGRTDVCIYFIAAHRCKPIDIEYMKQLSKVVAVIPVVGKSDSMTVDEMIGFKKAIVDSAAQANGVEFFNFSERAWGKCLGALNIADEPIWLGERRPPPYAVISSQVDDPNGNAHAPDPVRRYPWGDCHVMRPEHSDNTYLQCLLLEVGFQDMKDEMRKRYEAFKTEEAKPLVIVIGEKIREYR-----------HPIASGKP-SILFVVLAVICAIVAVILAH--TQVHKGYCVNGNE----PSTGLADWSEVILKIQQLEGSDRILTAIDPGEEPLYVLMEVLM 370          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: D8LDE5_ECTSI (Sept2, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE5_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 6.700e-90
Identity = 164/299 (54.85%), Postives = 205/299 (68.56%), Query Frame = 1
Query:    1 LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIP-VIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSKVDEPQGDL-IRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVTAGVIKSLPRRASNAALNVAHEAQGRRPKSVLALTMAAVCALAAVMLAYFVCGVHGTPPILGGEGMFNPPEGLANWAKVIEKIQELEDWDRILAA-DSGEEHLDVLIDVLM 888
            LAE++RGN+TP +DGRTDVCI+FIAAHRCK IDIEYMKQLSK VA+IP VIGKSDSMTVDEM  FK AI D AA+ N L+FF FSE +W +CL  L     P WLGER+PPPYAVISS+VD+P G+    +P RRYPWG C VM   HS+NTYLQCLLLEVGFQD+KD+M  RY AF +++ + +  VT    K+   R + A+          +P ++L + +A + A  AV+LA     VH    + G E    P  GLA+W ++I KIQ++E  DRI+   DS EE LDVL+ VLM
Sbjct:  138 LAEIKRGNDTPSEDGRTDVCIHFIAAHRCKSIDIEYMKQLSKVVAMIPPVIGKSDSMTVDEMFDFKKAIADSAAKANGLEFFTFSERAWEKCLAALNIADEPIWLGERRPPPYAVISSQVDDPNGNAHAHDPVRRYPWGECHVMRPEHSDNTYLQCLLLEVGFQDMKDKMRKRYEAFKKQEAKPL--VTRVGEKNREYRLAIAS---------GKPSTIL-VVLAVIFAFVAVILA--ATQVHA---VNGNE----PSTGLADWRELILKIQQVEGSDRIVTTVDSEEETLDVLMKVLM 415          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: A0A6H5JEJ7_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ7_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 3.000e-89
Identity = 157/298 (52.68%), Postives = 202/298 (67.79%), Query Frame = 1
Query:    1 LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSKVDEPQGDL-IRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVTAGVIKSLPRRASNAALNVAHEAQGRRPKSVLALTMAAVCALAAVMLAYFVCGVHGTPPILGGEGMFNPPEGLANWAKVIEKIQELEDWDRILAA-DSGEEHLDVLIDVLM 888
            LAE++ GN+TP +DGR DVC+YFIAAHRCKPID+EY+KQLSK VAVIPVIGKSDSMTVDEM  FK AI D AAQ N L+FF FSE +W +CL  L     P WLGER+PPPYAVISS+VD+P G     +P RRYPWG C VM   HS+NTYLQCLLLEVGFQD+KDEM  RY AF +++ + +       +  +  +     L +A      +P S++++ +A +    AV+LA     ++             P  GLA+W++VI KIQ+++  DR++ A DSGEE LDVL++VLM
Sbjct:   84 LAEIKMGNDTPSEDGRADVCLYFIAAHRCKPIDMEYIKQLSKVVAVIPVIGKSDSMTVDEMIDFKKAIADSAAQANGLEFFNFSERAWEKCLAALNIADEPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRRYPWGECHVMRPEHSDNTYLQCLLLEVGFQDMKDEMKKRYEAFKKQEAKLL-------VTRIGEKIWEYRLAIA----SGKP-SIISVVLALIFTFVAVILATTEVNLN------------EPSTGLADWSEVILKIQQVKGSDRVVTAVDSGEETLDVLMEVLM 357          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: I2CR08_NANGC (Sporulation-regulated protein 3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR08_NANGC)

HSP 1 Score: 118 bits (296), Expect = 2.320e-26
Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = 1
Query:   40 DGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISS-KVDEPQGDLIRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAF 525
            D R DVC+YF+AAHR K IDI++M+ +S  +A+IP++ K+DSMT +E   F++ + + A Q + ++ F F     +E    +G         +   PP+AV++S + DE +G     P R Y WGTC    T HS+ TYL+ LLLE GF DL+     RY A+
Sbjct:  318 DARVDVCLYFLAAHRLKWIDIKFMQAISAKIALIPLLAKADSMTAEETLAFRSFVFE-ACQHHAIRLFDFG----SEAKRRVGIPT------DLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAY 469          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: A0A4D9CXY9_9STRA (Septin-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXY9_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.610e-26
Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = 1
Query:   40 DGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISS-KVDEPQGDLIRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAF 525
            D R DVC+YF+AAHR K IDI++M+ +S  +A+IP++ K+DSMT +E   F++ + + A Q + ++ F F     +E    +G         +   PP+AV++S + DE +G     P R Y WGTC    T HS+ TYL+ LLLE GF DL+     RY A+
Sbjct:  302 DARVDVCLYFLAAHRLKWIDIKFMQAISAKIALIPLLAKADSMTAEETLAFRSFVFE-ACQHHAIRLFDFG----SEAKRRVGIPT------DLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAY 453          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: A0A8J9WRU9_9CHLO (Probable Septin-7 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRU9_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 1.460e-22
Identity = 60/175 (34.29%), Postives = 93/175 (53.14%), Query Frame = 1
Query:   40 DGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSK-VDEPQGDLIRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVT 561
            D R DV ++FIA HR +P+D+++M QL+  V V+PV+ K+DSMTV+E++ F+  + D  A                E L   G          R  PP+A+++S  +D   G     P RRYPWGTC  + + HS+   L+ LL E G+++LK     RY  +  +Q  ++ + T
Sbjct:  264 DSRVDVALFFIAPHRLRPLDLDFMVQLADLVPVVPVLAKADSMTVEELRDFRRHVQDALAHAGRAHKKDLLHAFSEEALDAAG--------ARRDAPPFAIVASTTMDLSVGRFW--PVRRYPWGTCEALSSVHSDVGALKRLLFEEGYEELKAATEERYYHYRSQQLLNLDDPT 428          
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Match: I0Z2V6_COCSC (Septin-type G domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z2V6_COCSC)

HSP 1 Score: 106 bits (265), Expect = 4.920e-22
Identity = 63/179 (35.20%), Postives = 95/179 (53.07%), Query Frame = 1
Query:    7 EVRRGNE-TPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVIGKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVTPSWLGERQPPPYAVISSK-VDEPQGDLIRNPARRYPWGTCRVMETTHSENTYLQCLLLEVGFQDLKDEMTARYRAFVEKQ 537
            + +R N  T   D R DV ++FIA HR +PIDI++M QL+  V V+PV+ K+DSMTV+E++ F+  + +  A   +            E L   G          R  PP+AV++S  +D   G     P R+YPWGTC  + + HS+   L+ LL E G+++LK     RY  +  +Q
Sbjct:  251 DAKRANPLTKFTDSRVDVALFFIAPHRLRPIDIDFMAQLADLVPVVPVLAKADSMTVEELRDFRRHVQEQLAHAGKKHKKDLLHAFSEEALDAAG--------ARRDAPPFAVVASTTMDLSVGRFW--PVRKYPWGTCEALSSVHSDVGALKRLLFEEGYEELKAATEDRYYHYRSQQ 419          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16667.4778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBY2_9PHAE1.290e-19991.29Septin-type G domain-containing protein n=1 Tax=Ec... [more]
D8LDE4_ECTSI1.650e-18286.38Sept1, septin GTPase n=1 Tax=Ectocarpus siliculosu... [more]
D7FUI7_ECTSI6.270e-16077.74Sept3, septin GTPase n=1 Tax=Ectocarpus siliculosu... [more]
D7FUI5_ECTSI6.490e-9657.05Sept5, septin GTPase, incomplete sequence n=1 Tax=... [more]
D8LDE5_ECTSI6.700e-9054.85Sept2, septin GTPase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JEJ7_9PHAE3.000e-8952.68Septin-type G domain-containing protein n=1 Tax=Ec... [more]
I2CR08_NANGC2.320e-2639.88Sporulation-regulated protein 3 (Fragment) n=1 Tax... [more]
A0A4D9CXY9_9STRA4.610e-2639.88Septin-type G domain-containing protein n=1 Tax=Na... [more]
A0A8J9WRU9_9CHLO1.460e-2234.29Probable Septin-7 n=1 Tax=Coccomyxa sp. Obi TaxID=... [more]
I0Z2V6_COCSC4.920e-2235.20Septin-type G domain-containing protein n=1 Tax=Co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16667contigEcto-sp13_S_contig16667:3..3681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score518.8
Seed ortholog evalue1.7e-144
Seed eggNOG ortholog2880.D8LDE4
Model size927
KEGG koko:K16944
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.ATPase. Has a role at an early stage in the morphogenesis of the spore coat
EggNOG OGsCOG5019@1,KOG1547@2759
Ec32 ortholog descriptionSept1, septin GTPase
Ec32 orthologEc-15_000930.1
Cds size927
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16667.4778.1prot_Ecto-sp13_S_contig16667.4778.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16667 3..3681 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462873.9649804-CDS-Ecto-sp13_S_contig16667:2..611681462873.9649804-CDS-Ecto-sp13_S_contig16667:2..61Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 3..61 +
1681462873.9765832-CDS-Ecto-sp13_S_contig16667:354..4211681462873.9765832-CDS-Ecto-sp13_S_contig16667:354..421Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 355..421 +
1681462873.9859574-CDS-Ecto-sp13_S_contig16667:718..8451681462873.9859574-CDS-Ecto-sp13_S_contig16667:718..845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 719..845 +
1681462873.9972148-CDS-Ecto-sp13_S_contig16667:1071..12161681462873.9972148-CDS-Ecto-sp13_S_contig16667:1071..1216Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 1072..1216 +
1681462874.0067582-CDS-Ecto-sp13_S_contig16667:1764..19031681462874.0067582-CDS-Ecto-sp13_S_contig16667:1764..1903Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 1765..1903 +
1681462874.0180607-CDS-Ecto-sp13_S_contig16667:2600..27801681462874.0180607-CDS-Ecto-sp13_S_contig16667:2600..2780Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 2601..2780 +
1681462874.0262268-CDS-Ecto-sp13_S_contig16667:2991..30871681462874.0262268-CDS-Ecto-sp13_S_contig16667:2991..3087Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 2992..3087 +
1681462874.0344794-CDS-Ecto-sp13_S_contig16667:3567..36811681462874.0344794-CDS-Ecto-sp13_S_contig16667:3567..3681Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16667 3568..3681 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16667.4778.1

>prot_Ecto-sp13_S_contig16667.4778.1 ID=prot_Ecto-sp13_S_contig16667.4778.1|Name=mRNA_Ecto-sp13_S_contig16667.4778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp
LAEVRRGNETPEKDGRTDVCIYFIAAHRCKPIDIEYMKQLSKAVAVIPVI
GKSDSMTVDEMKVFKAAIVDLAAQDNELKFFQFSETSWNECLTTLGFTVT
PSWLGERQPPPYAVISSKVDEPQGDLIRNPARRYPWGTCRVMETTHSENT
YLQCLLLEVGFQDLKDEMTARYRAFVEKQTRSITEVTAGVIKSLPRRASN
AALNVAHEAQGRRPKSVLALTMAAVCALAAVMLAYFVCGVHGTPPILGGE
GMFNPPEGLANWAKVIEKIQELEDWDRILAADSGEEHLDVLIDVLMKYYK
NAELRNKAQ
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mRNA from alignment at Ecto-sp13_S_contig16667:3..3681+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16667.4778.1 ID=mRNA_Ecto-sp13_S_contig16667.4778.1|Name=mRNA_Ecto-sp13_S_contig16667.4778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3679bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16667:3..3681+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGCGGAAGTGAGGAGGGGCAACGAGACTCCGGAGAAGGACGGCAGGAC GGACGTCTGGTGAGAGAAGCAAGTACTACGGTCTGTTCCGACAATATAAT AAGGGACACCATTTTTTTTGGATTGCTGGCCGCTTCCTATCCTGTCTGTT TCATGTCATCAACGCTCCTCTTTGTGCGTCAAACAATTGGACGCTGTACG AGACAATCCTTGTCTGAAACCGACATACCGTCGCGGAGAGTGATCGTTTT AGACACCTGTAACGTGGGTCGCTACTGCTAGTCGTGTCACGGCTGCTTTG GGGTTGGCCGCATGTTGACTACTAAACGCTCGTTGTTTTTGTGCGATGGC AGCATATACTTCATTGCTGCTCATCGGTGCAAGCCCATCGACATCGAGTA CATGAAGCAGCTCTCCAAGGTACGGTCGGGGCTCCGTGAAGGTATTCGAT TGAACGATCGCAGTCAGTTTATACAGCCAAAGCACGTTTGGCGCAGCAGA GTAGTCACCCGGCGTAATGTGGCCGTCAAGAAGATGCATCTTGTCTAGAA TACTCTGCTGCGGTCGCTTCGCGAGGGTCATCACGAGATCTCTAACCTCC TGTTCCGTGTAATATGTACAGTACTTGATTCTGGGGATCGAACTGACGTT GCCGCGGTGGTCTGGTCGTCGCGGGCGGCATCGTGCTGTGATATTTTGCT CACCCCGCTTTCTCAGGCTGTGGCTGTAATCCCCGTGATCGGTAAATCCG ACAGCATGACGGTGGACGAGATGAAAGTCTTCAAGGCGGCCATCGTTGAC CTTGCTGCTCAAGACAATGAGCTCAAGTTTTTTCAGTTCTCAGGTGCGTG GATCTAAAGAGTAGTCTTGTCTCAGGTCAGCGGCAACTCAATCCCGCCAC AAGTGGTTCCTGGTTTTGTTTCTTCCATTCACGTCCTGGGCGGCAGAATA TCCGGCAATGCGCGAAGCCAATGTTTTTTTTGGTACCTGCGTTTTCTATT TTTTACTCTGTGCTTCAAGGTACTTACAACTCCAACCCTCTGTCCGAACC CTTCCCGCGACCCAATCAGAGACGTCGTGGAATGAATGCCTCACAACCCT CGGATTCACTGTCACACCCAGCTGGCTGGGCGAAAGGCAGCCGCCCCCTT ACGCCGTAATCTCGAGCAAGGTGGACGAGCCCCAAGGGGACCTGATCCGT AACCCCGCACGAAGGTAGGTCGTGTGACCTCCGGGCCGTCACGGTTTTGA CAAAATATATAAGCCAGATCATGGGATGTGCCCTCTTCCATGACAACAAT ATTTTTTCTGCACATCGGTCCTTTCATCTTCGCGATGGTTTCTTGACGTA CCACCAGACACACAAAAGGGGAAGGCCGCACAGGAGCTTTGATCCCCTCC CCTCTACAATGCTTGCCTGAAATATCGTCTCGGGAAGCATGCAGCCGTTA GTTTCCCTCGTGGACCAAGTACACGAATCATTGCACACGCACGAAACATC GCTCTCCCTTTTGTATGGGCATATTGTGAAAAAAGTCCAAGTTCGCGTGA CCGCGCCGAGTTGCGAGCCCACGTACCGAACGTCAGAAGGATTAGAGGTT ACCTGCTGAACCACTCAGCCAGTATTGCTTTAGTTGACCGAACAATGTAG ACAAAAATCCGATTATTTGTGGTTTTTTAGGAAATCGCGAATGTTCTCGT TACACTAGCCATTCTATAAATCTACCACAATTCAACGCTCGCCAATTCGA TACACATGATAGGTACCCGTGGGGCACCTGCCGCGTCATGGAAACGACGC ACAGCGAAAATACCTACCTCCAATGTCTTTTGCTGGAGGTGGGCTTCCAG GACTTGAAGGACGAGATGACGGCGCGCTACAGAGCTTTCGTTGAAAAGCA GGTGCCCGAATAAATTAAGTGTAGAAACTCCCAAGGTGATACCTGCTCAA GGTTGCACTGACACGTGGACCACACCGTTTCTGCAACCGTCCCAGTATCA ATCGACGCTGTTTCAGAAACGTTTAACAGACATCCTAGACTAGACCCAAC AAAGAATAGAAGAGTCCAGAATTACGGAGAGGATATTTGAGGGGAAATGA AAGAAAGGAATGACTTTTTGATATGTTTTCCTGAATCAGGGAAGTGACAA ACGAAAGACACCAAAAGCACAAGTAAGAGATTACCAATACATACTGTGGT ATGCGATGCATCTGTCTGGGGCGGAAAGACGAACGTGTCGAGCCAGCTCC GCTTCAGACCACACGTGTGAGATCGCCACACGACAATACGAAATTCTCGC CACCAAACATTGTCGACACTTTGTAGACCAACTCGGACAGTACACGCTTA CGCAGATCATGAATCTTGCCTATATGAGATGTTGTCCCTCCAGTTGTTTT AGTATCAAGTGTTGCAAACATCCTCAATTGGGGCGACATGATGTAGGACT ACATATCCATGAGATGGTTTCTACATCATCACCCTCGTGTTCATTGAAGC GGTTCTGTGTCGCCAGGGCGTGTAGGGTTGAATGGCCAGAGGGTGAGATA CTAATATCCCATTCTAATGTCCAGAATTTTGTGCTATTGCATTTCCAGAC AAGGTCTATCACGGAGGTTACCGCCGGCGTTATCAAAAGCCTTCCTCGCC GGGCCTCGAACGCCGCTCTCAATGTTGCTCACGAGGCTCAAGGTCGCCGT CCCAAGTCCGTTCTGGCCCTGACGATGGCCGCGGTCTGCGCCTTGGCCGC GGTGATGCTGGCGTATTTTGTTTGCGGGGTGAGACGCTGTGATGCACTTT TCCGATACCTGTCCCATCGTATGTGGGTACTAAGAGAATCCTGGTCGCCA AGGACATGGTAGGAGAGTATTTCTCGTTGGAAAGGCACTTCTCTTCTCTT CTCCAGTCTCCCTGTTTTTTTCACAGTAGTTTGCGTGAAGCGCCGTGCCC CTTGGGTAATCATATGTACTTGGCTCGTCAACGGTACAGGTCCACGGCAC CCCCCCGATCTTGGGGGGAGAAGGCATGTTCAACCCTCCCGAGGGCCTGG CCAACTGGGCCAAAGTCATCGAAAAAATTCAGGAGGTGAGCTATCGAGTA TGTTTACGCGTTTGGTCAGGAAAGACGCACGTTGCAACAAGCTGGCGCCA TGTACATACGAGCTGGTTTGTCGCCAGAGACAAACCTGCCCCTGAAGATG GTATCGATCCTGAAAGCTAAGTTGTTTCTGGTCGTAGGTGAAACAAACTG ACGTTTACGGTTAATCGGAAGGATTTCCAGAAAAACACACATGCAGACTA ATTGCATCGTCGTTGGAAGCCGATGTTACGGAGAACATATTCCGAGCACG TACGTATATCGTATGTCGTGACGCTTGAGAGCATGAGAGAGGAAGTAAGG AATAGTGTGTGAGCACGCTGAAAGGTAGACGCATTGGCCAGCATTGAGAA GTGGTCATAAAGTAGTCTTATTTCGTACCATGCACCTGCAGGCTTAGTCA GCCTACTCAGCGTCCGAAAATTCAATGATTCATCGGTGTTTCCACTCGAC GTTACGAAGTTGCAGCTCGAAGATTGGGACCGCATTTTGGCGGCGGACTC CGGCGAGGAGCACCTGGACGTCCTCATCGATGTGCTCATGAAGTACTACA AGAACGCAGAGTTGCGCAACAAGGCACAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16667:3..3681+

>mRNA_Ecto-sp13_S_contig16667.4778.1 ID=mRNA_Ecto-sp13_S_contig16667.4778.1|Name=mRNA_Ecto-sp13_S_contig16667.4778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=927bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16667:3..3681+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGCGGAAGTGAGGAGGGGCAACGAGACTCCGGAGAAGGACGGCAGGAC
GGACGTCTGCATATACTTCATTGCTGCTCATCGGTGCAAGCCCATCGACA
TCGAGTACATGAAGCAGCTCTCCAAGGCTGTGGCTGTAATCCCCGTGATC
GGTAAATCCGACAGCATGACGGTGGACGAGATGAAAGTCTTCAAGGCGGC
CATCGTTGACCTTGCTGCTCAAGACAATGAGCTCAAGTTTTTTCAGTTCT
CAGAGACGTCGTGGAATGAATGCCTCACAACCCTCGGATTCACTGTCACA
CCCAGCTGGCTGGGCGAAAGGCAGCCGCCCCCTTACGCCGTAATCTCGAG
CAAGGTGGACGAGCCCCAAGGGGACCTGATCCGTAACCCCGCACGAAGGT
ACCCGTGGGGCACCTGCCGCGTCATGGAAACGACGCACAGCGAAAATACC
TACCTCCAATGTCTTTTGCTGGAGGTGGGCTTCCAGGACTTGAAGGACGA
GATGACGGCGCGCTACAGAGCTTTCGTTGAAAAGCAGACAAGGTCTATCA
CGGAGGTTACCGCCGGCGTTATCAAAAGCCTTCCTCGCCGGGCCTCGAAC
GCCGCTCTCAATGTTGCTCACGAGGCTCAAGGTCGCCGTCCCAAGTCCGT
TCTGGCCCTGACGATGGCCGCGGTCTGCGCCTTGGCCGCGGTGATGCTGG
CGTATTTTGTTTGCGGGGTCCACGGCACCCCCCCGATCTTGGGGGGAGAA
GGCATGTTCAACCCTCCCGAGGGCCTGGCCAACTGGGCCAAAGTCATCGA
AAAAATTCAGGAGCTCGAAGATTGGGACCGCATTTTGGCGGCGGACTCCG
GCGAGGAGCACCTGGACGTCCTCATCGATGTGCTCATGAAGTACTACAAG
AACGCAGAGTTGCGCAACAAGGCACAG
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